FC930740

Overview
NameFC930740
Unique NameFC930740
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: CATL6_HUMAN (Putative cathepsin L-like protein 6 OS=Homo sapiens GN=CTSLL6 PE=5 SV=3)

HSP 1 Score: 119.398 bits (298), Expect = 1.912e-26
Identity = 61/138 (44.20%), Postives = 84/138 (60.87%), Query Frame = 1
Query:  310 IDEHNSE----NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFI 708
            I++HN E      ++ + +N F D+TNEE+R +  G ++       K ++  ++  R+   +P SVDWR+KG +  VKDQG CGSCWAFS   A+EG     TG LISL+EQ LVDC     NEGCNGG MD  F ++
Sbjct:    2 IEQHNQEYSQGKHSFTMAMNAFGDMTNEEFRQVMNGFQYQ------KHRKGKQFQERLLPEIPTSVDWREKGYMTPVKDQGQCGSCWAFSATGALEGQMFWKTGKLISLNEQNLVDCSGPQGNEGCNGGFMDNPFRYV 133          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.261e-26
Identity = 64/163 (39.26%), Postives = 95/163 (58.28%), Query Frame = 1
Query:  235 KHGKAYNALGEKEKRFEIFKENLRFIDEHNSENR----TYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFI 708
            ++G+ Y    E+  R  +F++N + I++ N +      T+KV +N+F D+TNEE+ ++  G + G++      +    +    G    D VDWR K  V  VKDQ  CGSCWAFS   A+EG + +    L+SLSEQ+LVDC T Y N+GC GG M  AF++I
Sbjct:   26 QYGRKYGDAKEELYRQRVFQQNEQLIEDFNKKFENGEVTFKVAMNQFGDMTNEEFNAVMKGYKKGSR-----GEPKAVFTAEAGPMAAD-VDWRTKALVTPVKDQEQCGSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCSTDYGNDGCGGGWMTSAFDYI 182          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: CATL2_PARTE (Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT00022898001 PE=3 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 5.562e-26
Identity = 66/170 (38.82%), Postives = 97/170 (57.06%), Query Frame = 1
Query:  214 MFEAWLVKHGKAYNALGEKEKRFEIFKENLRFID--EHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDW--RKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFI 708
            ++  W +K+ + Y +  ++  RF++F +NL +I   + ++E+ TY + LN+FAD++ +E+ S +L  R   K   L +  +N             VDW   KK     VK+QGSCGSCWAFS + A+E    I       LSEQ+LVDC   Y NEGCNGG MD AFE++
Sbjct:   25 LYANWKMKYNRRYTSQRDEMYRFKVFSDNLNYIRAFQDSTESATYTLELNQFADMSQQEFASTYLSLRV-PKTAKLNASNANFQYKGA------EVDWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNKKYELSEQDLVDCSGPYDNEGCNGGWMDSAFEYV 187          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.488e-26
Identity = 64/170 (37.65%), Postives = 96/170 (56.47%), Query Frame = 1
Query:  217 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYL--------PRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFE 702
            FE +++ + K Y     K  RF+IFK+NL  I+E N  N +    +N+F+DL+  E  + + G    +K+ S   + ++ +         P V + LP + DWR    +  VKDQG+CGSCWA + +  +E +  I    LI+LSEQ+L+DCD S N  C+GGLM  AFE
Sbjct:   32 FETFIINYNKQYPDTKTKNYRFKIFKQNLEDINEKNKLNDSAIYNINKFSDLSKNELLTKYTGLT--SKKPSNMVRSTSNFCNVIHLDAPPDVHDELPQNFDWRVNNKMTSVKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCD-SANMACDGGLMHTAFE 198          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: CPGP1_ZINOF (Zingipain-1 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.761e-25
Identity = 55/79 (69.62%), Postives = 63/79 (79.75%), Query Frame = 1
Query:  475 EALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFII 711
            + LPDS+DWR+KGAV  VK+QG CGSCWAF  IAAVEGIN+IVTG LISLSEQ+LVDC T  N GC GG    AF++II
Sbjct:    1 DVLPDSIDWREKGAVVPVKNQGGCGSCWAFDAIAAVEGINQIVTGDLISLSEQQLVDCSTR-NHGCEGGWPYRAFQYII 78          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: CATV_NPVST (Viral cathepsin OS=Spodoptera litura multicapsid nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.605e-25
Identity = 68/210 (32.38%), Postives = 112/210 (53.33%), Query Frame = 1
Query:   97 MFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGA---RFGAKRTSLKSKRSNRYLPRVGEAL--PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFII 711
            M+L++ +T+ +    SI +    ++  S+S          +E ++ +H K Y    +++  F  FK NL  ++  N+ +     G+N+F+D+    + + H G       +  ++    R   Y+   G +   P+S DWRK   V +VK+QG CGSCWAF+ I  +E    I+  SLI LSEQ+L+DCD   ++GC+GGLM  AF+ II
Sbjct:    1 MYLIYYYTIIAVATASIANEKIFYDIDSAS--------VYYENFIKQHNKEYTTPDQRDAAFVNFKRNLADMNAMNNVSNQAVYGINKFSDIDKITFVNEHAGLVSNLINSTDSNFDPYRLCEYVTVAGPSARTPESFDWRKLNKVTKVKEQGVCGSCWAFAAIGNIESQYAIMHDSLIDLSEQQLLDCD-RVDQGCDGGLMHLAFQEII 201          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: CATJ_RAT (Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 3.605e-25
Identity = 67/177 (37.85%), Postives = 98/177 (55.37%), Query Frame = 1
Query:  196 DDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVG----LNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFII 711
            D  + A ++ W  K+ K+Y+ + E+ KR  +++ENL+ I  HN EN   K G    +N FAD T EE+R         A  T+  +++      +V   LP+  DWRK+G V  V++QG CGSCWAF+ + A+EG     TG+L  LS Q L+DC  S  N GC  G    AF +++
Sbjct:   22 DPNLDAEWQDWKTKYAKSYSPVEEELKR-AVWEENLKMIQLHNKENGLGKNGFTMEMNAFADTTGEEFRKSLSDILIPAAVTNPSAQK------QVSIGLPNFKDWRKEGYVTPVRNQGKCGSCWAFAAVGAIEGQMFSKTGNLTPLSVQNLLDCSKSEGNNGCRWGTAHQAFNYVL 191          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 6.150e-25
Identity = 73/184 (39.67%), Postives = 101/184 (54.89%), Query Frame = 1
Query:  202 EVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHN----SENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLP-RVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD---------TSYNEGCNGGLMDYAFEFII 711
            E  + F  +  K  K Y+   E  +RFEIFK NL  I+E N    +     K G+N+FADL+++E+++ +L  +       L       YL      ++P + DWR +GAV  VK+QG CGSCW+FST   VEG + I    L+SLSEQ LVDCD          + +EGCNGGL   A+ +II
Sbjct:   24 EEQSQFLEFQDKFNKKYSH-EEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPVAD---YLDDEFINSIPTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNAYNYII 203          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.049e-24
Identity = 75/174 (43.10%), Postives = 99/174 (56.90%), Query Frame = 1
Query:  199 DEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKV-GLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNR--YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFII 711
            DE    F+   +K+ K Y+   E E RF IFK N+     +    R   + G+  ++DLT +E+   HL A +      + S RSN    L +    +P + DWR+KGAV EVK+QG CGSCWAFST   VE      TG L+SLSEQ+LVDCD   ++GCNGGL   A+E II
Sbjct:   17 DEKYVQFK---LKYRKQYHET-EDEIRFNIFKSNILKAQLYQVFVRGSAIYGVTPYSDLTTDEFARTHLTASW-----VVPSSRSNTPTSLGKEVNNIPKNFDWREKGAVTEVKNQGMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCD-GLDDGCNGGLPSNAYESII 180          
BLAST of FC930740 vs. ExPASy Swiss-Prot
Match: ERVC_TABDI (Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.789e-24
Identity = 52/77 (67.53%), Postives = 63/77 (81.82%), Query Frame = 1
Query:  481 LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFII 711
            LP+ +DWRKKGAV  VK+QGSCGSCWAFST++ VE IN+I TG+LISLSEQELVDCD   N GC GG   +A+++II
Sbjct:    1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDKK-NHGCLGGAFVFAYQYII 76          
The following BLAST results are available for this feature:
BLAST of FC930740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CATL6_HUMAN1.912e-2644.20Putative cathepsin L-like protein 6 OS=Homo sapien... [more]
CYSP3_HOMAM3.261e-2639.26Digestive cysteine proteinase 3 OS=Homarus america... [more]
CATL2_PARTE5.562e-2638.82Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT0... [more]
CATV_NPVAH9.488e-2637.65Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]
CPGP1_ZINOF2.761e-2569.62Zingipain-1 OS=Zingiber officinale PE=1 SV=1[more]
CATV_NPVST3.605e-2532.38Viral cathepsin OS=Spodoptera litura multicapsid n... [more]
CATJ_RAT3.605e-2537.85Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2[more]
CYSP1_DICDI6.150e-2539.67Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
CATL_SCHMA1.049e-2443.10Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]
ERVC_TABDI1.789e-2467.53Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionC34010G07EF PostHarvC1 Citrus clementina cDNA clone C34010G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930740 ID=FC930740; Name=FC930740; organism=Citrus clementina; type=EST; length=711bp
GACTCTGCCTCATCAATCCATCTTCTTCTCCCAAAAAGAAAAAAAAAAAA
GTTCTTTTCTCAAAAGATGGGTTTGTTTAGATCACCAACCATGGCCATGT
TTTTACTTTTTCTCTTCACTGTTTCATCTGCCTTGGACATGTCGATTGTA
TCTTATGATAAAACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGA
TGAGGTTATGGCTATGTTCGAGGCCTGGCTCGTGAAGCATGGCAAGGCTT
ATAACGCTTTGGGTGAAAAAGAGAAGAGGTTTGAGATCTTTAAGGAAAAT
CTTAGGTTTATTGATGAACATAACTCAGAGAACCGGACCTACAAGGTTGG
GTTGAACCGGTTTGCTGATTTGACCAACGAGGAGTACCGGTCCATGCATC
TGGGTGCACGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGC
AACCGTTATCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTG
GAGGAAGAAAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGA
GTTGCTGGGCATTTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATT
GTTACAGGTAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGA
TACATCATATAATGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCG
AGTTCATTATT
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