FC930726
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930726 vs. ExPASy Swiss-Prot
Match: RL10_SULIL (50S ribosomal protein L10e OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.701e-23 Identity = 64/167 (38.32%), Postives = 93/167 (55.69%), Query Frame = 2 Query: 149 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYGVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKD-AFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV-AIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKI 643 M RP RCYR Y + + G+P PKI + G ++ + V L++ E + ALEA R K + K G + +F + + +P HVLR NKM++ AGADRLQ GMR +FG P GT AR+ +G++L+ V+ K + A+EAL+ A K P R +I Sbjct: 1 MPLRPGRCYRHFSGPAYTRKEYIPGIPQPKITKFTSGNPN---GDYDYEVRLITTEIGQIRHNALEAVRTITLKTLTKRTGSETSFFMWILKYPHHVLRENKMMAFAGADRLQDGMRLSFGTPIGTAARIEKLGEILIVVKVKKEHLDFAKEALKIASKKLPLRTRI 164
BLAST of FC930726 vs. ExPASy Swiss-Prot
Match: RL10_SULIK (50S ribosomal protein L10e OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpl10e PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.701e-23 Identity = 64/167 (38.32%), Postives = 93/167 (55.69%), Query Frame = 2 Query: 149 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYGVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKD-AFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV-AIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKI 643 M RP RCYR Y + + G+P PKI + G ++ + V L++ E + ALEA R K + K G + +F + + +P HVLR NKM++ AGADRLQ GMR +FG P GT AR+ +G++L+ V+ K + A+EAL+ A K P R +I Sbjct: 1 MPLRPGRCYRHFSGPAYTRKEYIPGIPQPKITKFTSGNPN---GDYDYEVRLITTEIGQIRHNALEAVRTITLKTLTKRTGSETSFFMWILKYPHHVLRENKMMAFAGADRLQDGMRLSFGTPIGTAARIEKLGEILIVVKVKKEHLDFAKEALKIASKKLPLRTRI 164
BLAST of FC930726 vs. ExPASy Swiss-Prot
Match: RL10_SULIA (50S ribosomal protein L10e OS=Sulfolobus islandicus (strain M.16.27) GN=rpl10e PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.701e-23 Identity = 64/167 (38.32%), Postives = 93/167 (55.69%), Query Frame = 2 Query: 149 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYGVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKD-AFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV-AIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKI 643 M RP RCYR Y + + G+P PKI + G ++ + V L++ E + ALEA R K + K G + +F + + +P HVLR NKM++ AGADRLQ GMR +FG P GT AR+ +G++L+ V+ K + A+EAL+ A K P R +I Sbjct: 1 MPLRPGRCYRHFSGPAYTRKEYIPGIPQPKITKFTSGNPN---GDYDYEVRLITTEIGQIRHNALEAVRTITLKTLTKRTGSETSFFMWILKYPHHVLRENKMMAFAGADRLQDGMRLSFGTPIGTAARIEKLGEILIVVKVKKEHLDFAKEALKIASKKLPLRTRI 164
BLAST of FC930726 vs. ExPASy Swiss-Prot
Match: RL10_HALSA (50S ribosomal protein L10e OS=Halobacterium salinarium GN=rpl10e PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.701e-23 Identity = 59/169 (34.91%), Postives = 92/169 (54.44%), Query Frame = 2 Query: 149 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYGVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKIIVSR 655 M +PA YR+I Y + + G+P KI + +G + D++P + LV E+ + +LEAAR++ N+++ K G+ + +++R P ++R NK + AGADR+ GMR AFG P GT AR+ G L + C+ + +EA RRA K KI V R Sbjct: 1 MSEKPASMYRKIDKPSYTRRDYVTGIPGSKIAQHKMGDLQADADDYPVQISLVPQEECQLRHGSLEAARLSANRHLIKELGEGNYKMQLRKFPHQIIRENKQATGAGADRVSDGMRQAFGVPVGTAARIQPGDQLFTAYCEVEQAAAVKEAFRRAYNKITPPCKINVER 169
BLAST of FC930726 vs. ExPASy Swiss-Prot
Match: RL10_HALS3 (50S ribosomal protein L10e OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.701e-23 Identity = 59/169 (34.91%), Postives = 92/169 (54.44%), Query Frame = 2 Query: 149 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYGVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKIIVSR 655 M +PA YR+I Y + + G+P KI + +G + D++P + LV E+ + +LEAAR++ N+++ K G+ + +++R P ++R NK + AGADR+ GMR AFG P GT AR+ G L + C+ + +EA RRA K KI V R Sbjct: 1 MSEKPASMYRKIDKPSYTRRDYVTGIPGSKIAQHKMGDLQADADDYPVQISLVPQEECQLRHGSLEAARLSANRHLIKELGEGNYKMQLRKFPHQIIRENKQATGAGADRVSDGMRQAFGVPVGTAARIQPGDQLFTAYCEVEQAAAVKEAFRRAYNKITPPCKINVER 169
BLAST of FC930726 vs. ExPASy Swiss-Prot
Match: RL10_SULSO (50S ribosomal protein L10e OS=Sulfolobus solfataricus GN=rpl10e PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.314e-22 Identity = 63/167 (37.72%), Postives = 93/167 (55.69%), Query Frame = 2 Query: 149 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYGVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKD-AFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV-AIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKI 643 M RP RCYR Y + + G+P PKI + G ++ + V L++ E + ALEA R K ++K G + +F + + +P HVLR NKM++ AGADRLQ GMR +FG P GT AR+ +G+ L+ ++ K + A+EAL+ A K P R +I Sbjct: 1 MPLRPGRCYRHFSGPAYTRKEYIPGIPQPKITKFTSGNPN---GDYDYEVRLITTEIGQIRHNALEAVRTLTLKTLSKKTGSETSFFMWILKYPHHVLRENKMMAFAGADRLQDGMRLSFGTPIGTAARIEKLGETLIVIKVKKEHLEFAKEALKIASKKLPLRTRI 164
BLAST of FC930726 vs. ExPASy Swiss-Prot
Match: RL10_METHJ (50S ribosomal protein L10e OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl10e PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.822e-22 Identity = 61/170 (35.88%), Postives = 90/170 (52.94%), Query Frame = 2 Query: 149 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYGVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKIIVSRK 658 M R+P YR + K Y + + G+P K+ + +G EFP V LV E + ALEAAR++ N+ + K G+ +HL++R +P HVLR NK + AGADR+ GMR AFGK GT AR Q + +V ++ ++ALR K P +++ K Sbjct: 1 MVRKPNSMYRNLAKKAYTRKEYMGGIPGVKVVHFDMGNL---TSEFPMEVSLVVDESCQIRHSALEAARMSINRKLNKELGRMNYHLKLRTYPHHVLRENKQATGAGADRVSQGMRLAFGKAVGTAARCQQNQKIFTVFSNPASVEKIKDALRHGGHKLPSPTHLVIEMK 167
BLAST of FC930726 vs. ExPASy Swiss-Prot
Match: RL10_METST (50S ribosomal protein L10e OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl10e PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.519e-22 Identity = 59/162 (36.42%), Postives = 91/162 (56.17%), Query Frame = 2 Query: 191 KPYPKSRFCRGVPDPKIRIYGVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKIIVSRKWGFTKF 676 +PY + + R +P KI Y +G EFP V L E ++S +LEAARIA N+Y+ + GK + L++R +P H++R N M + AGADR+Q+GMRGAFGK + A V Q +++ + + A+ AL RA K P K+++ + +F Sbjct: 3 RPYTRKDYIRKIPASKIVQYDMGNLS---GEFPLEVTLAVKEHTHLSHNSLEAARIAANRYLQRTTGKLGYRLKIRTYPHHIVRENPMATGAGADRVQSGMRGAFGKAVSSEALVRANQKIITAYVQVKDFEKAKVALNRAAMKLPVTCKLVIDKGHDLVQF 161
BLAST of FC930726 vs. ExPASy Swiss-Prot
Match: RL10_HALWD (50S ribosomal protein L10e OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl10e PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.112e-21 Identity = 59/176 (33.52%), Postives = 98/176 (55.68%), Query Frame = 2 Query: 149 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYGVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRA--KFKFPGR------QKIIVS 652 M +PA YR++ Y + + G+P KI + +G + G ++P + L E+ + +LE+AR++ N+ M K G+D + + +R P +LR NK + AGADR+ GMR AFGKP GT AR+ + + ++ C+ ++ A++ LRRA K P R QK+++S Sbjct: 1 MSDKPASMYRKLSKPSYTRRDYVTGIPGSKIAQHNMGNLQTGPQDYPVQISLRIEEECQIRHGSLESARLSANRTMLKQVGQDNYKMVLRKFPHQILRENKQATGAGADRVSDGMRQAFGKPVGTAARIQQNERVFTIYCEVDDASVAKDGLRRAYNKMSPPCRIDVEKGQKLLIS 176
BLAST of FC930726 vs. ExPASy Swiss-Prot
Match: RL10_HALLT (50S ribosomal protein L10e OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rpl10e PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.577e-20 Identity = 55/169 (32.54%), Postives = 88/169 (52.07%), Query Frame = 2 Query: 149 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYGVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKIIVSR 655 M +PA YR I Y + + G+P KI + +G D++P + L E+ + +LE++R++ N+++ K G+ + + +R P V+R NK + AGADR+ GMR AFGKP GT AR+ ++ + C + +EA RRA K +I V R Sbjct: 1 MSDKPASMYRTIDKPSYTRREYITGIPGSKIAQHNMGDLSAEPDDYPVQISLRVEEELQIRHGSLESSRLSANRHLIKELGEGNYKMTLRKFPHQVIRENKQATGAGADRVSDGMRQAFGKPVGTAARLNKDDIVFTAYCDVEQASVVKEAFRRAYNKLSPPCRITVDR 169 The following BLAST results are available for this feature:
BLAST of FC930726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930726 ID=FC930726; Name=FC930726; organism=Citrus clementina; type=EST; length=721bpback to top |