FC930735

Overview
NameFC930735
Unique NameFC930735
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930735 vs. ExPASy Swiss-Prot
Match: DUS10_MOUSE (Dual specificity protein phosphatase 10 OS=Mus musculus GN=Dusp10 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.257e-12
Identity = 45/141 (31.91%), Postives = 71/141 (50.35%), Query Frame = 3
Query:  168 LFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDLFKYKNFSISDNEDTNISSIFEEASDFIDHVEQTGGRVLVHRFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRRAQPNDGFAKILLELDRKLHGEVS 590
            LF+G    A+ + T++ L I +++ +  +       +   LF YK    +D+   N+   FEEA +FI+   Q G  +L+H   G SRSAT+V+AYLM     T+  A+  +K       PN  F   LLE +  L+  V+
Sbjct:  330 LFLGNEQDAQDLDTMQRLNIGYVINVTTHLPLYHYEK--GLFNYKRLPATDSNKQNLRRYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFEEDLNNGVT 468          
BLAST of FC930735 vs. ExPASy Swiss-Prot
Match: STYX_PONAB (Serine/threonine/tyrosine-interacting protein OS=Pongo abelii GN=STYX PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12
Identity = 51/141 (36.17%), Postives = 67/141 (47.52%), Query Frame = 3
Query:  156 ITSSLFIG---GALAARSVYTLKHLGITHILCLCAN-EIGQSDSQFPDLFKYKNFSISDNEDTNISSIFEEASDFIDHVEQTGGRVLVHRFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRRAQPNDGFAKILLELD 566
            I   LF+G    A+ ++     KH GITHI+C+  N E       F  LF+Y    I+DN   NI   F    +FID   Q GG+VLVH   G SRSA  V+AY+M         A+  ++       PN GF   L E +
Sbjct:   32 ILPGLFLGPYSSAMKSKLPILQKH-GITHIICIRQNIEANFIKPNFQQLFRYLVLDIADNPVENIIRFFPMTKEFIDGSLQMGGKVLVHGNAGISRSAAFVIAYIMETFGMKYRDAFAYVQERRFCINPNAGFVHQLQEYE 171          
BLAST of FC930735 vs. ExPASy Swiss-Prot
Match: STYX_MOUSE (Serine/threonine/tyrosine-interacting protein OS=Mus musculus GN=Styx PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12
Identity = 50/141 (35.46%), Postives = 67/141 (47.52%), Query Frame = 3
Query:  156 ITSSLFIG---GALAARSVYTLKHLGITHILCLCAN-EIGQSDSQFPDLFKYKNFSISDNEDTNISSIFEEASDFIDHVEQTGGRVLVHRFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRRAQPNDGFAKILLELD 566
            +   LF+G    A+ ++     KH GITHI+C+  N E       F  LF+Y    I+DN   NI   F    +FID   Q GG+VLVH   G SRSA  V+AY+M         A+  ++       PN GF   L E +
Sbjct:   32 VLPGLFLGPYSSAMKSKLPILQKH-GITHIICIRQNIEANFIKPNFQQLFRYLVLDIADNPVENIIRFFPMTKEFIDGSLQNGGKVLVHGNAGISRSAAFVIAYIMETFGMKYRDAFAYVQERRFCINPNAGFVHQLQEYE 171          
BLAST of FC930735 vs. ExPASy Swiss-Prot
Match: STYX_HUMAN (Serine/threonine/tyrosine-interacting protein OS=Homo sapiens GN=STYX PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12
Identity = 51/141 (36.17%), Postives = 67/141 (47.52%), Query Frame = 3
Query:  156 ITSSLFIG---GALAARSVYTLKHLGITHILCLCAN-EIGQSDSQFPDLFKYKNFSISDNEDTNISSIFEEASDFIDHVEQTGGRVLVHRFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRRAQPNDGFAKILLELD 566
            I   LF+G    A+ ++     KH GITHI+C+  N E       F  LF+Y    I+DN   NI   F    +FID   Q GG+VLVH   G SRSA  V+AY+M         A+  ++       PN GF   L E +
Sbjct:   32 ILPGLFLGPYSSAMKSKLPVLQKH-GITHIICIRQNIEANFIKPNFQQLFRYLVLDIADNPVENIIRFFPMTKEFIDGSLQMGGKVLVHGNAGISRSAAFVIAYIMETFGMKYRDAFAYVQERRFCINPNAGFVHQLQEYE 171          
BLAST of FC930735 vs. ExPASy Swiss-Prot
Match: SSH2_MOUSE (Protein phosphatase Slingshot homolog 2 OS=Mus musculus GN=Ssh2 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12
Identity = 42/140 (30.00%), Postives = 74/140 (52.86%), Query Frame = 3
Query:  141 ERPSSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDLFKYKNFSISDNEDTNISSIFEEASDFIDHVEQTGGRVLVHRFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRRAQPNDGFAKILLE 560
            + P+ I   +F+G    A ++  L++ G+ +IL    N   + D+ FP +F+Y N  + D E T++ + + +   FI   ++ G + LVH   G SRSA+ V+AY M    + L +A++ +K      +PN  F + L E
Sbjct:  306 DSPTQIFEHVFLGSEWNASNLEDLQNRGVRYIL----NVTREIDNFFPGVFEYHNIRVYDEEATDLLAYWNDTYKFISKAKKHGSKCLVHCKMGVSRSASTVIAYAMKEYGWNLDRAYDYVKERRTVTKPNPSFMRQLEE 441          
BLAST of FC930735 vs. ExPASy Swiss-Prot
Match: SSH2_HUMAN (Protein phosphatase Slingshot homolog 2 OS=Homo sapiens GN=SSH2 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12
Identity = 42/140 (30.00%), Postives = 74/140 (52.86%), Query Frame = 3
Query:  141 ERPSSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDLFKYKNFSISDNEDTNISSIFEEASDFIDHVEQTGGRVLVHRFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRRAQPNDGFAKILLE 560
            + P+ I   +F+G    A ++  L++ G+ +IL    N   + D+ FP +F+Y N  + D E T++ + + +   FI   ++ G + LVH   G SRSA+ V+AY M    + L +A++ +K      +PN  F + L E
Sbjct:  306 DSPTQIFEHVFLGSEWNASNLEDLQNRGVRYIL----NVTREIDNFFPGVFEYHNIRVYDEEATDLLAYWNDTYKFISKAKKHGSKCLVHCKMGVSRSASTVIAYAMKEYGWNLDRAYDYVKERRTVTKPNPSFMRQLEE 441          
BLAST of FC930735 vs. ExPASy Swiss-Prot
Match: DUS19_HUMAN (Dual specificity protein phosphatase 19 OS=Homo sapiens GN=DUSP19 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12
Identity = 46/129 (35.66%), Postives = 67/129 (51.94%), Query Frame = 3
Query:  168 LFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDLFKYKNFSISDNEDTNISSIFEEASDFIDHVEQTGGRVLVHRFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRRAQPNDGFAKIL 554
            L +G   AA  + TLK   +THIL    N     ++ F   F YK+ SI D  +TNI S F E  +FI+  ++  G VLVH   G SR+A +V+ +LM  +  +   A++ +K       PN GF + L
Sbjct:   73 LLLGSQDAAHDLDTLKKNKVTHIL----NVAYGVENAFLSDFTYKSISILDLPETNILSYFPECFEFIEEAKRKDGVVLVHCNAGVSRAAAIVIGFLMNSEQTSFTSAFSLVKNARPSICPNSGFMEQL 197          
BLAST of FC930735 vs. ExPASy Swiss-Prot
Match: DUPD1_ORYLA (Dual specificity phosphatase DUPD1 OS=Oryzias latipes GN=dupd1 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12
Identity = 56/165 (33.94%), Postives = 78/165 (47.27%), Query Frame = 3
Query:  102 LERITLISEAANTERPSSITSSLFIGGALAARSVYTLKHLGITHILCLCA----NEIGQSDSQFPDLFKYKNFSISDNEDTNISSIFEEASDFIDHVEQTGGRVLVHRFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRRAQPNDGFAKILLELDRKLHGE 584
            LE++      A     + +   +++G    A     LK LGITH+L        N +  +D       +Y      D    NIS  F +A++FI   E     VLVH   GRSRSATLVLAYLM++++ +++ A   + R  R   PN GF K L  LD  L  E
Sbjct:   33 LEQLFWSGPTAQYAHVNQVWPRIYLGDEKTALERPALKDLGITHVLNAAVGKWNNVLTGADYYTGMNIRYLGVEADDKPTFNISQYFSQAAEFIH--EALIHPVLVHCVMGRSRSATLVLAYLMIKEHLSVVDAVEHV-RQRRCILPNHGFLKQLRALDIALQEE 194          
BLAST of FC930735 vs. ExPASy Swiss-Prot
Match: SSH3_HUMAN (Protein phosphatase Slingshot homolog 3 OS=Homo sapiens GN=SSH3 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.238e-11
Identity = 49/141 (34.75%), Postives = 72/141 (51.06%), Query Frame = 3
Query:  132 ANTERPSSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDLFKYKNFSISDNEDTNISSIFEEASDFIDHVEQTGGRVLVHRFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRRAQPNDGFAKIL 554
            A  +R S I   L++G    A ++  L+   +THIL + A EI   D+ +P+ F Y N  + D E   +   ++E   FI+     G  VLVH   G SRSA  VLAY M +   +L QA   ++ +   A+PN GF + L
Sbjct:  324 AQRDRASRIFPHLYLGSEWNAANLEELQRNRVTHILNM-AREI---DNFYPERFTYHNVRLWDEESAQLLPHWKETHRFIEAARAQGTHVLVHCKMGVSRSAATVLAYAMKQYECSLEQALRHVQELRPIARPNPGFLRQL 460          
BLAST of FC930735 vs. ExPASy Swiss-Prot
Match: DUPD1_HORSE (Dual specificity phosphatase DUPD1 OS=Equus caballus GN=DUPD1 PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.238e-11
Identity = 50/146 (34.25%), Postives = 73/146 (50.00%), Query Frame = 3
Query:  150 SSITSSLFIGGALAARSVYTLKHLGITHILCLCANE--IGQSDSQFPDL-FKYKNFSISDNEDTNISSIFEEASDFIDH-VEQTGGRVLVHRFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRRAQPNDGFAKILLELDRKL 575
            + +   L+IG    A   Y L+  G TH+L        +      + D+  +Y      D    ++S  F  A+ FI   +     ++LVH   GRSRSATLVLAYLM+ +N TL+ A   + + +R   PN GF K L ELD++L
Sbjct:   55 NEVWPKLYIGDEATALDRYGLQKAGFTHVLNAAHGRWNVDTGPEYYRDMAIEYHGVEADDLPTFDLSVFFYPAAAFIHAALGSDHNKILVHCVMGRSRSATLVLAYLMIHRNMTLVDAIQQVAK-NRCVLPNRGFLKQLRELDKQL 199          
The following BLAST results are available for this feature:
BLAST of FC930735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
DUS10_MOUSE7.257e-1231.91Dual specificity protein phosphatase 10 OS=Mus mus... [more]
STYX_PONAB9.479e-1236.17Serine/threonine/tyrosine-interacting protein OS=P... [more]
STYX_MOUSE9.479e-1235.46Serine/threonine/tyrosine-interacting protein OS=M... [more]
STYX_HUMAN9.479e-1236.17Serine/threonine/tyrosine-interacting protein OS=H... [more]
SSH2_MOUSE9.479e-1230.00Protein phosphatase Slingshot homolog 2 OS=Mus mus... [more]
SSH2_HUMAN9.479e-1230.00Protein phosphatase Slingshot homolog 2 OS=Homo sa... [more]
DUS19_HUMAN9.479e-1235.66Dual specificity protein phosphatase 19 OS=Homo sa... [more]
DUPD1_ORYLA9.479e-1233.94Dual specificity phosphatase DUPD1 OS=Oryzias lati... [more]
SSH3_HUMAN1.238e-1134.75Protein phosphatase Slingshot homolog 3 OS=Homo sa... [more]
DUPD1_HORSE1.238e-1134.25Dual specificity phosphatase DUPD1 OS=Equus caball... [more]

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Properties
Property NameValue
Genbank descriptionC34010G02EF PostHarvC1 Citrus clementina cDNA clone C34010G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930735 ID=FC930735; Name=FC930735; organism=Citrus clementina; type=EST; length=683bp
GCTGTTAACTCTGCCAGGAAAACAATTTTAATACAGGGTTCTTTGAGGGT
AGTGATGGTGTTGTTGATACTTACGAATTGAAGGTCAGACTTGAGCATAT
TCTTGAGAGGATAACATTAATTTCTGAGGCGGCAAATACAGAGAGGCCCT
CTTCAATCACAAGTAGCCTGTTCATTGGTGGTGCCCTGGCTGCAAGATCT
GTTTACACGCTTAAACATTTAGGAATTACTCATATACTGTGTTTGTGCGC
CAATGAAATCGGACAGTCAGATTCTCAGTTTCCTGATCTCTTCAAGTACA
AAAATTTTTCTATAAGTGACAATGAAGATACAAACATCAGCAGTATCTTT
GAAGAAGCTTCGGATTTTATTGATCATGTTGAACAAACGGGTGGGAGAGT
CCTAGTTCATCGCTTTGAAGGGAGAAGTAGAAGTGCCACATTAGTGCTTG
CCTACTTGATGCTCAGGAAGAACTTCACACTATTACAAGCATGGAATACC
CTAAAACGAGTTCATCGCCGAGCCCAGCCCAATGATGGGTTTGCAAAGAT
TCTTTTGGAGCTTGACAGGAAACTGCATGGTGAAGTTTCAATGGAGTGGC
AACAGCGGAAGCCAATGATGAAAGTTTGCCCAATATGCGGGAAGAATGCC
GGTCTGAGCAGCAGCTCACTTAAGCTTCATTTG
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