FC930740

Overview
NameFC930740
Unique NameFC930740
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.708e-52
Identity = 102/216 (47.22%), Postives = 146/216 (67.59%), Query Frame = 1
Query:   67 MGLFRSPTMAMFL-LFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFII 711
            MG  +S  + + + + + + ++A+DMS+VSYD  +   S     D E   +FE+W+VKHGK Y ++ EKE+R  IF++NLRFI+  N+EN +Y++GL  FADL+  EY+ +  GA     R  +    S+RY     + LP SVDWR +GAV EVKDQG C SCWAFST+ AVEG+NKIVTG L++LSEQ+L++C+   N GC GG ++ A+EFI+
Sbjct:    1 MGSAKSAMLILLVAMVIASCATAIDMSVVSYDDNNRLHSVF---DAEASLIFESWMVKHGKVYGSVAEKERRLTIFEDNLRFINNRNAENLSYRLGLTGFADLSLHEYKEVCHGADPRPPRNHVFMTSSDRYKTSADDVLPKSVDWRNEGAVTEVKDQGHCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE-NNGCGGGKLETAYEFIM 212          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 1.231e-49
Identity = 105/212 (49.53%), Postives = 145/212 (68.40%), Query Frame = 1
Query:   97 MFLLFLFTVSSALDMSIVSYDKTHESKS-SSWRTDDEVMAMFEAWLVKHGKAY-NALG-EKEKRFEIFKENLRFIDEHNS---ENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTS-YNEGCNGGLMDYAFEFII 711
            + LL +   ++A DMSI+SY+  H ++      T+ E  A ++ WL ++G    NALG E E+RF +F +NL+F+D HN+   E   +++G+NRFADLTNEE+R+  LGA+   +  +       RY     E LP+SVDWR+KGAVA VK+QG CGSCWAFS ++ VE IN++VTG +I+LSEQELV+C T+  N GCNGGLMD AF+FII
Sbjct:   11 LLLLIVGAATAAPDMSIISYNAEHGARGLEEGPTEAEARAAYDLWLAENGGGSPNALGGEHERRFLVFWDNLKFVDAHNARADERGGFRLGMNRFADLTNEEFRATFLGAKVAERSRAA----GERYRHDGVEELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQELVECSTNGQNSGCNGGLMDDAFDFII 218          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.607e-49
Identity = 101/195 (51.79%), Postives = 138/195 (70.77%), Query Frame = 1
Query:  133 LDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVA-EVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDT-SYNEGCNGGLMDYAFEFI 708
            L + ++S      + + S R + EV+ M+E WLV++GK YN LGEKE+RF+IFK+NL+ I+EHNS+ NR+Y+ GLN+F+DLT +E+++ +LG +   K  S     + RY  + G+ LPD VDWR++GAV   VK QG CGSCWAF+   AVEGIN+I TG L+SLSEQEL+DCD  + N GC GG   +AFEFI
Sbjct:   13 LSVLLISISLGVVTATESQRNEGEVLTMYEQWLVENGKNYNGLGEKERRFKIFKDNLKRIEEHNSDPNRSYERGLNKFSDLTADEFQASYLGGKMEKKSLS---DVAERYQYKEGDVLPDEVDWRERGAVVPRVKRQGECGSCWAFAATGAVEGINQITTGELVSLSEQELIDCDRGNDNFGCAGGGAVWAFEFI 204          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.741e-49
Identity = 99/201 (49.25%), Postives = 133/201 (66.17%), Query Frame = 1
Query:  115 FTVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTS--LKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFI 708
            F   + + +S +S  ++         ++D +  ++E W   H  A + L EK +RF +FKEN++FI E N + +  YK+ LN+F D+TN+E+RS + G++    R+   ++    +     VG     S+DWR KGAV  VKDQG CGSCWAFSTIA+VEGIN+I TG L+SLSEQELVDCDTSYNEGCNGGLMDYAFEFI
Sbjct:    6 FIALALVALSFLSIAQSIPFTEKDLASEDSLWNLYEKWRTHHTVARD-LDEKNRRFNVFKENVKFIHEFNQKKDAPYKLALNKFGDMTNQEFRSKYAGSKIQHHRSQRGIQKNTGSFMYENVGSLPAASIDWRAKGAVTGVKDQGQCGSCWAFSTIASVEGINQIKTGELVSLSEQELVDCDTSYNEGCNGGLMDYAFEFI 205          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 8.819e-48
Identity = 98/200 (49.00%), Postives = 128/200 (64.00%), Query Frame = 1
Query:  112 LFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSN-RYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFI 708
            L  +S AL ++I      HE +  S   ++ +  ++E W   H     +L EK+KRF +FK N   +   N  ++ YK+ LN+FAD+TN E+R+ + G++    R      R N  ++    + +P SVDWRKKGAV  VKDQG CGSCWAFSTI AVEGIN+I T  L+SLSEQELVDCDT  N+GCNGGLMDYAFEFI
Sbjct:    6 LLALSLALVLAITESFDFHEKELES---EESLWGLYERWR-SHHTVSRSLHEKQKRFNVFKHNAMHVHNANKMDKPYKLKLNKFADMTNHEFRNTYSGSKVKHHRMFRGGPRGNGTFMYEKVDTVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEFI 201          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 2.837e-46
Identity = 109/223 (48.88%), Postives = 138/223 (61.88%), Query Frame = 1
Query:   91 MAMFLLFL--FTVSSALD----MSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKH------GKAYNALGEKEKRFEIFKENLRFIDEHNS---ENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAV-AEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDC-DTSYNEGCNGGLMDYAFEFI 708
            MA FLL L  F   +A      MSI+ Y+  H  +    RT+ E  A ++ WL +H      G     +GE E+RF +F +NL+F+D HN+   E   +++G+NRFADLTN E+R+ +LG     +   +       Y     EALPDSVDWR KGAV A VK+QG CGSCWAFS +AAVEGINKIVTG L+SLSEQELV+C     N GCNGG+MD AF FI
Sbjct:   15 MACFLLILAAFAPPAAAAPPDIMSIIRYNAEHGVRGLE-RTEAEARAAYDLWLARHRRGGGGGSRNGFIGEHERRFRVFWDNLKFVDAHNARADERGGFRLGMNRFADLTNGEFRATYLGTTPAGRGRRV----GEAYRHDGVEALPDSVDWRDKGAVVAPVKNQGQCGSCWAFSAVAAVEGINKIVTGELVSLSEQELVECARNGQNSGCNGGIMDDAFAFI 232          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.705e-46
Identity = 97/207 (46.86%), Postives = 131/207 (63.29%), Query Frame = 1
Query:   91 MAMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKR-SNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFI 708
            MAM  L    +S +L + + +    HE    S   ++ +  ++E W   H     +LGEK KRF +FK N+  +   N  ++ YK+ LN+FAD+TN E+RS + G++    +    S+  S  ++     ++P SVDWRKKGAV +VKDQG CGSCWAFSTI AVEGIN+I T  L+SLSEQELVDCD   N+GCNGGLM+ AFEFI
Sbjct:    1 MAMKKLLWVVLSLSLVLGVANSFDFHEKDLES---EESLWDLYERWR-SHHTVSRSLGEKHKRFNVFKANVMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHHKMFRGSQHGSGTFMYEKVGSVPASVDWRKKGAVTDVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDKEENQGCNGGLMESAFEFI 203          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 1.839e-45
Identity = 94/205 (45.85%), Postives = 129/205 (62.93%), Query Frame = 1
Query:   97 MFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSN-RYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFI 708
            ++++  F++   +  S   +DK   S+ S W        ++E W   H     +LGEK KRF +FK NL  +   N  ++ YK+ LN+FAD+TN E+RS + G++    R    +   N  ++     ++P SVDWRKKGAV +VKDQG CGSCWAFST+ AVEGIN+I T  L++LSEQELVDCD   N+GCNGGLM+ AFEFI
Sbjct:    7 LWVVLSFSLVLGVANSFDFHDKDLASEESLWD-------LYERWR-SHHTVSRSLGEKHKRFNVFKANLMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHPRMFRGTPHENGAFMYEKVVSVPPSVDWRKKGAVTDVKDQGQCGSCWAFSTVVAVEGINQIKTNKLVALSEQELVDCDKEENQGCNGGLMESAFEFI 203          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 3.468e-44
Identity = 90/201 (44.78%), Postives = 127/201 (63.18%), Query Frame = 1
Query:  106 LFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFI 708
            LF+    S  D SIV Y +   + +      + ++ +F +W++ H K Y  + EK  RFEIFK+NL +IDE N +N +Y +GLN FADL+N+E+   ++G+   A   +++      ++      LP++VDWRKKGAV  V+ QGSCGSCWAFS +A VEGINKI TG L+ LSEQELVDC+   + GC GG   YA E++
Sbjct:   17 LFVHMSVSFGDFSIVGYSQDDLTST------ERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSNDEFNEKYVGSLIDA---TIEQSYDEEFINEDTVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERR-SHGCKGGYPPYALEYV 207          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: PAPA2_CARPA (Chymopapain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 8.542e-43
Identity = 84/171 (49.12%), Postives = 122/171 (71.35%), Query Frame = 1
Query:  199 DEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKR-TSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFI 708
            + ++ +F++W++KH K Y ++ EK  RFEIF++NL +IDE N +N +Y +GLN FADL+N+E++  ++G  F A+  T L+   +  +  +     P S+DWR KGAV  VK+QG+CGSCWAFSTIA VEGINKIVTG+L+ LSEQELVDCD  ++ GC GG    + +++
Sbjct:   42 ERLIQLFDSWMLKHNKIYESIDEKIYRFEIFRDNLMYIDETNKKNNSYWLGLNGFADLSNDEFKKKYVG--FVAEDFTGLEHFDNEDFTYKHVTNYPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCD-KHSYGCKGGYQTTSLQYV 209          
The following BLAST results are available for this feature:
BLAST of FC930740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CPR3_ARATH7.708e-5247.22Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
ORYB_ORYSJ1.231e-4949.53Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
CPR2_ARATH1.607e-4951.79Probable cysteine proteinase At3g43960 OS=Arabidop... [more]
CYSP_HEMSP2.741e-4949.25Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]
CYSEP_RICCO8.819e-4849.00Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]
CYSP1_ORYSJ2.837e-4648.88Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
CYSEP_VIGMU3.705e-4646.86Vignain OS=Vigna mungo PE=1 SV=1[more]
CYSEP_PHAVU1.839e-4545.85Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
PAPA3_CARPA3.468e-4444.78Caricain OS=Carica papaya PE=1 SV=2[more]
PAPA2_CARPA8.542e-4349.12Chymopapain OS=Carica papaya PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC34010G07EF PostHarvC1 Citrus clementina cDNA clone C34010G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930740 ID=FC930740; Name=FC930740; organism=Citrus clementina; type=EST; length=711bp
GACTCTGCCTCATCAATCCATCTTCTTCTCCCAAAAAGAAAAAAAAAAAA
GTTCTTTTCTCAAAAGATGGGTTTGTTTAGATCACCAACCATGGCCATGT
TTTTACTTTTTCTCTTCACTGTTTCATCTGCCTTGGACATGTCGATTGTA
TCTTATGATAAAACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGA
TGAGGTTATGGCTATGTTCGAGGCCTGGCTCGTGAAGCATGGCAAGGCTT
ATAACGCTTTGGGTGAAAAAGAGAAGAGGTTTGAGATCTTTAAGGAAAAT
CTTAGGTTTATTGATGAACATAACTCAGAGAACCGGACCTACAAGGTTGG
GTTGAACCGGTTTGCTGATTTGACCAACGAGGAGTACCGGTCCATGCATC
TGGGTGCACGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGC
AACCGTTATCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTG
GAGGAAGAAAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGA
GTTGCTGGGCATTTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATT
GTTACAGGTAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGA
TACATCATATAATGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCG
AGTTCATTATT
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