FC930724

Overview
NameFC930724
Unique NameFC930724
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK1_CANGA (Pyruvate kinase 1 OS=Candida glabrata GN=PYK1 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.296e-14
Identity = 46/141 (32.62%), Postives = 79/141 (56.03%), Query Frame = 2
Query:  290 KRLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAA--MHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTD--YDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVL 700
            + L +T I+ T+GP + +   L  L +AG+N+ R NFSHG++EY +  ++N R +  ++  + L A+ LDTKGPEIRTG   +     +    E+  +TD  Y    +++++ + YK +   +  G  I   DG ++  VL
Sbjct:   17 EELRRTSIIGTIGPKTNNPETLVALRKAGLNIVRMNFSHGSYEYHKSVIDNARKSEELYPGRPL-AIALDTKGPEIRTGTTTNEVDYPIPPNHEMIFTTDDKYAKACDDKIMYLDYKNITKVISAGRIIYVDDGVLSFEVL 156          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK1_YEAST (Pyruvate kinase 1 OS=Saccharomyces cerevisiae GN=PYK1 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.692e-14
Identity = 46/139 (33.09%), Postives = 78/139 (56.12%), Query Frame = 2
Query:  296 LPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAA--MHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTD--YDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVL 700
            L +T I+ T+GP + +   L  L +AG+N+ R NFSHG++EY +  ++N R +  ++  + L A+ LDTKGPEIRTG   +     +    E+  +TD  Y    +++++ + YK +   +  G  I   DG ++  VL
Sbjct:   18 LRRTSIIGTIGPKTNNPETLVALRKAGLNIVRMNFSHGSYEYHKSVIDNARKSEELYPGRPL-AIALDTKGPEIRTGTTTNDVDYPIPPNHEMIFTTDDKYAKACDDKIMYVDYKNITKVISAGRIIYVDDGVLSFQVL 155          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_SACCA (Pyruvate kinase OS=Saccharomyces castellii GN=PYK1 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.210e-14
Identity = 47/139 (33.81%), Postives = 76/139 (54.68%), Query Frame = 2
Query:  296 LPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAA--MHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTD--YDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVL 700
            L +T I+ T+GP + +  +L  L +AG+N+ R NFSHG++EY Q  + N R +  ++  + L A+ LDTKGPEIRTG         +    E+  STD  Y    +++++ + Y  +   +  G  I   DG ++  VL
Sbjct:   19 LRRTSIIGTIGPKTNNPEVLVALRKAGLNIVRMNFSHGSYEYHQSVIENARKSEELYPGRPL-AIALDTKGPEIRTGTTTGEVDYPIPPNHEMIFSTDEKYAKACDDKVMFVDYANITKVISKGKIIYVDDGVLSFEVL 156          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_BUCBP (Pyruvate kinase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=pykA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.444e-13
Identity = 46/138 (33.33%), Postives = 72/138 (52.17%), Query Frame = 2
Query:  290 KRLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLS 703
            +R  +TKIV TLGP++ +  +LE ++++G+NV R NFSHGT E        + +         A++ D +GP+IR    +D K         I  +   +  G  E + + YK LP DVK  + +L  DG I L V++
Sbjct:    3 RRFRRTKIVATLGPSTDNHIILENMIKSGVNVFRLNFSHGTREEHIYRAKLVTSIAKRLNCHIALLGDLQGPKIRICKFQDKKVFLKVNNYFILDANLNENLGTSERVGIDYKNLPKDVKKCDILLLDDGKIQLKVIN 140          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_ENCCU (Pyruvate kinase OS=Encephalitozoon cuniculi GN=PYK1 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.110e-13
Identity = 49/141 (34.75%), Postives = 77/141 (54.61%), Query Frame = 2
Query:  293 RLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEI--RTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCD 709
            R+  TKIVCT+GP + S   +++L+ AGM++AR NFSHG+ E   E + N+R +        ++ LDT+GPE+  RT  +KD K     EG E+   +    + +  +  +  K L VD    N +   DG I L V++ +
Sbjct:   93 RMVLTKIVCTIGPRTSSREKIKELIDAGMSIARLNFSHGSREAHLEVIRNIRDSRSGAGRHVSIALDTRGPEVRLRTPEMKDIK----VEGGEVLRFSLLSSEKDIWIPGVDLKSLGVD----NRVFIDDGAIELRVVNVE 225          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK2_AGRVI (Pyruvate kinase OS=Agrobacterium vitis GN=ttuE PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.702e-12
Identity = 47/135 (34.81%), Postives = 69/135 (51.11%), Query Frame = 2
Query:  302 KTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEM--ITMSYKKLPVDVKPGNTILCADGTITLTVL 700
            ++KIV T+GPAS S  ML  L  AG++  R NFSHG      E   N+RA         AV+ D +GP+IR G L  G+ + L  G   T+      +G E M  I + ++++     PG  +L  DG I + ++
Sbjct:    8 RSKIVATVGPASSSPDMLRSLFLAGVDTFRLNFSHGARADHAEVYRNIRALEQEHDAAIAVLQDLQGPKIRIGVLAHGR-LDLARGS--TIGFILGREGGEGMNDIPLPHREIFEVAVPGMDLLIDDGRIKVRIM 139          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_METEA (Pyruvate kinase OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=pyk PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 6.019e-12
Identity = 44/136 (32.35%), Postives = 71/136 (52.21%), Query Frame = 2
Query:  290 KRLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTV 697
            KR  +TKIV TLGPAS +  M+EKL  AG +V R N SH   E   E +  +R      +    +++D +GP++R G    G    L+ GQ   + +D    G+ + + + + ++   ++P + IL  DG + L V
Sbjct:    2 KRSRRTKIVATLGPASDTPEMIEKLFHAGADVFRINMSHLAREKLPERIEVIRTIEREAKRPIGILVDLQGPKLRLGTFV-GDAAVLENGQTFVLDSD-PTPGDTDRVFLPHPEILSALEPSHGILIDDGKLRLIV 135          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK1_AGRVI (Pyruvate kinase OS=Agrobacterium vitis GN=ttuE PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.861e-12
Identity = 42/133 (31.58%), Postives = 69/133 (51.88%), Query Frame = 2
Query:  302 KTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVL 700
            + KIV T+GPAS S  +L  L  AG++  R NFSHG+ +       ++RA          ++ D +GP+IR G L +G+ +QL +  EI      +       I + ++++   VKPG+ +L  DG + +  L
Sbjct:    8 RAKIVATVGPASSSPAILRSLFLAGVDTFRLNFSHGSRDDHAAAYRHIRALEKELGTSIGILQDLQGPKIRIGVLHEGR-LQLTKDAEIRFVCGTEPGRGLMDIPLPHREIFAAVKPGDDLLIDDGRVRVRAL 139          
BLAST of FC930724 vs. ExPASy Swiss-Prot
Match: KPYK_MYCGE (Pyruvate kinase OS=Mycoplasma genitalium GN=pyk PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.901e-11
Identity = 51/162 (31.48%), Postives = 77/162 (47.53%), Query Frame = 2
Query:  296 LPKTKIVCTLGPASR----SVPML----------------EKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMS----YKKLPVDVKPGNTILCADGTITLTVLSCD 709
            L +TKI+ T GPA      S+ ML                E ++++G++V R NFSHGTHE QQ  +  +R       I  ++MLDT GPEIR    K  + +++ +  E+ ++T      ++    +S       +  DV  G  IL  DG +TL V   D
Sbjct:    5 LKRTKIIATCGPALTKSLVSLKMLDDNEYAAIKKVAYANIEAIIKSGVSVIRLNFSHGTHEEQQVRIKIVRDVAKAMNIPVSIMLDTNGPEIRIVETKK-EGLKITKDSEVIINTMSKMIASDNQFAVSDASGKYNMVNDVNIGQKILVDDGKLTLVVTRVD 165          
The following BLAST results are available for this feature:
BLAST of FC930724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
KPYK1_CANGA1.296e-1432.62Pyruvate kinase 1 OS=Candida glabrata GN=PYK1 PE=3... [more]
KPYK1_YEAST1.692e-1433.09Pyruvate kinase 1 OS=Saccharomyces cerevisiae GN=P... [more]
KPYK_SACCA2.210e-1433.81Pyruvate kinase OS=Saccharomyces castellii GN=PYK1... [more]
KPYK_BUCBP2.444e-1333.33Pyruvate kinase OS=Buchnera aphidicola subsp. Baiz... [more]
KPYK_ENCCU7.110e-1334.75Pyruvate kinase OS=Encephalitozoon cuniculi GN=PYK... [more]
KPYK2_AGRVI2.702e-1234.81Pyruvate kinase OS=Agrobacterium vitis GN=ttuE PE=... [more]
KPYK_METEA6.019e-1232.35Pyruvate kinase OS=Methylobacterium extorquens (st... [more]
KPYK1_AGRVI7.861e-1231.58Pyruvate kinase OS=Agrobacterium vitis GN=ttuE PE=... [more]
KPYK_MYCGE3.901e-1131.48Pyruvate kinase OS=Mycoplasma genitalium GN=pyk PE... [more]

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Properties
Property NameValue
Genbank descriptionC34010F03EF PostHarvC1 Citrus clementina cDNA clone C34010F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930724 ID=FC930724; Name=FC930724; organism=Citrus clementina; type=EST; length=716bp
GACTAGTAACCAGTCAGGTACGCCCCTCACTCTCGTCTGAGTTTATACAA
TTTAGTGATTTACTAATAAATGAATAAATAAATAAATAAAAGGCAGAAAC
GAATAATTACAAGTAAAAATCAGAATTAGACACTGGCATTTAGCGCCGTG
GAGAAGCAAAGGTGTGCCAGCGAACAGCTGTTCTGTTGGGGTAACTGACT
GATATATTCGTTATTGTGAACTAGACTTGATAAGGTAAGCTATGGCGAAC
ATAGATATAGAGGGACTCTTGAGAGATGTGCCAAATGATAAGCGGTTGCC
GAAGACGAAGATTGTGTGTACTTTAGGTCCTGCTTCCCGTTCTGTGCCGA
TGCTTGAGAAGCTTCTGAGGGCTGGAATGAATGTTGCTCGTTTCAATTTC
TCTCACGGTACGCACGAGTATCAGCAGGAGACTTTGAACAATCTCAGAGC
TGCCATGCACAACACCCAGATCCTCTGTGCTGTCATGCTCGATACCAAGG
GACCTGAGATTCGAACTGGTTTCCTTAAGGATGGAAAACCCATACAACTT
AAAGAAGGTCAGGAAATTACTGTATCTACTGATTATGACTTCAAGGGTAA
TGAAGAAATGATCACCATGAGCTACAAGAAGCTGCCTGTGGATGTGAAGC
CTGGAAATACCATCTTGTGTGCTGATGGCACCATTACCCTGACTGTCTTG
TCTTGTGATCCAAATC
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