FC930740

Overview
NameFC930740
Unique NameFC930740
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.578e-31
Identity = 77/177 (43.50%), Postives = 109/177 (61.58%), Query Frame = 1
Query:  193 TDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFI 708
            +D E+ A F+     H + Y +L E++ RF IF++ LR I EHN +      TY + +N+F+D+T+EE+R M +  +  A R +L+          VG A P+S+DWR KG V  V++QG CGSCWA ST AA+E  + I +GS + LS Q+LVDC TSY N GCNGG     FE++
Sbjct:   18 SDQELWADFKK---THARTYKSLREEKLRFNIFQDTLRQIAEHNVKYENGESTYYLAINKFSDITDEEFRDMLM--KNEASRPNLEGLEVADLT--VGAA-PESIDWRSKGVVLPVRNQGECGSCWALSTAAAIESQSAIKSGSKVPLSPQQLVDCSTSYGNHGCNGGFAVNGFEYV 186          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: CYSP4_DICDI (Cysteine proteinase 4 OS=Dictyostelium discoideum GN=cprD PE=2 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 3.367e-31
Identity = 77/201 (38.31%), Postives = 112/201 (55.72%), Query Frame = 1
Query:  121 VSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGS---LISLSEQELVDCDTSY-NEGCNGGLMDYAFEFII 711
            V S L + +VSY    +  S       +    F  W+  H + Y++  E   R++IFK N+ ++ + NS+     +GLN FAD+TN+EYR+ +LG  F         +       ++      +VDWR +GAV  +K+QG CG CW+FST  + EG + I +G+   L+SLSEQ L+DC  SY N GC GGLM  AFE+II
Sbjct:    3 VLSFLCLLLVSYASAKQQFSEL-----QYRNAFTNWMQAHQRTYSS-EEFNARYQIFKSNMDYVHQWNSKGGETVLGLNVFADITNQEYRTTYLGTPFDGSALIGTEEE------KIFSTPAPTVDWRAQGAVTPIKNQGQCGGCWSFSTTGSTEGAHFIASGTKKDLVSLSEQNLIDCSKSYGNNGCEGGLMTLAFEYII 191          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.367e-31
Identity = 75/172 (43.60%), Postives = 100/172 (58.14%), Query Frame = 1
Query:  217 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDS--VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFII 711
            +E +  K GK Y    E+  R  +F + L+FI EHN        TY + +N F+DLT+EE  +   G          + +     LP+     P +  VDWR KGAV  VKDQG CGSCWAFS +AA+EG + + TG L+SLSEQ LVDC +SY N+GCNGG    A+++II
Sbjct:   20 WENFKTKFGKKYANSEEESHRMSVFMDKLKFIQEHNERYDKGEVTYWLKINNFSDLTHEEVLATKTGMT--------RRRHPLSVLPKSAPTTPMAADVDWRNKGAVTPVKDQGQCGSCWAFSAVAALEGAHFLKTGDLVSLSEQNLVDCSSSYGNQGCNGGWPYQAYQYII 183          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: CATL1_MOUSE (Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 3.367e-31
Identity = 75/176 (42.61%), Postives = 101/176 (57.39%), Query Frame = 1
Query:  196 DDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFI 708
            D    A +  W   H + Y    E+E R  I+++N+R I  HN E       + + +N F D+TNEE+R +  G R        K K+   +   +   +P SVDWR+KG V  VK+QG CGSCWAFS    +EG   + TG LISLSEQ LVDC  +  N+GCNGGLMD+AF++I
Sbjct:   22 DQTFSAEWHQWKSTHRRLYGT-NEEEWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQVVNGYRHQ------KHKKGRLFQEPLMLKIPKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYI 190          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.743e-31
Identity = 81/217 (37.33%), Postives = 122/217 (56.22%), Query Frame = 1
Query:   91 MAMFLLFLFTVSSALDMSIVSYDKTHES----KSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRT---YKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEAL---PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFII 711
            M   +L LF   S L +S  S   TH S      + + T  +V ++F+ W  +HG+ Y+   E+ KR EIFK N  +I + N+  ++   +++GLN+FAD+T +E+   +L A    K  S + K +N+ + +   +    P S DWRKKG + +VK QG CG  WAFS   A+E  + I TG L+SLSEQELVDC    +EG   G    +FE+++
Sbjct:    1 MGFLVLLLF---SLLGLSSSSSISTHRSILDLDLTKFTTQKQVSSLFQLWKSEHGRVYHNHEEEAKRLEIFKNNSNYIRDMNANRKSPHSHRLGLNKFADITPQEFSKKYLQA---PKDVSQQIKMANKKMKKEQYSCDHPPASWDWRKKGVITQVKYQGGCGRGWAFSATGAIEAAHAIATGDLVSLSEQELVDC-VEESEGSYNGWQYQSFEWVL 210          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.743e-31
Identity = 77/180 (42.78%), Postives = 103/180 (57.22%), Query Frame = 1
Query:  199 DEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNS----ENRTYKVGLNRFADLTNEEYRSM-----HLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFI 708
            D +   +  + ++H K Y    E+  R +IF EN   I +HN        +YK+GLN++AD+ + E++       H   +   +RT L       Y+P     +P SVDWR+ GAV  VKDQG CGSCWAFS+  A+EG +    G L+SLSEQ LVDC T Y N GCNGGLMD AF +I
Sbjct:   22 DLIKEEWHTYKLQHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKYADMLHHEFKETMNGYNHTLRQLMRERTGLVGAT---YIPPAHVTVPKSVDWREHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYI 198          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 5.743e-31
Identity = 75/176 (42.61%), Postives = 100/176 (56.82%), Query Frame = 1
Query:  196 DDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVG----LNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFI 708
            D    A +  W   H + Y    E+E R  ++++N+R I  HN E    K G    +N F D+TNEE+R +  G R        K K+   +   +   +P +VDWR+KG V  VK+QG CGSCWAFS    +EG   + TG LISLSEQ LVDC     N+GCNGGLMD+AF++I
Sbjct:   22 DQTFNAQWHQWKSTHRRLYGT-NEEEWRRAVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVNGYRHQ------KHKKGRLFQEPLMLQIPKTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYI 190          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.743e-31
Identity = 75/166 (45.18%), Postives = 106/166 (63.86%), Query Frame = 1
Query:  217 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGA-VAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFI 708
            F++W+V+H K Y++  E   R + F  NLR I+ HN+ N T+K+GLN+F+D++ +E +  +L +    +  +  + +SN YL   G   P S+DWRKKG  V  VK+QGSCGSCW FST  A+E    I TG L  L+EQ+LVDC  ++ N GC GGL   AFE+I
Sbjct:   35 FQSWMVQHQKKYSS-EEYYHRLQAFASNLREINAHNARNHTFKMGLNQFSDMSFDELKRKYLWS----EPQNCSATKSN-YLRGTGP-YPPSMDWRKKGNFVTPVKNQGSCGSCWTFSTTGALESAVAIATGKLPFLAEQQLVDCAQNFNNHGCQGGLPSQAFEYI 193          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.743e-31
Identity = 75/166 (45.18%), Postives = 104/166 (62.65%), Query Frame = 1
Query:  217 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEA-LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFI 708
            F  +  ++GK Y ++ E + RF +FKENL  I   N +  +YK+ LN+FADLT +E++   LGA   A+  S   K S++    + EA +PD+ DWR+ G V+ VK+QG CGSCW FST  A+E       G  ISLSEQ+LVDC  ++N  GC+GGL   AFE+I
Sbjct:   59 FSRFTHRYGKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQRYKLGA---AQNCSATLKGSHK----ITEATVPDTKDWREDGIVSPVKEQGHCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGTFNNFGCHGGLPSQAFEYI 217          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.796e-31
Identity = 74/182 (40.66%), Postives = 107/182 (58.79%), Query Frame = 1
Query:  178 SSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFI 708
            S++ + D  + A +  W   H + Y  + E+E R  ++++N + ID HN E       +++ +N F D+TNEE+R +  G +      + K K+   +   +   +P SVDW KKG V  VK+QG CGSCWAFS   A+EG     TG L+SLSEQ LVDC  +  N+GCNGGLMD AF++I
Sbjct:   16 SAAPKLDPNLDAHWHQWKATHRRLYG-MNEEEWRRAVWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFRQVMNGFQ------NQKHKKGKLFHEPLLVDVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYI 190          
The following BLAST results are available for this feature:
BLAST of FC930740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CATLL_PHACE2.578e-3143.50Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
CYSP4_DICDI3.367e-3138.31Cysteine proteinase 4 OS=Dictyostelium discoideum ... [more]
CRUST_PANBO3.367e-3143.60Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CATL1_MOUSE3.367e-3142.61Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2[more]
P34_SOYBN5.743e-3137.33P34 probable thiol protease OS=Glycine max PE=1 SV... [more]
CATL_SARPE5.743e-3142.78Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
CATL1_RAT5.743e-3142.61Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]
CATH_BOVIN5.743e-3145.18Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]
ALEUL_ARATH5.743e-3145.18Thiol protease aleurain-like OS=Arabidopsis thalia... [more]
CATL2_BOVIN9.796e-3140.66Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC34010G07EF PostHarvC1 Citrus clementina cDNA clone C34010G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930740 ID=FC930740; Name=FC930740; organism=Citrus clementina; type=EST; length=711bp
GACTCTGCCTCATCAATCCATCTTCTTCTCCCAAAAAGAAAAAAAAAAAA
GTTCTTTTCTCAAAAGATGGGTTTGTTTAGATCACCAACCATGGCCATGT
TTTTACTTTTTCTCTTCACTGTTTCATCTGCCTTGGACATGTCGATTGTA
TCTTATGATAAAACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGA
TGAGGTTATGGCTATGTTCGAGGCCTGGCTCGTGAAGCATGGCAAGGCTT
ATAACGCTTTGGGTGAAAAAGAGAAGAGGTTTGAGATCTTTAAGGAAAAT
CTTAGGTTTATTGATGAACATAACTCAGAGAACCGGACCTACAAGGTTGG
GTTGAACCGGTTTGCTGATTTGACCAACGAGGAGTACCGGTCCATGCATC
TGGGTGCACGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGC
AACCGTTATCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTG
GAGGAAGAAAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGA
GTTGCTGGGCATTTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATT
GTTACAGGTAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGA
TACATCATATAATGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCG
AGTTCATTATT
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