FC930749

Overview
NameFC930749
Unique NameFC930749
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_LEGPC (Chaperone protein dnaK OS=Legionella pneumophila (strain Corby) GN=dnaK PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.059e-37
Identity = 96/231 (41.56%), Postives = 136/231 (58.87%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKR--DGLFAVYSF-GGTFEFSILEIS----NGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+AWV  +    +P +I A +L KM+   E YL E   +AVI+VPA FN++QR+A K AG IAGL+++ ++ +P AAALAYG+DK+  D + AVY   GGTF+ SI+EI+        +V A       GG DFDL L+ +L  EF +    D  + PL LQR   AAE+AK+ LSS  Q +V L  +       +   K L + +TR++ ESLV +L+E T   C+   K
Sbjct:   99 GDAWVRVKDQDKAPPQISAEVLRKMKKTAEDYLGEEVKEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAYGMDKKRGDSVIAVYDLGGGTFDISIIEIAEVDGEHQFEVLATNGDTFLGGEDFDLALIEYLASEFKKDTGIDLHNDPLALQRLKEAAEKAKIELSSAQQTDVNLPYI----TADASGPKHLNIKLTRAKLESLVEKLVERTIEPCKTALK 325          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_LEGPA (Chaperone protein dnaK OS=Legionella pneumophila (strain Paris) GN=dnaK PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.059e-37
Identity = 96/231 (41.56%), Postives = 136/231 (58.87%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKR--DGLFAVYSF-GGTFEFSILEIS----NGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+AWV  +    +P +I A +L KM+   E YL E   +AVI+VPA FN++QR+A K AG IAGL+++ ++ +P AAALAYG+DK+  D + AVY   GGTF+ SI+EI+        +V A       GG DFDL L+ +L  EF +    D  + PL LQR   AAE+AK+ LSS  Q +V L  +       +   K L + +TR++ ESLV +L+E T   C+   K
Sbjct:   99 GDAWVRVKDQDKAPPQISAEVLRKMKKTAEDYLGEEVKEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAYGMDKKRGDSVIAVYDLGGGTFDISIIEIAEVDGEHQFEVLATNGDTFLGGEDFDLALIEYLASEFKKDTGIDLHNDPLALQRLKEAAEKAKIELSSAQQTDVNLPYI----TADASGPKHLNIKLTRAKLESLVEKLVERTIEPCKTALK 325          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_ALCBS (Chaperone protein dnaK OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=dnaK PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.059e-37
Identity = 98/227 (43.17%), Postives = 133/227 (58.59%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRDG--LFAVYSF-GGTFEFSILEIS----NGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQ 662
            G+AWVE +    +P +I A +L KM+   E YL E+ T+AVI+VPA FN++QR+A K AG IAGLD++ ++ +P AAALAYGLDK+ G    AVY   GGTF+ SI+EI+        +V A       GG DFDL L+  L  +F      D    PL +QR   AAE+AK+ LSS  Q EV L  +       S   K L V +TR++ ESLV +L+  +   C+
Sbjct:   99 GDAWVEVKGEKMAPPQISAQVLKKMKKTAEDYLGEAVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAYGLDKKGGDRTIAVYDLGGGTFDISIIEIAEVDGEHQFEVLATNGDTFLGGEDFDLALINFLADQFKADSGIDLGGDPLAMQRLKEAAEKAKIELSSAEQTEVNLPYI----TADSTGPKHLVVKVTRAKLESLVGDLVTRSLEPCK 321          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_SYNAS (Chaperone protein dnaK OS=Syntrophus aciditrophicus (strain SB) GN=dnaK PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.383e-37
Identity = 91/226 (40.27%), Postives = 132/226 (58.41%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLD-KRDGLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+A +E     +SPA+I + +L KM+   E YL E  T AVI+VPA FN++QR+A K AG IAGL++  ++ +P AAALAYGLD K+D   AV+   GGTF+ SILE+  GV +VK+       GG DFD  ++ +L  EF +    D     + LQR   AAE+AK+ LSS  + ++ L  +       +   K + + +TR+  E+LV ELI+     C+   K
Sbjct:   99 GDAQIEVRGRAYSPAEISSMVLVKMKQTAEDYLGEKITDAVITVPAYFNDSQRQATKDAGKIAGLNVLRIINEPTAAALAYGLDKKKDEKIAVFDLGGGTFDISILELGEGVFEVKSTNGDTHLGGEDFDQRIIDYLVSEFKKDQGIDIRSDKMALQRLKEAAEKAKMELSSSMETDINLPFI----TADASGPKHMNIKLTRARMEALVEELIDRLEGPCRTALK 320          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_SHEPA (Chaperone protein dnaK OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.383e-37
Identity = 95/222 (42.79%), Postives = 135/222 (60.81%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKR--DGLFAVYSF-GGTFEFSILEISN----GVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEET 647
            G+AWVE +    +P +I A IL KM+   E +L E  T+AVI+VPA FN++QR+A K AG IAGL+++ ++ +P AAALAYG+DK+  D + AVY   GGTF+ SI+EI +       +V A       GG DFD  ++++L  EF +    D  + PL +QR   AAE+AK+ LSS  Q EV L  +       +   K L V ITR++ ESLV +LI+ +
Sbjct:   98 GDAWVEAQGRKMAPPQISAEILKKMKKTAEDFLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAYGIDKKQGDNIVAVYDLGGGTFDISIIEIDSVDGEQTFEVLATNGDTHLGGEDFDNRMIKYLADEFKKEQGLDLRNDPLAMQRLKEAAEKAKIELSSTTQTEVNLPYI----TADATGPKHLVVKITRAKLESLVEDLIKRS 315          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_SHEHH (Chaperone protein dnaK OS=Shewanella halifaxensis (strain HAW-EB4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.383e-37
Identity = 95/222 (42.79%), Postives = 135/222 (60.81%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKR--DGLFAVYSF-GGTFEFSILEISN----GVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEET 647
            G+AWVE +    +P +I A IL KM+   E +L E  T+AVI+VPA FN++QR+A K AG IAGL+++ ++ +P AAALAYG+DK+  D + AVY   GGTF+ SI+EI +       +V A       GG DFD  ++++L  EF +    D  + PL +QR   AAE+AK+ LSS  Q EV L  +       +   K L V ITR++ ESLV +LI+ +
Sbjct:   98 GDAWVEAQGKKMAPPQISAEILKKMKKTAEDFLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAYGIDKKQGDNIVAVYDLGGGTFDISIIEIDSVDGEQTFEVLATNGDTHLGGEDFDNRMIKYLADEFKKEQGLDLRNDPLAMQRLKEAAEKAKIELSSTTQTEVNLPYI----TADATGPKHLVVKITRAKLESLVEDLIKRS 315          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_PARD8 (Chaperone protein dnaK OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=dnaK PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.383e-37
Identity = 93/223 (41.70%), Postives = 135/223 (60.54%), Query Frame = 3
Query:   15 VETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDK--RDGLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            V+ E  +++P +I A IL KM+   E YL +  T+AVI+VPA F++AQR+A K AG+IAGL ++ +V +P AA+LAYGLDK  +D   AV+   GGTF+ SILE+ +GV +VK+       GG DFD +++  L  EF R    D    P+ LQR   AAE+AK+ LSS    E+ L  ++ +    + + K L  T+TR++FE L   LI+     C+   K
Sbjct:  101 VDIEGRLYTPQEISAMILQKMKKTAEDYLGQEVTEAVITVPAYFSDAQRQATKEAGEIAGLTVRRIVNEPTAASLAYGLDKTNKDMKIAVFDLGGGTFDISILELGDGVFEVKSTNGDTHLGGDDFDHVIIDWLAEEFEREEGVDLRKDPMALQRLKEAAEKAKIELSSTTSTEINLPYIMPV----NGIPKHLVKTLTRAKFEQLADGLIQACIEPCRQSLK 319          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_GRAFK (Chaperone protein dnaK OS=Gramella forsetii (strain KT0803) GN=dnaK PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.383e-37
Identity = 91/211 (43.13%), Postives = 129/211 (61.14%), Query Frame = 3
Query:   15 VETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKR--DGLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELI 638
            VE +  +++P ++ A +L KM+   E YL +  T+AVI+VPA FN++QR A K AG+IAGL ++ ++ +P AAALAYGLDK+  D   AVY   GGTF+ SILE+ +GV +V +       GG DFD +L+ +L   F +    D    P+ LQR   AAE+AK+ LSS  Q E+ L  +       S   K L  TI+RS+FE L +EL+
Sbjct:  101 VEIDGRLYTPQELSAMVLQKMKKTAEDYLGQDVTEAVITVPAYFNDSQRHATKEAGEIAGLKVRRIINEPTAAALAYGLDKKSQDQKIAVYDLGGGTFDISILELGDGVFEVLSTNGDTHLGGDDFDEVLIDYLADNFKKAEDIDLRKDPMALQRLKEAAEKAKIELSSSSQTEINLPYV----TATSSGPKHLVETISRSKFEQLAAELV 307          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_DESMR (Chaperone protein dnaK OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.383e-37
Identity = 93/222 (41.89%), Postives = 136/222 (61.26%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKR-DGLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQ 662
            G+A+VE E   +SPA+I A IL K++   E YL E  T+AVI+VPA FN+AQR+A K AG IAGL+++ ++ +P AA+LAYG DK+ +   AV+   GGTF+ SILE+ + V++V+A       GG DFD  ++ +L  EF + +  D S   + LQR   A E+AK  LS+  + EV L  +       +   K + V ITR + ESLV +L++ T   C+
Sbjct:   97 GDAYVEVEGKKYSPAEISAIILGKLKKDAEAYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAASLAYGFDKKANEKIAVFDLGGGTFDISILEVGDNVVEVRATNGDTFLGGEDFDHRVISYLVDEFKKENGIDLSQDRMALQRLKEAGEKAKKELSTAMETEVNLPFI----TADASGPKHMMVKITRGKLESLVDDLVKRTVEPCR 314          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_CHLMU (Chaperone protein dnaK OS=Chlamydia muridarum GN=dnaK PE=2 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.383e-37
Identity = 95/226 (42.04%), Postives = 132/226 (58.41%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKR-DGLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+A  E E  +++P +I A IL KM+   E YL E+ T+AVI+VPA FN++QR + K AG IAGLD++ ++ +P AAALAYG+DK  D   AV+   GGTF+ SILEI +GV +V +       GG DFD +++  +  EF +    D S   + LQR   AAE+AK+ LS     E+     + I        K L +T+TR++FE L S LIE T   C    K
Sbjct:  102 GDAVFEVENKLYTPEEIGAQILMKMKETAEAYLGETVTEAVITVPAYFNDSQRASTKDAGRIAGLDVKRIIPEPTAAALAYGIDKEGDKKIAVFDLGGGTFDISILEIGDGVFEVLSTNGDTHLGGDDFDEVIINWMLGEFKKQEGIDLSKDNMALQRLKDAAEKAKIELSGVSSTEIN-QPFITIDANG---PKHLALTLTRAQFEHLASSLIERTKQPCAQALK 323          
The following BLAST results are available for this feature:
BLAST of FC930749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_LEGPC1.059e-3741.56Chaperone protein dnaK OS=Legionella pneumophila (... [more]
DNAK_LEGPA1.059e-3741.56Chaperone protein dnaK OS=Legionella pneumophila (... [more]
DNAK_ALCBS1.059e-3743.17Chaperone protein dnaK OS=Alcanivorax borkumensis ... [more]
DNAK_SYNAS1.383e-3740.27Chaperone protein dnaK OS=Syntrophus aciditrophicu... [more]
DNAK_SHEPA1.383e-3742.79Chaperone protein dnaK OS=Shewanella pealeana (str... [more]
DNAK_SHEHH1.383e-3742.79Chaperone protein dnaK OS=Shewanella halifaxensis ... [more]
DNAK_PARD81.383e-3741.70Chaperone protein dnaK OS=Parabacteroides distason... [more]
DNAK_GRAFK1.383e-3743.13Chaperone protein dnaK OS=Gramella forsetii (strai... [more]
DNAK_DESMR1.383e-3741.89Chaperone protein dnaK OS=Desulfovibrio magneticus... [more]
DNAK_CHLMU1.383e-3742.04Chaperone protein dnaK OS=Chlamydia muridarum GN=d... [more]

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Properties
Property NameValue
Genbank descriptionC34010H04EF PostHarvC1 Citrus clementina cDNA clone C34010H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930749 ID=FC930749; Name=FC930749; organism=Citrus clementina; type=EST; length=703bp
AAGGAGAGGCATGGGTGGAGACGGAATTCGGCATATTCTCTCCGGCTAAG
ATACAAGCATTCATCTTAGCCAAAATGAGAGCAATTGGCGAAGTTTATTT
GAAAGAGTCTGCTACAAAGGCCGTGATAAGTGTTCCGGCTTGTTTTAATG
AAGCTCAAAGAGAAGCAATAAAGTATGCCGGTGATATTGCTGGTCTCGAC
ATACAGGGCGTTGTTGAGGATCCCGTAGCTGCCGCACTCGCATATGGCCT
TGATAAGAGAGATGGGCTTTTTGCAGTCTACAGTTTTGGAGGTACATTTG
AGTTTTCGATTTTGGAGATCTCAAATGGTGTCATTAAGGTGAAAGCAAAG
AGAAAATCCTTAAGTCATGGAGGGTTGGACTTCGATTTGTTATTGGTGCG
GCATTTATGGAGGGAATTTACGCGTTGTCATGCATTTGATGCTTCACATT
ACCCACTTGTCCTTCAAAGGTTCTTGGGTGCTGCTGAAAGAGCAAAAGTT
AGACTGTCTTCAGAGCCCCAAGTTGAAGTTAAGCTTCACAACCTGCTCAA
TATTCAGGTGAAGAAATCTCTCGTGCAGAAAGATTTGGAGGTCACAATCA
CGAGGTCTGAGTTTGAATCCTTGGTTAGTGAGTTGATCGAGGAGACTGGG
GCTATTTGTCAAAATGTTTGGAAGTGGCAACATCACGAGGAAGGATCTTG
ATG
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