FC930734
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930734 vs. ExPASy Swiss-Prot
Match: PLET1_ARATH (AP2-like ethylene-responsive transcription factor PLT1 OS=Arabidopsis thaliana GN=PLT1 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.943e-30 Identity = 73/178 (41.01%), Postives = 103/178 (57.87%), Query Frame = 2 Query: 2 TFYRRTGRWESHIWDS----------GKQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQESLWVYIWKDSRNVV**QMSNLTKEEFVHVLRRQSAGFPRGSSKYRGVTLH-TCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLY 502 T +R TGR+E+H+WD+ G+QVYLGG+D +K+ G NF I +YE ++++ M ++T++EFV +RR+S+GF RG+S YRGVT H GRW+AR+G+ G K +YLG F TE EAA AYD AA+K G +AVTNF+ + Y Sbjct: 186 TRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEDKAARSYDLAALKYWGPSTTTNFPITNYEKEVEE------------------MKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFEINRY 345
BLAST of FC930734 vs. ExPASy Swiss-Prot
Match: AP2L1_ARATH (AP2-like ethylene-responsive transcription factor At1g16060 OS=Arabidopsis thaliana GN=At1g16060 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.943e-30 Identity = 74/178 (41.57%), Postives = 103/178 (57.87%), Query Frame = 2 Query: 2 TFYRRTGRWESHIWDS----------GKQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQESLWVYIWKDSRNVV**QMSNLTKEEFVHVLRRQSAGFPRGSSKYRGVTLHTC-GRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLY 502 T +R TGR+E+H+WD G+QVYLG +D +K+ G + +NF + +YE+D+K+ M + +KEE++ LRR+S+GF RG SKYRGV H GRWEAR+G+ G KY+YLG + T+ EAA AYD AA++ G +AVTNFD S Y Sbjct: 63 TRHRWTGRYEAHLWDKNSWNETQTKKGRQVYLGAYDEEDAAARAYDLAALKYWGRDTILNFPLCNYEEDIKE------------------MESQSKEEYIGSLRRKSSGFSRGVSKYRGVAKHHHNGRWEARIGRVFGNKYLYLGTYATQEEAAIAYDIAAIEYRGLNAVTNFDISRY 222
BLAST of FC930734 vs. ExPASy Swiss-Prot
Match: BBM_ARATH (AP2-like ethylene-responsive transcription factor BBM OS=Arabidopsis thaliana GN=BBM PE=2 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.118e-29 Identity = 72/178 (40.45%), Postives = 102/178 (57.30%), Query Frame = 2 Query: 2 TFYRRTGRWESHIWDS----------GKQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQESLWVYIWKDSRNVV**QMSNLTKEEFVHVLRRQSAGFPRGSSKYRGVTLH-TCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLY 502 T +R TGR+E+H+WD+ G+QVYLGG+D +K+ G NF + +YE ++++ M ++T++E+V LRR+S+GF RG+S YRGVT H GRW+AR+G+ G K +YLG F T+ EAA AYD AA+K G AVTNFD + Y Sbjct: 215 TRHRWTGRYEAHLWDNSCKREGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPLSEYEKEVEE------------------MKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDIAAIKFRGLSAVTNFDMNRY 374
BLAST of FC930734 vs. ExPASy Swiss-Prot
Match: BBM2_BRANA (AP2-like ethylene-responsive transcription factor BBM2 OS=Brassica napus GN=BBM2 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.460e-29 Identity = 72/178 (40.45%), Postives = 102/178 (57.30%), Query Frame = 2 Query: 2 TFYRRTGRWESHIWDS----------GKQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQESLWVYIWKDSRNVV**QMSNLTKEEFVHVLRRQSAGFPRGSSKYRGVTLH-TCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLY 502 T +R TGR+E+H+WD+ G+QVYLGG+D +K+ G NF + +YE ++++ M ++T++E+V LRR+S+GF RG+S YRGVT H GRW+AR+G+ G K +YLG F T+ EAA AYD AA+K G AVTNFD + Y Sbjct: 215 TRHRWTGRYEAHLWDNSCKREGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPMSEYEKEIEE------------------MKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDIAAIKFRGLTAVTNFDMNRY 374
BLAST of FC930734 vs. ExPASy Swiss-Prot
Match: BBM1_BRANA (AP2-like ethylene-responsive transcription factor BBM1 OS=Brassica napus GN=BBM1 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.907e-29 Identity = 72/178 (40.45%), Postives = 102/178 (57.30%), Query Frame = 2 Query: 2 TFYRRTGRWESHIWDS----------GKQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQESLWVYIWKDSRNVV**QMSNLTKEEFVHVLRRQSAGFPRGSSKYRGVTLH-TCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLY 502 T +R TGR+E+H+WD+ G+QVYLGG+D +K+ G NF + +YE ++++ M ++T++E+V LRR+S+GF RG+S YRGVT H GRW+AR+G+ G K +YLG F T+ EAA AYD AA+K G AVTNFD + Y Sbjct: 215 TRHRWTGRYEAHLWDNSCKREGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPMSEYEKEVEE------------------MKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDIAAIKFRGLTAVTNFDMNRY 374
BLAST of FC930734 vs. ExPASy Swiss-Prot
Match: SMZ_ARATH (AP2-like ethylene-responsive transcription factor SMZ OS=Arabidopsis thaliana GN=SMZ PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.367e-27 Identity = 70/154 (45.45%), Postives = 84/154 (54.55%), Query Frame = 2 Query: 2 TFYRRTGRWESHIWDSGKQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQESLWVYIWKDSRNVV**QMSNLTKEEFVHVLRRQSAGFPRGSSKYRGVTLHTCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCN 463 TFYRRTGRWESHIWD GKQVYLGGFDT IKFRG +ADINF ++DY D+ +M NL K EFV LRR+SA F RGSSKY+G+ L C ++ K + + LF R +D AA+K N Sbjct: 127 TFYRRTGRWESHIWDCGKQVYLGGFDTAYAAARAYDRAAIKFRGLDADINFVVDDYRHDID------------------KMKNLNKVEFVQTLRRESASFGRGSSKYKGLALQKCTQF---------KTHDQIHLFQN-----RGWDAAAIKYN 248
BLAST of FC930734 vs. ExPASy Swiss-Prot
Match: AIL6_ARATH (AP2-like ethylene-responsive transcription factor AIL6 OS=Arabidopsis thaliana GN=AIL6 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.511e-26 Identity = 70/178 (39.33%), Postives = 100/178 (56.18%), Query Frame = 2 Query: 2 TFYRRTGRWESHIWDSG-------KQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQESLWVYIWKDSRNVV**QMSNLTKEEFVHVLRRQSAGFPRGSSKYRGVTLH-TCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDE 511 T +R TGR+E+H+WD+ ++ GG+D +K+ A A NF I +Y ++++ M ++TK+EF+ LRR+S+GF RG+S YRGVT H GRW+AR+G+ G K +YLG F TE EAA AYD AA+K G +AVTNF+ + Y E Sbjct: 273 TRHRWTGRYEAHLWDNSCRREGQARKGRQGGYDKEDKAARAYDLAALKYWNATATTNFPITNYSKEVEE------------------MKHMTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGINAVTNFEMNRYDVE 432
BLAST of FC930734 vs. ExPASy Swiss-Prot
Match: AP2L3_ARATH (AP2-like ethylene-responsive transcription factor At1g79700 OS=Arabidopsis thaliana GN=At1g79700 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.375e-24 Identity = 68/178 (38.20%), Postives = 95/178 (53.37%), Query Frame = 2 Query: 2 TFYRRTGRWESHIWDS----------GKQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQESLWVYIWKDSRNVV**QMSNLTKEEFVHVLRRQSAGFPRGSSKYRGVTL-HTCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLY 502 T +R TGR+E+H+WD G+QVYLG +D +K+ G + +NF + Y++D+K+ M +KEE++ LRR+S+GF RG SKYRGV H GRWEAR+G+ +F T+ EAA AYD AA++ G +AVTNFD S Y Sbjct: 57 TRHRWTGRYEAHLWDKNSWNDTQTKKGRQVYLGAYDEEEAAARAYDLAALKYWGRDTLLNFPLPSYDEDVKE------------------MEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGR----------VFATQEEAAIAYDIAAIEYRGLNAVTNFDVSRY 206
BLAST of FC930734 vs. ExPASy Swiss-Prot
Match: SNZ_ARATH (AP2-like ethylene-responsive transcription factor SNZ OS=Arabidopsis thaliana GN=SNZ PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.021e-24 Identity = 56/108 (51.85%), Postives = 66/108 (61.11%), Query Frame = 2 Query: 2 TFYRRTGRWESHIWDSGKQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQESLWVYIWKDSRNVV**QMSNLTKEEFVHVLRRQSAGFPRGSSKYR 325 TFYRRTGRWESHIWD GKQVYLGGFDT I+FRG +ADINF ++DY+ D++ +M NL+KEEFV LRR SA RG SKY+ Sbjct: 113 TFYRRTGRWESHIWDCGKQVYLGGFDTAYTAARAYDRAAIRFRGLQADINFIVDDYKQDIE------------------KMKNLSKEEFVQSLRRASASLARGGSKYK 202
BLAST of FC930734 vs. ExPASy Swiss-Prot
Match: AP2L4_ARATH (AP2-like ethylene-responsive transcription factor At2g41710 OS=Arabidopsis thaliana GN=At2g41710 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.622e-12 Identity = 48/145 (33.10%), Postives = 69/145 (47.59%), Query Frame = 2 Query: 2 TFYRRTGRWESHIWDS----------GKQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQESLWVYIWKDSRNVV**QMSNLTKEEFVHVLR-----RQSAGFPRGSSKYRGVTLHTCGRWEARMGQFLGKKY 391 T +R TGR+E+H+WD GKQVYLG +D +K+ G INF + DY DL+ +M NL++EE++ LR R+S+GF RG +KYRG+ RW+A + G +Y Sbjct: 75 TRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLE------------------EMQNLSREEYLASLRRYPFGRKSSGFSRGIAKYRGLQ----SRWDASASRMPGPEY 197 The following BLAST results are available for this feature:
BLAST of FC930734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930734 ID=FC930734; Name=FC930734; organism=Citrus clementina; type=EST; length=724bpback to top |