FC930735

Overview
NameFC930735
Unique NameFC930735
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930735 vs. ExPASy Swiss-Prot
Match: DUS26_RAT (Dual specificity protein phosphatase 26 OS=Rattus norvegicus GN=Dusp26 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.857e-16
Identity = 60/160 (37.50%), Postives = 86/160 (53.75%), Query Frame = 3
Query:  102 LERITLISEAANTERPSSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDL-FKYKNFSISDNEDTNISSIFEEASDFIDH-VEQTGGRVLVHRFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRRAQPNDGFAKILLELDRKL 575
            LER+    + A       +   L++G    A +   L+ LGITH+L    +    +   +  L  +Y      D+   ++S  F+ A+DFI   + Q GG++LVH   G SRSATLVLAYLML  +FTL++A   +K  HR   PN GF + LL LDR+L
Sbjct:   48 LERLLYTGKTA-CNHADEVWPGLYLGDQDMANNRRELRRLGITHVLNASHSRWRGTPEAYEGLGIRYLGVEAHDSPAFDMSVHFQTAADFIHRALSQPGGKILVHCAVGVSRSATLVLAYLMLYHHFTLVEAIKKVKD-HRGIIPNRGFLRQLLALDRRL 205          
BLAST of FC930735 vs. ExPASy Swiss-Prot
Match: MDSP_MOUSE (Dual specificity protein phosphatase isoform MDSP OS=Mus musculus GN=Dusp13 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.343e-16
Identity = 64/155 (41.29%), Postives = 81/155 (52.26%), Query Frame = 3
Query:  132 ANTERPSSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDLFK----YKNFSISDNEDTNISSIFEEASDFIDH-VEQTGGRVLVHRFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRRAQPNDGFAKILLELDRKLHG 581
            A+  R   +  +LFIG A  A + + L  LGITH+L   A   G      PD +     Y      D  D NIS  F  A+DFI   +   G +VLVH   G SRSATLVLAYLML +  +L QA  T+ R  R   PN GF + L +LD++L G
Sbjct:   33 ASCSRVDEVWPNLFIGDAATANNRFELWKLGITHVLN--AAHGGLYCQGGPDFYGSSVCYLGIPAHDLPDFNISPYFSSAADFIHRALTVPGAKVLVHCVVGVSRSATLVLAYLMLHQQLSLQQAIITV-RERRWIFPNRGFLRQLCQLDQQLRG 184          
BLAST of FC930735 vs. ExPASy Swiss-Prot
Match: DUS1_HUMAN (Dual specificity protein phosphatase 1 OS=Homo sapiens GN=DUSP1 PE=1 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 6.343e-16
Identity = 53/143 (37.06%), Postives = 75/143 (52.45%), Query Frame = 3
Query:  147 PSSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDLFKYKNFSISDNEDTNISSIFEEASDFIDHVEQTGGRVLVHRFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRRAQPNDGFAKILLELDRKL 575
            P  I   L++G A  A     L  LGIT ++ + AN      + F   ++YK+  + DN   +ISS F EA DFID ++  GGRV VH   G SRSAT+ LAYLM      L +A+  +K+      PN  F   LL+ + ++
Sbjct:  174 PVEILPFLYLGSAYHASRKDMLDALGITALINVSAN----CPNHFEGHYQYKSIPVEDNHKADISSWFNEAIDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMGQLLQFESQV 312          
BLAST of FC930735 vs. ExPASy Swiss-Prot
Match: DUS26_BOVIN (Dual specificity protein phosphatase 26 OS=Bos taurus GN=DUSP26 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.082e-15
Identity = 60/160 (37.50%), Postives = 84/160 (52.50%), Query Frame = 3
Query:  102 LERITLISEAANTERPSSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDL-FKYKNFSISDNEDTNISSIFEEASDFIDH-VEQTGGRVLVHRFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRRAQPNDGFAKILLELDRKL 575
            LER+    + A       +   L++G    A +   L+ LGITH+L    +    +   +  L  +Y      D+   ++S  F+ A+DFI   + Q GGR+LVH   G SRSATLVLAYLML    TL++A   +K  HR   PN GF + LL LDR+L
Sbjct:   48 LERLLYTGKTA-CNHADEVWPGLYLGDQEIANNHRELRRLGITHVLNASHSRWRGTPEAYEGLGIRYLGVEAHDSPAFDMSVHFQAAADFIHRALSQPGGRILVHCAVGVSRSATLVLAYLMLYHRLTLVEAIKKVKD-HRGIIPNRGFLRQLLALDRRL 205          
BLAST of FC930735 vs. ExPASy Swiss-Prot
Match: SSH_XENLA (Protein phosphatase Slingshot homolog OS=Xenopus laevis GN=ssh PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.846e-15
Identity = 52/141 (36.88%), Postives = 73/141 (51.77%), Query Frame = 3
Query:  132 ANTERPSSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDLFKYKNFSISDNEDTNISSIFEEASDFIDHVEQTGGRVLVHRFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRRAQPNDGFAKIL 554
            A  +RPS I   L++G    A ++  L+   ++HIL    N   + D+ FP+LF Y N  + D E+TN+   ++E   FI      G RVLVH   G SRSA+ V+AY M    +TL  A   +K      QPN GF + L
Sbjct:  291 AQMDRPSEIFPYLYLGSEWNASNLEELQKNKVSHIL----NVTREIDNFFPELFMYLNIRVLDEENTNLMQYWKETHAFITTARHQGSRVLVHCKMGVSRSASTVIAYAMKEYEWTLETAIRHVKERRSIVQPNAGFMRQL 427          
BLAST of FC930735 vs. ExPASy Swiss-Prot
Match: DUS2_MOUSE (Dual specificity protein phosphatase 2 OS=Mus musculus GN=Dusp2 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.846e-15
Identity = 52/143 (36.36%), Postives = 79/143 (55.24%), Query Frame = 3
Query:  147 PSSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDLFKYKNFSISDNEDTNISSIFEEASDFIDHVEQTGGRVLVHRFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRRAQPNDGFAKILLELDRKL 575
            P  I   L++G    +  +  L+  GIT +L + A+      + F  LF YK+  + DN+   IS+ F+EA  FID V+ +GGRVLVH   G SRSAT+ LAYL+      L +A++ +K+      PN  F   LL+L+ ++
Sbjct:  177 PVEILPYLYLGSCNHSSDLQGLQACGITAVLNVSAS----CPNHFEGLFHYKSIPVEDNQMVEISAWFQEAISFIDSVKNSGGRVLVHCQAGISRSATICLAYLIQSHRVRLDEAFDFVKQRRGVISPNFSFMGQLLQLETQV 315          
BLAST of FC930735 vs. ExPASy Swiss-Prot
Match: DUS26_PONAB (Dual specificity protein phosphatase 26 OS=Pongo abelii GN=DUSP26 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.410e-15
Identity = 59/160 (36.88%), Postives = 85/160 (53.12%), Query Frame = 3
Query:  102 LERITLISEAANTERPSSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDL-FKYKNFSISDNEDTNISSIFEEASDFIDH-VEQTGGRVLVHRFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRRAQPNDGFAKILLELDRKL 575
            LER+    + A       +   L++G    A +   L+ LGITH+L    +    +   +  L  +Y      D+   ++S  F+ A+DFI   + Q GG++LVH   G SRSATLVLAYLML  + TL++A   +K  HR   PN GF + LL LDR+L
Sbjct:   48 LERLLYTGKTA-CNHADEVWPGLYLGDQDMANNRRELRRLGITHVLNASHSRWRGTPEAYEGLGIRYLGVEAHDSPAFDMSIHFQTAADFIHRALSQPGGKILVHCAVGVSRSATLVLAYLMLYHHLTLVEAIKKVKD-HRGIIPNRGFLRQLLALDRRL 205          
BLAST of FC930735 vs. ExPASy Swiss-Prot
Match: DUS26_HUMAN (Dual specificity protein phosphatase 26 OS=Homo sapiens GN=DUSP26 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.410e-15
Identity = 59/160 (36.88%), Postives = 85/160 (53.12%), Query Frame = 3
Query:  102 LERITLISEAANTERPSSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDL-FKYKNFSISDNEDTNISSIFEEASDFIDH-VEQTGGRVLVHRFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRRAQPNDGFAKILLELDRKL 575
            LER+    + A       +   L++G    A +   L+ LGITH+L    +    +   +  L  +Y      D+   ++S  F+ A+DFI   + Q GG++LVH   G SRSATLVLAYLML  + TL++A   +K  HR   PN GF + LL LDR+L
Sbjct:   48 LERLLYTGKTA-CNHADEVWPGLYLGDQDMANNRRELRRLGITHVLNASHSRWRGTPEAYEGLGIRYLGVEAHDSPAFDMSIHFQTAADFIHRALSQPGGKILVHCAVGVSRSATLVLAYLMLYHHLTLVEAIKKVKD-HRGIIPNRGFLRQLLALDRRL 205          
BLAST of FC930735 vs. ExPASy Swiss-Prot
Match: DUPD1_CHICK (Dual specificity phosphatase DUPD1 OS=Gallus gallus GN=DUPD1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.410e-15
Identity = 56/146 (38.36%), Postives = 78/146 (53.42%), Query Frame = 3
Query:  150 SSITSSLFIGGALAARSVYTLKHLGITHILCLCANE--IGQSDSQFPDL-FKYKNFSISDNEDTNISSIFEEASDFIDH-VEQTGGRVLVHRFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRRAQPNDGFAKILLELDRKL 575
            + +  +L+IG    A   Y+L+  G THIL     +  +      + D+  +Y      D     +S  F  AS+FID+ ++    +VLVH   GRSRSATLVLAYLM+ KN T++ A   + R HR   PN GF K L ELD +L
Sbjct:   48 NEVWPNLYIGDEKTALDRYSLEKAGFTHILNAAHGQRNVDTGPEYYQDMTVEYHGVEADDLPTFKLSQFFYSASEFIDNALQDERNKVLVHCAMGRSRSATLVLAYLMIYKNMTVVDAIEQVSR-HRCILPNRGFLKQLRELDIEL 192          
BLAST of FC930735 vs. ExPASy Swiss-Prot
Match: DUS13_HUMAN (Dual specificity protein phosphatase 13 OS=Homo sapiens GN=DUSP13 PE=1 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 4.111e-15
Identity = 60/165 (36.36%), Postives = 87/165 (52.73%), Query Frame = 3
Query:  102 LERITLISEAANTERPSSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIG-QSDSQFPD--LFKYKNFSISDNEDTNISSIFEEASDFIDH-VEQTGGRVLVHRFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRRAQPNDGFAKILLELDRKLHGE 584
            L+R+  + +AA       +  SLF+G A AAR    L  LGITH++   A +    + ++F      +Y      DN   ++S  F   + +I   +    GRVLVH   G SRSATLVLA+LM+ +N TL++A  T+ + HR   PN GF + L  LD +L  E
Sbjct:   31 LQRLLWVRQAATLNHIDEVWPSLFLGDAYAARDKSKLIQLGITHVVNAAAGKFQVDTGAKFYRGMSLEYYGIEADDNPFFDLSVYFLPVARYIRAALSVPQGRVLVHCAMGVSRSATLVLAFLMICENMTLVEAIQTV-QAHRNICPNSGFLRQLQVLDNRLGRE 194          
The following BLAST results are available for this feature:
BLAST of FC930735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
DUS26_RAT4.857e-1637.50Dual specificity protein phosphatase 26 OS=Rattus ... [more]
MDSP_MOUSE6.343e-1641.29Dual specificity protein phosphatase isoform MDSP ... [more]
DUS1_HUMAN6.343e-1637.06Dual specificity protein phosphatase 1 OS=Homo sap... [more]
DUS26_BOVIN1.082e-1537.50Dual specificity protein phosphatase 26 OS=Bos tau... [more]
SSH_XENLA1.846e-1536.88Protein phosphatase Slingshot homolog OS=Xenopus l... [more]
DUS2_MOUSE1.846e-1536.36Dual specificity protein phosphatase 2 OS=Mus musc... [more]
DUS26_PONAB2.410e-1536.88Dual specificity protein phosphatase 26 OS=Pongo a... [more]
DUS26_HUMAN2.410e-1536.88Dual specificity protein phosphatase 26 OS=Homo sa... [more]
DUPD1_CHICK2.410e-1538.36Dual specificity phosphatase DUPD1 OS=Gallus gallu... [more]
DUS13_HUMAN4.111e-1536.36Dual specificity protein phosphatase 13 OS=Homo sa... [more]

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Properties
Property NameValue
Genbank descriptionC34010G02EF PostHarvC1 Citrus clementina cDNA clone C34010G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930735 ID=FC930735; Name=FC930735; organism=Citrus clementina; type=EST; length=683bp
GCTGTTAACTCTGCCAGGAAAACAATTTTAATACAGGGTTCTTTGAGGGT
AGTGATGGTGTTGTTGATACTTACGAATTGAAGGTCAGACTTGAGCATAT
TCTTGAGAGGATAACATTAATTTCTGAGGCGGCAAATACAGAGAGGCCCT
CTTCAATCACAAGTAGCCTGTTCATTGGTGGTGCCCTGGCTGCAAGATCT
GTTTACACGCTTAAACATTTAGGAATTACTCATATACTGTGTTTGTGCGC
CAATGAAATCGGACAGTCAGATTCTCAGTTTCCTGATCTCTTCAAGTACA
AAAATTTTTCTATAAGTGACAATGAAGATACAAACATCAGCAGTATCTTT
GAAGAAGCTTCGGATTTTATTGATCATGTTGAACAAACGGGTGGGAGAGT
CCTAGTTCATCGCTTTGAAGGGAGAAGTAGAAGTGCCACATTAGTGCTTG
CCTACTTGATGCTCAGGAAGAACTTCACACTATTACAAGCATGGAATACC
CTAAAACGAGTTCATCGCCGAGCCCAGCCCAATGATGGGTTTGCAAAGAT
TCTTTTGGAGCTTGACAGGAAACTGCATGGTGAAGTTTCAATGGAGTGGC
AACAGCGGAAGCCAATGATGAAAGTTTGCCCAATATGCGGGAAGAATGCC
GGTCTGAGCAGCAGCTCACTTAAGCTTCATTTG
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