FC930735

Overview
NameFC930735
Unique NameFC930735
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930735 vs. ExPASy Swiss-Prot
Match: DUS6_MOUSE (Dual specificity protein phosphatase 6 OS=Mus musculus GN=Dusp6 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.026e-13
Identity = 51/149 (34.23%), Postives = 72/149 (48.32%), Query Frame = 3
Query:  147 PSSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDLF------KYKNFSISDNEDTNISSIFEEASDFIDHVEQTGGRVLVHRFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRRAQPNDGFAKILLELDRKL 575
            P  I   L++G A  + ++  L+  GI +IL +  N         P+LF      KYK   ISD+   N+S  F EA  FID        VLVH   G SRS T+ +AYLM + N ++  A++ +K       PN  F   LL+ +R L
Sbjct:  207 PVEILPFLYLGCAKDSTNLDVLEEFGIKYILNVTPN--------LPNLFENAGEFKYKQIPISDHWSQNLSQFFPEAISFIDEARGKNCGVLVHCLAGISRSVTVTVAYLMQKLNLSMNDAYDIVKMKKSNISPNFNFMGQLLDFERTL 347          
BLAST of FC930735 vs. ExPASy Swiss-Prot
Match: DUS6_HUMAN (Dual specificity protein phosphatase 6 OS=Homo sapiens GN=DUSP6 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.026e-13
Identity = 51/149 (34.23%), Postives = 72/149 (48.32%), Query Frame = 3
Query:  147 PSSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDLF------KYKNFSISDNEDTNISSIFEEASDFIDHVEQTGGRVLVHRFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRRAQPNDGFAKILLELDRKL 575
            P  I   L++G A  + ++  L+  GI +IL +  N         P+LF      KYK   ISD+   N+S  F EA  FID        VLVH   G SRS T+ +AYLM + N ++  A++ +K       PN  F   LL+ +R L
Sbjct:  207 PVEILPFLYLGCAKDSTNLDVLEEFGIKYILNVTPN--------LPNLFENAGEFKYKQIPISDHWSQNLSQFFPEAISFIDEARGKNCGVLVHCLAGISRSVTVTVAYLMQKLNLSMNDAYDIVKMKKSNISPNFNFMGQLLDFERTL 347          
BLAST of FC930735 vs. ExPASy Swiss-Prot
Match: DUS6_BOVIN (Dual specificity protein phosphatase 6 OS=Bos taurus GN=DUSP6 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.026e-13
Identity = 51/149 (34.23%), Postives = 72/149 (48.32%), Query Frame = 3
Query:  147 PSSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDLF------KYKNFSISDNEDTNISSIFEEASDFIDHVEQTGGRVLVHRFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRRAQPNDGFAKILLELDRKL 575
            P  I   L++G A  + ++  L+  GI +IL +  N         P+LF      KYK   ISD+   N+S  F EA  FID        VLVH   G SRS T+ +AYLM + N ++  A++ +K       PN  F   LL+ +R L
Sbjct:  207 PVEILPFLYLGCAKDSTNLDVLEEFGIKYILNVTPN--------LPNLFENAGEFKYKQIPISDHWSQNLSQFFPEAISFIDEARGKNCGVLVHCLAGISRSVTVTVAYLMQKLNLSMNDAYDIVKMKKSNISPNFNFMGQLLDFERTL 347          
BLAST of FC930735 vs. ExPASy Swiss-Prot
Match: DUS27_MOUSE (Inactive dual specificity phosphatase 27 OS=Mus musculus GN=Dusp27 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.026e-13
Identity = 57/161 (35.40%), Postives = 82/161 (50.93%), Query Frame = 3
Query:  111 ITLISEAANTERPSSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPD--LFKYKNFSISDNEDTNISSIFEEASDFIDHVEQT-GGRVLVHRFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRRAQPNDGFAKILLELDRKLHGE 584
            +T   + A       +  ++FI     A +   LK LGITHIL         + S+F      +Y    + D  + +IS  F +A++F+D    T  G+VLV    G SRSA LV+AYLM+  +  +L+A  T++R  R   PNDGF K L EL+ KL  E
Sbjct:  122 LTQDRQEAPRNEVDEVWPNVFIAEKSVAVNKGRLKRLGITHILNAAHGTGVYTGSEFYTGLEIQYLGVEVDDFPEVDISQHFRKAAEFLDEALLTYRGKVLVSSEMGISRSAVLVVAYLMIFHSMAILEALMTVRR-KRAIYPNDGFLKQLRELNEKLMEE 281          
BLAST of FC930735 vs. ExPASy Swiss-Prot
Match: DUPD1_BOVIN (Dual specificity phosphatase DUPD1 OS=Bos taurus GN=DUPD1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.026e-13
Identity = 52/146 (35.62%), Postives = 74/146 (50.68%), Query Frame = 3
Query:  150 SSITSSLFIGGALAARSVYTLKHLGITHILCLCANE--IGQSDSQFPDL-FKYKNFSISDNEDTNISSIFEEASDFIDH-VEQTGGRVLVHRFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRRAQPNDGFAKILLELDRKL 575
            + +   L+IG    A   Y L+  G TH+L        +      + D+  +Y      D    ++S  F  A+ FID  +     ++LVH   GRSRSATLVLAYLM+ +N TL+ A   + + +R   PN GF K L ELDR+L
Sbjct:   55 NEVWPKLYIGDETTALDRYGLQKAGFTHVLNAAHGRWNVDTGPDYYRDMAIEYHGVEADDLPSFDLSVFFYPAAAFIDAALRYDHNKILVHCVMGRSRSATLVLAYLMIHRNMTLVDAIQQVAK-NRCVLPNRGFLKQLRELDRQL 199          
BLAST of FC930735 vs. ExPASy Swiss-Prot
Match: PTP3_CHLMO (Dual specificity protein phosphatase OS=Chlamydomonas moewusii GN=VH-PTP13 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.573e-13
Identity = 56/192 (29.17%), Postives = 85/192 (44.27%), Query Frame = 3
Query:   45 EGSDGVVDTYELKVRLEHILERITLISEAANTERPSSITSSLFIGGALAARSVYT------LKHLGITHILCLCANEIGQS-DSQFPDLFKYKNFSISDNEDTNISSIFEEASDFIDHVEQTGGRVLVHRFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRRAQPNDGFAKILLELDRKLHGEVSMEW 599
            + SD  +  YE K R+            AA   +     +S+ + G L   S         L  LG+THIL     ++G+      P  F Y +  I D E  +I ++      F+   + +GG  LVH   G SRSA++V+AYLM  +     +A   ++R   +  PN GF   L ELDR L    +++W
Sbjct:   48 DSSDEHLSFYEAKARIVRAFAASRAPQPAAPAAKALEGDASVIVPGKLILSSCEVEESSELLTKLGVTHIL-----QVGEELKPSHPGRFTYLSLPILDMEGQDIVALLPSCFQFLQQAQASGGVCLVHCLAGISRSASVVIAYLMWTQGMPYTEARAMVRRARSKVYPNTGFTLQLQELDR-LRESGAIQW 233          
BLAST of FC930735 vs. ExPASy Swiss-Prot
Match: DUPD1_PANTR (Dual specificity phosphatase DUPD1 OS=Pan troglodytes GN=DUPD1 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.573e-13
Identity = 51/146 (34.93%), Postives = 74/146 (50.68%), Query Frame = 3
Query:  150 SSITSSLFIGGALAARSVYTLKHLGITHILCLCANE--IGQSDSQFPDL-FKYKNFSISDNEDTNISSIFEEASDFIDH-VEQTGGRVLVHRFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRRAQPNDGFAKILLELDRKL 575
            + +   L+IG    A   Y L+  G TH+L        +      + D+  +Y      D    ++S  F  A+ FID  +     ++LVH   GRSRSATLVLAYLM+ K+ TL+ A   + + +R   PN GF K L ELD++L
Sbjct:   56 NEVWPKLYIGDEATALDRYRLQKAGFTHVLNAAHGRWNVDTGPDYYRDMDIQYHGVEADDLPTFDLSVFFYPAAAFIDRALRDDHSKILVHCVMGRSRSATLVLAYLMIHKDMTLVDAIQQVAK-NRCVLPNRGFLKQLRELDKQL 200          
BLAST of FC930735 vs. ExPASy Swiss-Prot
Match: DUPD1_HUMAN (Dual specificity phosphatase DUPD1 OS=Homo sapiens GN=DUPD1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.573e-13
Identity = 51/146 (34.93%), Postives = 74/146 (50.68%), Query Frame = 3
Query:  150 SSITSSLFIGGALAARSVYTLKHLGITHILCLCANE--IGQSDSQFPDL-FKYKNFSISDNEDTNISSIFEEASDFIDH-VEQTGGRVLVHRFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRRAQPNDGFAKILLELDRKL 575
            + +   L+IG    A   Y L+  G TH+L        +      + D+  +Y      D    ++S  F  A+ FID  +     ++LVH   GRSRSATLVLAYLM+ K+ TL+ A   + + +R   PN GF K L ELD++L
Sbjct:   56 NEVWPKLYIGDEATALDRYRLQKAGFTHVLNAAHGRWNVDTGPDYYRDMDIQYHGVEADDLPTFDLSVFFYPAAAFIDRALSDDHSKILVHCVMGRSRSATLVLAYLMIHKDMTLVDAIQQVAK-NRCVLPNRGFLKQLRELDKQL 200          
BLAST of FC930735 vs. ExPASy Swiss-Prot
Match: DUPD1_RAT (Dual specificity phosphatase DUPD1 OS=Rattus norvegicus GN=Dupd1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.120e-12
Identity = 52/140 (37.14%), Postives = 71/140 (50.71%), Query Frame = 3
Query:  168 LFIGGALAARSVYTLKHLGITHILCLCANE--IGQSDSQFPDL-FKYKNFSISDNEDTNISSIFEEASDFIDHVEQTG-GRVLVHRFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRRAQPNDGFAKILLELDRKL 575
            L +G    A   Y L+  G TH+L        +      + D+  +Y      D    ++S  F  A+ FID   Q    ++LVH   GRSRSATLVLAYLM+ KN TL+ A   + + +R   PN GF K L ELD++L
Sbjct:   61 LHVGDEATALDRYGLQKAGFTHVLNAAHGRWNVDTGPDYYRDMAIEYHGVEADDVPTFDLSIFFYSAAAFIDSALQDDHSKILVHCAMGRSRSATLVLAYLMIHKNMTLVDAIQQVAK-NRCVLPNRGFLKQLRELDKQL 199          
BLAST of FC930735 vs. ExPASy Swiss-Prot
Match: MPL2_DICDI (MAP kinase phosphatase with leucine-rich repeats protein 2 OS=Dictyostelium discoideum GN=mpl2 PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.462e-12
Identity = 46/143 (32.17%), Postives = 73/143 (51.05%), Query Frame = 3
Query:  147 PSSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDLFKYKNFSISDNEDTNISSIFEEASDFIDHVEQTGGRVLVHRFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRRAQPNDGFAKILLELDRKL 575
            P  I   L++G    A +   LK   +THIL      +      +PDLFKY   +I D ++ NI   F+E + FID   + GG VL+H   G SRSA+  +A++M++ +    +A++   +   R  PN GF   L + ++ L
Sbjct:  557 PDLIIDKLYLGCRECAMNKSWLKDNNVTHILT-----VANFKPLYPDLFKYLIINIEDVDEANIYQHFKEMNAFIDEGREKGG-VLIHCRAGVSRSASATMAFIMMKNSLKFQEAFDITIKGRPRIYPNIGFINQLKKFEKDL 693          
The following BLAST results are available for this feature:
BLAST of FC930735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
DUS6_MOUSE5.026e-1334.23Dual specificity protein phosphatase 6 OS=Mus musc... [more]
DUS6_HUMAN5.026e-1334.23Dual specificity protein phosphatase 6 OS=Homo sap... [more]
DUS6_BOVIN5.026e-1334.23Dual specificity protein phosphatase 6 OS=Bos taur... [more]
DUS27_MOUSE5.026e-1335.40Inactive dual specificity phosphatase 27 OS=Mus mu... [more]
DUPD1_BOVIN5.026e-1335.62Dual specificity phosphatase DUPD1 OS=Bos taurus G... [more]
PTP3_CHLMO8.573e-1329.17Dual specificity protein phosphatase OS=Chlamydomo... [more]
DUPD1_PANTR8.573e-1334.93Dual specificity phosphatase DUPD1 OS=Pan troglody... [more]
DUPD1_HUMAN8.573e-1334.93Dual specificity phosphatase DUPD1 OS=Homo sapiens... [more]
DUPD1_RAT1.120e-1237.14Dual specificity phosphatase DUPD1 OS=Rattus norve... [more]
MPL2_DICDI1.462e-1232.17MAP kinase phosphatase with leucine-rich repeats p... [more]

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Properties
Property NameValue
Genbank descriptionC34010G02EF PostHarvC1 Citrus clementina cDNA clone C34010G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930735 ID=FC930735; Name=FC930735; organism=Citrus clementina; type=EST; length=683bp
GCTGTTAACTCTGCCAGGAAAACAATTTTAATACAGGGTTCTTTGAGGGT
AGTGATGGTGTTGTTGATACTTACGAATTGAAGGTCAGACTTGAGCATAT
TCTTGAGAGGATAACATTAATTTCTGAGGCGGCAAATACAGAGAGGCCCT
CTTCAATCACAAGTAGCCTGTTCATTGGTGGTGCCCTGGCTGCAAGATCT
GTTTACACGCTTAAACATTTAGGAATTACTCATATACTGTGTTTGTGCGC
CAATGAAATCGGACAGTCAGATTCTCAGTTTCCTGATCTCTTCAAGTACA
AAAATTTTTCTATAAGTGACAATGAAGATACAAACATCAGCAGTATCTTT
GAAGAAGCTTCGGATTTTATTGATCATGTTGAACAAACGGGTGGGAGAGT
CCTAGTTCATCGCTTTGAAGGGAGAAGTAGAAGTGCCACATTAGTGCTTG
CCTACTTGATGCTCAGGAAGAACTTCACACTATTACAAGCATGGAATACC
CTAAAACGAGTTCATCGCCGAGCCCAGCCCAATGATGGGTTTGCAAAGAT
TCTTTTGGAGCTTGACAGGAAACTGCATGGTGAAGTTTCAATGGAGTGGC
AACAGCGGAAGCCAATGATGAAAGTTTGCCCAATATGCGGGAAGAATGCC
GGTCTGAGCAGCAGCTCACTTAAGCTTCATTTG
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