FC930724

Overview
NameFC930724
Unique NameFC930724
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC930724_ssr73 microsatellite FC930724_ssr73:73..88. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig15208 contig Ccv1_Contig15208:1..718. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYG_TOBAC (Pyruvate kinase isozyme G, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.843e-20
Identity = 59/137 (43.07%), Postives = 83/137 (60.58%), Query Frame = 2
Query:  302 KTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQI---LCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLS 703
            KTKIVCT+GP++ S  M+ KL  AGMNVAR N SHG H   Q T++ ++   +N Q    + A+MLDTKGPE+ +G +   KPI LKEGQE   S        E+ ++++Y     DV+ G+ +L   G ++L V S
Sbjct:   92 KTKIVCTIGPSTSSREMIWKLAEAGMNVARLNMSHGDHASHQRTIDLVKE--YNAQFEDKVIAIMLDTKGPEVISGDVP--KPILLKEGQEFNFSIKRGV-STEDTVSVNYDDFINDVEAGDILLVDGGMMSLAVKS 223          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_YARLI (Pyruvate kinase OS=Yarrowia lipolytica GN=PYK1 PE=3 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 1.024e-19
Identity = 54/145 (37.24%), Postives = 82/145 (56.55%), Query Frame = 2
Query:  275 DVPNDKRLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQ-ILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKG--NEEMITMSYKKLPVDVKPGNTILCADGTITLTVL 700
            D+P  K   K+ I+ T+GP + S  M+ KL +AG+N+ R NFSHG++EY Q  + N R +    Q    A+ LDTKGPEIRTG  KD K   +K G  +  ST+  +K   +++++ + Y  +   +  G  I   DG ++  VL
Sbjct:   23 DIPT-KNYRKSSIIGTIGPNTNSAEMISKLRQAGLNIVRMNFSHGSYEYHQSVIENARESEQQFQGRPLAIALDTKGPEIRTGVTKDDKDWDVKAGHVMLFSTNPKYKDQCDDKIMYIDYTNIVKQIDIGKIIFVDDGVLSFKVL 166          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_THELI (Pyruvate kinase (Fragment) OS=Thermococcus litoralis GN=pki PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.892e-19
Identity = 51/132 (38.64%), Postives = 82/132 (62.12%), Query Frame = 2
Query:  302 KTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTV 697
            KTKI+ T+GPAS+    ++K+++AGM+VAR NFSHGT E   +T+  +R      +   A++ D  G ++R G +K G  + L++G ++ ++T  D +G+E  I + +K LP  V  G+TI  +DG I L V
Sbjct:   11 KTKIIATIGPASKQKESIKKMIKAGMSVARINFSHGTLEEHAKTIETVRDVAEKLERRVAILGDLPGLKMRVGKIK-GDSVTLRKGDKVVLTT-RDIEGDETTIPVEFKDLPKLVSKGDTIYLSDGYIMLRV 140          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_DEBHA (Pyruvate kinase OS=Debaryomyces hansenii GN=PYK1 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.671e-19
Identity = 52/142 (36.62%), Postives = 86/142 (60.56%), Query Frame = 2
Query:  287 DKRLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAA--MHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTD--YDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVL 700
            DK L ++ I+ T+GP + +V +L KL +AG+N+ R NFSHG++EY Q  ++N + +  ++  + L A+ LDTKGPEIRTG   D K   +    E+  +TD  Y  K +++++ + YK +   ++ G  I   DG ++  VL
Sbjct:   19 DKVLRRSSIIGTIGPKTNNVDVLVKLRKAGLNIVRMNFSHGSYEYHQSVIDNAKQSEEIYKGRPL-AIALDTKGPEIRTGTTIDDKDYPILPNHEMIFTTDEAYAKKCDDKVMFIDYKNITKVIEAGKIIYIDDGVVSFEVL 159          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_BUCAI (Pyruvate kinase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=pykA PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.932e-18
Identity = 55/138 (39.86%), Postives = 82/138 (59.42%), Query Frame = 2
Query:  293 RLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIR-TGFLKDGKPIQLKEGQEITVSTDYD-FKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVL 700
            RL +TKIV TLGP++     LEK++R+G+NV RFNFSHG+ +  +   N  R  M       A++ D +GP+IR + F+K+   I L  G    +  + D   GN+E + + YK+LP D+K G+ +L  DG I L V+
Sbjct:    4 RLRRTKIVATLGPSTDINNNLEKIIRSGVNVLRFNFSHGSKDEHKSRANQAREIMTRLNFHIALLGDLQGPKIRISKFIKNN--IFLNVGDFFILDANLDQNNGNQERVGIDYKQLPYDLKVGDVLLLDDGRIQLKVI 139          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_LEIBR (Pyruvate kinase (Fragment) OS=Leishmania braziliensis PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.587e-18
Identity = 41/70 (58.57%), Postives = 55/70 (78.57%), Query Frame = 2
Query:  311 IVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTG 520
            IVCT+GP+++SV  L+ L+++GM+VAR NFSHG+HEY Q T+NN+R A     +  A+ LDTKGPEIRTG
Sbjct:   22 IVCTIGPSTQSVEALKGLIKSGMSVARMNFSHGSHEYHQTTINNVRQAAAELGVNIAIALDTKGPEIRTG 91          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK2_CANGA (Pyruvate kinase 2 OS=Candida glabrata GN=PYK2 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.136e-17
Identity = 52/148 (35.14%), Postives = 82/148 (55.41%), Query Frame = 2
Query:  275 DVPNDKRLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQIL----CAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTD--YDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVL 700
            +V   K + KT I+ T+GP + +V  L  L +AG+N+ R NFSHG++EY Q  ++N R    + Q+      A+ LDTKGPEIRTG   D     +    E+  +TD  Y    +++++ + YK +   ++PG  I   DG ++  VL
Sbjct:   12 EVTPGKDVRKTAIIGTIGPKTNNVDTLVALRKAGLNIVRMNFSHGSYEYHQSVIDNAR---KSEQVYPGRPLAIALDTKGPEIRTGTNVDDVDYPIPPNHEMIFTTDDKYAKACDDKIMYVDYKNITKVIQPGKVIYVDDGVLSFEVL 156          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK2_SALTY (Pyruvate kinase II OS=Salmonella typhimurium GN=pykA PE=3 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 2.789e-17
Identity = 53/138 (38.41%), Postives = 79/138 (57.25%), Query Frame = 2
Query:  290 KRLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDY-DFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVL 700
            +RL +TKIV TLGPA+     LEK++ AG NV R NFSHG+ E  +   + +R          A++ D +GP+IR    K+GK + L  G +  +  +    +G++E + + YK LP DV PG+ +L  DG + L VL
Sbjct:    3 RRLRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSPEDHKMRADKVREIAAKLGRHVAILGDLQGPKIRVSTFKEGK-VFLNIGDKFLLDANLGKGEGDKEKVGIDYKGLPADVVPGDILLLDDGRVQLKVL 139          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK2_ECOLI (Pyruvate kinase II OS=Escherichia coli (strain K12) GN=pykA PE=1 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 2.789e-17
Identity = 53/138 (38.41%), Postives = 79/138 (57.25%), Query Frame = 2
Query:  290 KRLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDY-DFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVL 700
            +RL +TKIV TLGPA+     LEK++ AG NV R NFSHG+ E  +   + +R          A++ D +GP+IR    K+GK + L  G +  +  +    +G++E + + YK LP DV PG+ +L  DG + L VL
Sbjct:    3 RRLRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSPEDHKMRADKVREIAAKLGRHVAILGDLQGPKIRVSTFKEGK-VFLNIGDKFLLDANLGKGEGDKEKVGIDYKGLPADVVPGDILLLDDGRVQLKVL 139          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_KLULA (Pyruvate kinase OS=Kluyveromyces lactis GN=PYK1 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.643e-17
Identity = 52/151 (34.44%), Postives = 82/151 (54.30%), Query Frame = 2
Query:  263 GLLRDVPNDK--RLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQ-ILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTD--YDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVL 700
            G L D+  +    L +T I+CT+GP + +   L +L +AGMN+ R NFSHG++EY Q  ++N R +    Q    A+ LDTKGPEIRTG   +     +    E+  +TD  Y    +++ + + YK +   ++ G  I   DG ++  VL
Sbjct:    6 GWLTDLSTETGTNLRRTSIICTIGPKTNNPETLVELRKAGMNIVRMNFSHGSYEYHQSVIDNARKSEELYQGRPLAIALDTKGPEIRTGTTTNDVDYPIPPNHEMIFTTDDKYAKACDDKTMYVDYKNITKVIEAGRIIYVDDGVLSFEVL 156          
The following BLAST results are available for this feature:
BLAST of FC930724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
KPYG_TOBAC7.843e-2043.07Pyruvate kinase isozyme G, chloroplastic OS=Nicoti... [more]
KPYK_YARLI1.024e-1937.24Pyruvate kinase OS=Yarrowia lipolytica GN=PYK1 PE=... [more]
KPYK_THELI3.892e-1938.64Pyruvate kinase (Fragment) OS=Thermococcus litoral... [more]
KPYK_DEBHA8.671e-1936.62Pyruvate kinase OS=Debaryomyces hansenii GN=PYK1 P... [more]
KPYK_BUCAI1.932e-1839.86Pyruvate kinase OS=Buchnera aphidicola subsp. Acyr... [more]
KPYK_LEIBR9.587e-1858.57Pyruvate kinase (Fragment) OS=Leishmania brazilien... [more]
KPYK2_CANGA2.136e-1735.14Pyruvate kinase 2 OS=Candida glabrata GN=PYK2 PE=3... [more]
KPYK2_SALTY2.789e-1738.41Pyruvate kinase II OS=Salmonella typhimurium GN=py... [more]
KPYK2_ECOLI2.789e-1738.41Pyruvate kinase II OS=Escherichia coli (strain K12... [more]
KPYK_KLULA3.643e-1734.44Pyruvate kinase OS=Kluyveromyces lactis GN=PYK1 PE... [more]

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Properties
Property NameValue
Genbank descriptionC34010F03EF PostHarvC1 Citrus clementina cDNA clone C34010F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930724 ID=FC930724; Name=FC930724; organism=Citrus clementina; type=EST; length=716bp
GACTAGTAACCAGTCAGGTACGCCCCTCACTCTCGTCTGAGTTTATACAA
TTTAGTGATTTACTAATAAATGAATAAATAAATAAATAAAAGGCAGAAAC
GAATAATTACAAGTAAAAATCAGAATTAGACACTGGCATTTAGCGCCGTG
GAGAAGCAAAGGTGTGCCAGCGAACAGCTGTTCTGTTGGGGTAACTGACT
GATATATTCGTTATTGTGAACTAGACTTGATAAGGTAAGCTATGGCGAAC
ATAGATATAGAGGGACTCTTGAGAGATGTGCCAAATGATAAGCGGTTGCC
GAAGACGAAGATTGTGTGTACTTTAGGTCCTGCTTCCCGTTCTGTGCCGA
TGCTTGAGAAGCTTCTGAGGGCTGGAATGAATGTTGCTCGTTTCAATTTC
TCTCACGGTACGCACGAGTATCAGCAGGAGACTTTGAACAATCTCAGAGC
TGCCATGCACAACACCCAGATCCTCTGTGCTGTCATGCTCGATACCAAGG
GACCTGAGATTCGAACTGGTTTCCTTAAGGATGGAAAACCCATACAACTT
AAAGAAGGTCAGGAAATTACTGTATCTACTGATTATGACTTCAAGGGTAA
TGAAGAAATGATCACCATGAGCTACAAGAAGCTGCCTGTGGATGTGAAGC
CTGGAAATACCATCTTGTGTGCTGATGGCACCATTACCCTGACTGTCTTG
TCTTGTGATCCAAATC
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