FC930749

Overview
NameFC930749
Unique NameFC930749
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_EHRCJ (Chaperone protein dnaK OS=Ehrlichia canis (strain Jake) GN=dnaK PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.331e-39
Identity = 93/227 (40.97%), Postives = 140/227 (61.67%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRD--GLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+AW++     +SP++I AF+L KM+   E +L     KAVI+VPA FN+AQR+A K AG IAGLD+  ++ +P AAALAYGL+K D   + AVY   GGTF+ SILEI++GV +VKA       GG DFD  ++ +L  +F +    D  +  + +QR   A+E+AK+ LS+  + ++ L  + +     S   K L + +TR++FE+LV +LI+ T   C+   K
Sbjct:   93 GDAWIKVLGKEYSPSQIGAFVLEKMKETAERHLGHKVEKAVITVPAYFNDAQRQATKDAGKIAGLDVIRIINEPTAAALAYGLNKSDKQKVIAVYDLGGGTFDVSILEIADGVFEVKATNGDTMLGGEDFDHAIMDYLMDDFKKTTGIDLHNDAMAVQRIKEASEKAKIELSNRMETDINLPFISS----DSTGPKHLSLKLTRAKFENLVDDLIQRTIEPCKKALK 315          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_SHEAM (Chaperone protein dnaK OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=dnaK PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.575e-39
Identity = 96/222 (43.24%), Postives = 134/222 (60.36%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKR--DGLFAVYSF-GGTFEFSILEISNG----VIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEET 647
            G+AWVE+     +P ++ A +L KM+   E +L E  T+AVI+VPA FN+AQR+A K AG IAGLD++ ++ +P AAALAYG+DK+  D + AVY   GGTF+ SI+EI N       +V A       GG DFD  L+ +L  EF +    D  + PL +QR   AAE+AK+ LSS  Q EV L  +       +   K L V +TR++ ESLV +LI+ +
Sbjct:   98 GDAWVESRGKKMAPPQVSAEVLKKMKKTAEDFLGEEVTEAVITVPAYFNDAQRQATKDAGRIAGLDVKRIINEPTAAALAYGIDKKQGDNIVAVYDLGGGTFDISIIEIDNNDGDQTFEVLATNGDTHLGGEDFDNRLINYLADEFKKEQGLDLRNDPLAMQRLKEAAEKAKIELSSTNQTEVNLPYI----TADATGPKHLVVKVTRAKLESLVEDLIQRS 315          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_PORGI (Chaperone protein dnaK OS=Porphyromonas gingivalis GN=dnaK PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.575e-39
Identity = 92/223 (41.26%), Postives = 136/223 (60.99%), Query Frame = 3
Query:   15 VETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDK--RDGLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            V+ +  +++P +I A IL KM+   E YL +  T+AVI+VPA FN+AQR+A K AG+IAGL ++ +V +P AA+LAYGLDK  +D   AV+   GGTF+ SILE+ +GV +VK+       GG DFD +++  L  EF      D    P+ +QR   AAE+AK+ LSS    E+ L  ++ +    + + K L +T+TR++FE L   LI+   A C+   K
Sbjct:  101 VDIDGRLYTPQEISAMILQKMKKTAEDYLGQEVTEAVITVPAYFNDAQRQATKEAGEIAGLKVRRIVNEPTAASLAYGLDKSNKDMKIAVFDLGGGTFDISILELGDGVFEVKSTNGDTHLGGDDFDHVIIDWLAEEFKSQEGVDLRQDPMAMQRLKEAAEKAKIELSSTSSTEINLPYIMPV----NGIPKHLVMTLTRAKFEQLADRLIQACVAPCETALK 319          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_PORG3 (Chaperone protein dnaK OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=dnaK PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.575e-39
Identity = 92/223 (41.26%), Postives = 136/223 (60.99%), Query Frame = 3
Query:   15 VETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDK--RDGLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            V+ +  +++P +I A IL KM+   E YL +  T+AVI+VPA FN+AQR+A K AG+IAGL ++ +V +P AA+LAYGLDK  +D   AV+   GGTF+ SILE+ +GV +VK+       GG DFD +++  L  EF      D    P+ +QR   AAE+AK+ LSS    E+ L  ++ +    + + K L +T+TR++FE L   LI+   A C+   K
Sbjct:  101 VDIDGRLYTPQEISAMILQKMKKTAEDYLGQEVTEAVITVPAYFNDAQRQATKEAGEIAGLKVRRIVNEPTAASLAYGLDKSNKDMKIAVFDLGGGTFDISILELGDGVFEVKSTNGDTHLGGDDFDHVIIDWLAEEFKSQEGVDLRQDPMAMQRLKEAAEKAKIELSSTSSTEINLPYIMPV----NGIPKHLVMTLTRAKFEQLADRLIQACVAPCETALK 319          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_DESAD (Chaperone protein dnaK OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=dnaK PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.633e-38
Identity = 93/226 (41.15%), Postives = 139/226 (61.50%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKR-DGLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+AWVE E   +SP+++ A IL +++   E YL E+ ++AVI+VPA FN++QR+A K AG IAGL+++ ++ +P AA+LAYG DK+ +   AV+   GGTF+ SILE+ + V++V+A       GG DFD  ++++L  EF R +  D S   + LQR   A E+AK  LS+  + EV L  +   Q       K L V I+R++ E LV +L+E T   CQ   K
Sbjct:   98 GDAWVEIEGKKYSPSEVSAIILQQLKKDAETYLGETVSEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAASLAYGFDKKANEKIAVFDLGGGTFDISILEVGDNVVEVRATNGDTFLGGEDFDNAVIQYLVEEFKRENGIDLSADRMALQRLKEAGEKAKKELSTAMETEVNLPFITADQNG----PKHLMVKISRAKLEKLVEDLVERTKVPCQKALK 319          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_SACD2 (Chaperone protein dnaK OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=dnaK PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.133e-38
Identity = 96/222 (43.24%), Postives = 135/222 (60.81%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKR--DGLFAVYSF-GGTFEFSILEISN----GVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEET 647
            G+AWVE +    +P +I A +L KM+   E YL E+ T+AVI+VPA FN++QR+A K AG IAGLD++ ++ +P AAALAYG+DK   D   AVY   GGTF+ SI+EI++       +V +       GG DFDL L+ +L  EF + +  D  + PL LQR   AAE+AK+ LSS  Q EV L  +       +   K L V ++R++ ESLV EL+  +
Sbjct:   99 GDAWVEVKGDKKAPPQISAEVLKKMKKTAEDYLGETVTEAVITVPAYFNDSQRQATKDAGKIAGLDVKRIINEPTAAALAYGMDKSKGDSTIAVYDLGGGTFDISIIEIADVDGEHQFEVLSTNGDTFLGGEDFDLRLIEYLAEEFKKTNGIDLHNDPLALQRLKEAAEKAKIELSSSQQTEVNLPYI----TADATGPKHLVVKLSRAKLESLVEELVNRS 316          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK1_COLP3 (Chaperone protein dnaK 1 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=dnaK1 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.133e-38
Identity = 100/232 (43.10%), Postives = 135/232 (58.19%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKR---DGLFAVYSF-GGTFEFSILEISN----GVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+AWVE +    SP ++ A IL K++   E YL E+ T AVI+VPA FN++QR+A K AG IAGL+++ ++ +P AAALAYG+DK    D    VY   GGTF+ SI+EISN       +V A       GG DFDL L+ +L  EF +    D     L LQR   AAE+AK+ LSS  Q EV L  +       +   K L V +TR++ ESLV +L++ T A C+   K
Sbjct:   98 GDAWVEVDGKALSPQEVSAQILRKLKKDAEAYLGETVTDAVITVPAYFNDSQRQATKDAGKIAGLNVKRIINEPTAAALAYGVDKNSNADQKVVVYDLGGGTFDLSIIEISNVDGEKQFEVLATNGDTFLGGEDFDLRLINYLADEFKKESGIDIHQDTLALQRIKEAAEKAKIELSSALQTEVNLPYV----TADASGPKHLNVKVTRAKLESLVDDLVKSTIAPCEQALK 325          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: HSP71_TRYCR (Heat shock 70 kDa protein, mitochondrial OS=Trypanosoma cruzi GN=MTP70 PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.786e-38
Identity = 97/227 (42.73%), Postives = 138/227 (60.79%), Query Frame = 3
Query:    3 GEAWVETEFGI-FSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDK-RDGLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+AWV+   G  +SP+++ AF+L KM+   E +L    + AV++ PA FN  QR+A K AG IAGL++  VV  P AAALAYGLDK +D + AVY   GGTF+ S+LEI+ GV +VKA       GG DFDL L  ++  EF +    D S+  + LQR   AAE+AK  LS+  + EV   NL  I   +   Q  +++T++RS+FESL  +L++ +   C+   K
Sbjct:  123 GDAWVQDANGKQYSPSQVGAFVLEKMKETAENFLGRKVSNAVVTCPAYFNGPQRQATKDAGTIAGLNVIRVVNGPTAAALAYGLDKTKDSMIAVYDLGGGTFDISVLEIAGGVFEVKATNGDTHLGGEDFDLCLSDYILTEFKKSTGIDLSNERMALQRIREAAEKAKCELSTTMETEV---NLPFITANQDGAQ-HVQMTVSRSKFESLAEKLVQRSLGPCKQCIK 345          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_EHRRG (Chaperone protein dnaK OS=Ehrlichia ruminantium (strain Gardel) GN=dnaK PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.786e-38
Identity = 94/227 (41.41%), Postives = 138/227 (60.79%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRD--GLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+AW++     +SP++I A IL KM+   E +L     KAVI+VPA F++AQR+A K AG IAGLD+  ++ +P AAALAYGL+K D   + AVY   GGTF+ SILEI++GV +VK+       GG DFD  ++ +L  +F +    D     + +QR   AAE+AK+ LSS  + ++ L  L +     S   K L + +TR+ FE+LVS+L++ T   C+   K
Sbjct:  101 GDAWIKVRDKDYSPSQIGALILEKMKETAERHLGCKVEKAVITVPAYFDDAQRQATKDAGKIAGLDVIRIINEPTAAALAYGLNKSDKQKVIAVYDLGGGTFDVSILEIADGVFEVKSTNGDTMLGGEDFDHAIMEYLMDDFKKSTGIDLHSDAMAMQRIKEAAEKAKIELSSRMETDINLPFLSS----DSTGPKHLSLKLTRATFENLVSDLVKRTIEPCKKALK 323          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_MARMS (Chaperone protein dnaK OS=Marinomonas sp. (strain MWYL1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.638e-38
Identity = 98/231 (42.42%), Postives = 136/231 (58.87%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKR--DGLFAVYSF-GGTFEFSILEISN----GVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+AWVE +    +P +I A +L KM+   E YL E  T+AVI+VPA FN++QR+A K AG IAGL+++ ++ +P AAALAYGLDK   D   AVY   GGTF+ SI+EI++       +V +       GG DFD+ ++ +L  EF +    D  + PL LQR   A E+AKV LSS  Q EV L  +       +   K L V +TRS+ ESLV EL+ ++   C+   K
Sbjct:   99 GDAWVEVKGDKKAPPQISAEVLKKMKKTAEDYLGEKVTEAVITVPAYFNDSQRQATKDAGKIAGLEVKRIINEPTAAALAYGLDKSSGDSTIAVYDLGGGTFDISIIEIADVDGEKQFEVLSTNGDTFLGGEDFDMRVIEYLAAEFKKSSGIDLHNDPLALQRLKEAGEKAKVELSSSSQTEVNLPYI----TADATGPKHLNVKLTRSKLESLVEELVLKSLEPCRQALK 325          
The following BLAST results are available for this feature:
BLAST of FC930749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_EHRCJ7.331e-3940.97Chaperone protein dnaK OS=Ehrlichia canis (strain ... [more]
DNAK_SHEAM9.575e-3943.24Chaperone protein dnaK OS=Shewanella amazonensis (... [more]
DNAK_PORGI9.575e-3941.26Chaperone protein dnaK OS=Porphyromonas gingivalis... [more]
DNAK_PORG39.575e-3941.26Chaperone protein dnaK OS=Porphyromonas gingivalis... [more]
DNAK_DESAD1.633e-3841.15Chaperone protein dnaK OS=Desulfovibrio salexigens... [more]
DNAK_SACD22.133e-3843.24Chaperone protein dnaK OS=Saccharophagus degradans... [more]
DNAK1_COLP32.133e-3843.10Chaperone protein dnaK 1 OS=Colwellia psychrerythr... [more]
HSP71_TRYCR2.786e-3842.73Heat shock 70 kDa protein, mitochondrial OS=Trypan... [more]
DNAK_EHRRG2.786e-3841.41Chaperone protein dnaK OS=Ehrlichia ruminantium (s... [more]
DNAK_MARMS3.638e-3842.42Chaperone protein dnaK OS=Marinomonas sp. (strain ... [more]

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Properties
Property NameValue
Genbank descriptionC34010H04EF PostHarvC1 Citrus clementina cDNA clone C34010H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930749 ID=FC930749; Name=FC930749; organism=Citrus clementina; type=EST; length=703bp
AAGGAGAGGCATGGGTGGAGACGGAATTCGGCATATTCTCTCCGGCTAAG
ATACAAGCATTCATCTTAGCCAAAATGAGAGCAATTGGCGAAGTTTATTT
GAAAGAGTCTGCTACAAAGGCCGTGATAAGTGTTCCGGCTTGTTTTAATG
AAGCTCAAAGAGAAGCAATAAAGTATGCCGGTGATATTGCTGGTCTCGAC
ATACAGGGCGTTGTTGAGGATCCCGTAGCTGCCGCACTCGCATATGGCCT
TGATAAGAGAGATGGGCTTTTTGCAGTCTACAGTTTTGGAGGTACATTTG
AGTTTTCGATTTTGGAGATCTCAAATGGTGTCATTAAGGTGAAAGCAAAG
AGAAAATCCTTAAGTCATGGAGGGTTGGACTTCGATTTGTTATTGGTGCG
GCATTTATGGAGGGAATTTACGCGTTGTCATGCATTTGATGCTTCACATT
ACCCACTTGTCCTTCAAAGGTTCTTGGGTGCTGCTGAAAGAGCAAAAGTT
AGACTGTCTTCAGAGCCCCAAGTTGAAGTTAAGCTTCACAACCTGCTCAA
TATTCAGGTGAAGAAATCTCTCGTGCAGAAAGATTTGGAGGTCACAATCA
CGAGGTCTGAGTTTGAATCCTTGGTTAGTGAGTTGATCGAGGAGACTGGG
GCTATTTGTCAAAATGTTTGGAAGTGGCAACATCACGAGGAAGGATCTTG
ATG
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