FC930740

Overview
NameFC930740
Unique NameFC930740
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: CATS_HUMAN (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3)

HSP 1 Score: 139.043 bits (349), Expect = 2.332e-32
Identity = 74/168 (44.05%), Postives = 101/168 (60.12%), Query Frame = 1
Query:  226 WLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY--NEGCNGGLMDYAFEFII 711
            W   +GK Y    E+  R  I+++NL+F+  HN E+     +Y +G+N   D+T+EE  S+       + R   + +R+  Y       LPDSVDWR+KG V EVK QGSCG+CWAFS + A+E   K+ TG L+SLS Q LVDC T    N+GCNGG M  AF++II
Sbjct:   31 WKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSL-----MSSLRVPSQWQRNITYKSNPNRILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYII 193          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: ALEU_ARATH (Thiol protease aleurain OS=Arabidopsis thaliana GN=ALEU PE=1 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 2.332e-32
Identity = 77/165 (46.67%), Postives = 102/165 (61.82%), Query Frame = 1
Query:  217 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFI 708
            F  +  ++GK Y  + E + RF IFKENL  I   N +  +YK+G+N+FADLT +E++   LGA   A+  S   K S++       ALP++ DWR+ G V+ VKDQG CGSCW FST  A+E       G  ISLSEQ+LVDC  ++N  GCNGGL   AFE+I
Sbjct:   59 FARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQRTKLGA---AQNCSATLKGSHKVTEA---ALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFNNYGCNGGLPSQAFEYI 217          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.977e-32
Identity = 74/168 (44.05%), Postives = 101/168 (60.12%), Query Frame = 1
Query:  226 WLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY--NEGCNGGLMDYAFEFII 711
            W   + K Y    E+  R  I+++NL+F+  HN E+     +Y +G+N   D+T EE  S+      G+ R   + +R+  Y     + LPDSVDWR+KG V EVK QGSCG+CWAFS + A+E   K+ TG L+SLS Q LVDC T    N+GCNGG M  AF++II
Sbjct:   31 WKKTYSKQYKEENEEVARRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTGEEVISL-----MGSLRVPSQWQRNVTYRSNSNQKLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYII 193          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: CATL_DROME (Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 3.977e-32
Identity = 77/178 (43.26%), Postives = 105/178 (58.99%), Query Frame = 1
Query:  199 DEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMHLGARFGAK---RTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFI 708
            D VM  +  + ++H K Y    E+  R +IF EN   I +HN        ++K+ +N++ADL + E+R +  G  +      R + +S +   ++      LP SVDWR KGAV  VKDQG CGSCWAFS+  A+EG +   +G L+SLSEQ LVDC T Y N GCNGGLMD AF +I
Sbjct:   53 DVVMEEWHTFKLEHRKNYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQLMNGFNYTLHKQLRAADESFKGVTFISPAHVTLPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYI 230          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.194e-32
Identity = 79/195 (40.51%), Postives = 114/195 (58.46%), Query Frame = 1
Query:  130 ALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGA-VAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFI 708
            A ++++ S++K H                F++W+V+H K Y+ L E   R ++F  N R I+ HN+ N T+K+GLN+F+D++ +E R  +L +          S     YL   G   P S+DWRKKG  V+ VK+QGSCGSCW FST  A+E    I TG ++SL+EQ+LVDC  ++ N GC GGL   AFE+I
Sbjct:   22 ASNLAVSSFEKLH----------------FKSWMVQHQKKYS-LEEYHHRLQVFVSNWRKINAHNAGNHTFKLGLNQFSDMSFDEIRHKYLWSE-----PQNCSATKGNYLRGTGP-YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYI 193          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.194e-32
Identity = 71/165 (43.03%), Postives = 100/165 (60.61%), Query Frame = 1
Query:  217 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFI 708
            F  + V++GK+Y +  E  +RF IF E+L  +   N +   Y++G+NRF+D++ EE+++  LGA      T      +  +L R   ALP++ DWR+ G V+ VK+Q  CGSCW FST  A+E      TG  ISLSEQ+LVDC   +N  GCNGGL   AFE+I
Sbjct:   61 FARFAVRYGKSYESAAEVRRRFRIFSESLEEVRSTNRKGLPYRLGINRFSDMSWEEFQATRLGAAQTCSATL-----AGNHLMRDAAALPETKDWREDGIVSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDCAGGFNNFGCNGGLPSQAFEYI 220          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.157e-31
Identity = 79/185 (42.70%), Postives = 111/185 (60.00%), Query Frame = 1
Query:  160 KTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNS-ENRTYKVGLNRFADLTNEEYRSMH-LGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFI 708
            KTH+  S  +   D+V  +F  + V+ G+ Y +  E++ R  IF++NL+ I+E N+ E  + K G+  FAD+T+ EY+    L  R  AK T      S   +P     LP   DWR+K AV +VK+QGSCGSCWAFS    +EG+  + TG L   SEQEL+DCDT+ +  CNGGLMD A++ I
Sbjct:  292 KTHKKHSHRF---DKVDHLFYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKERTGLWQRDEAKATG----GSAAVVPAYHGELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCDTT-DSACNGGLMDNAYKAI 468          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: LMCPB_LEIME (Cysteine proteinase B OS=Leishmania mexicana GN=LMCPB PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.511e-31
Identity = 73/170 (42.94%), Postives = 108/170 (63.53%), Query Frame = 1
Query:  211 AMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHL-GARF--GAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFII 711
            A+FE +   +G+AY  L E+++R   F+ NL  + EH + N   + G+ +F DL+  E+ + +L GA +   AKR + +  R  R       A+PD+VDWR+KGAV  VKDQG+CGSCWAFS +  +EG   +    L+SLSEQ+LV CD   N+GC+GGLM  AF++++
Sbjct:   36 ALFEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAARYLNGAAYFAAAKRHAAQHYRKAR---ADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCD-DMNDGCDGGLMLQAFDWLL 201          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: CYSP2_LEIPI (Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS2 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.511e-31
Identity = 73/170 (42.94%), Postives = 108/170 (63.53%), Query Frame = 1
Query:  211 AMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHL-GARF--GAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFII 711
            A+FE +   +G+AY  L E+++R   F+ NL  + EH + N   + G+ +F DL+  E+ + +L GA +   AKR + +  R  R       A+PD+VDWR+KGAV  VKDQG+CGSCWAFS +  +EG   +    L+SLSEQ+LV CD   N+GC+GGLM  AF++++
Sbjct:   36 ALFEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAARYLNGAAYFAAAKRHAAQHYRKAR---ADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCD-DMNDGCDGGLMLQAFDWLL 201          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.974e-31
Identity = 72/171 (42.11%), Postives = 104/171 (60.82%), Query Frame = 1
Query:  217 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY--NEGCNGGLMDYAFEFII 711
            ++ W   +GK Y    E+  R  I+++NL+ +  HN E+     +Y++G+N   D+T+EE  S+       + R   +  R+  Y     + LPDS+DWR+KG V EVK QG+CGSCWAFS + A+E   K+ TG L+SLS Q LVDC T+   N+GCNGG M  AF++II
Sbjct:   28 WDLWKKTYGKQYKEKNEEVARRLIWEKNLKTVTLHNLEHSMGMHSYELGMNHLGDMTSEEVISL-----MSSLRVPSQWPRNVTYKSDPNQKLPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTAKYGNKGCNGGFMTEAFQYII 193          
The following BLAST results are available for this feature:
BLAST of FC930740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CATS_HUMAN2.332e-3244.05Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3[more]
ALEU_ARATH2.332e-3246.67Thiol protease aleurain OS=Arabidopsis thaliana GN... [more]
CATS_CANFA3.977e-3244.05Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]
CATL_DROME3.977e-3243.26Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1... [more]
CATH_PIG5.194e-3240.51Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]
ALEU_HORVU5.194e-3243.03Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CPR1_DROME1.157e-3142.70Putative cysteine proteinase CG12163 OS=Drosophila... [more]
LMCPB_LEIME1.511e-3142.94Cysteine proteinase B OS=Leishmania mexicana GN=LM... [more]
CYSP2_LEIPI1.511e-3142.94Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS... [more]
CATS_BOVIN1.974e-3142.11Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC34010G07EF PostHarvC1 Citrus clementina cDNA clone C34010G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930740 ID=FC930740; Name=FC930740; organism=Citrus clementina; type=EST; length=711bp
GACTCTGCCTCATCAATCCATCTTCTTCTCCCAAAAAGAAAAAAAAAAAA
GTTCTTTTCTCAAAAGATGGGTTTGTTTAGATCACCAACCATGGCCATGT
TTTTACTTTTTCTCTTCACTGTTTCATCTGCCTTGGACATGTCGATTGTA
TCTTATGATAAAACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGA
TGAGGTTATGGCTATGTTCGAGGCCTGGCTCGTGAAGCATGGCAAGGCTT
ATAACGCTTTGGGTGAAAAAGAGAAGAGGTTTGAGATCTTTAAGGAAAAT
CTTAGGTTTATTGATGAACATAACTCAGAGAACCGGACCTACAAGGTTGG
GTTGAACCGGTTTGCTGATTTGACCAACGAGGAGTACCGGTCCATGCATC
TGGGTGCACGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGC
AACCGTTATCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTG
GAGGAAGAAAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGA
GTTGCTGGGCATTTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATT
GTTACAGGTAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGA
TACATCATATAATGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCG
AGTTCATTATT
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