FC930749

Overview
NameFC930749
Unique NameFC930749
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_BARBK (Chaperone protein dnaK OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=dnaK PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 7.569e-44
Identity = 106/226 (46.90%), Postives = 141/226 (62.39%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRDG-LFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+AWVE     +SP++I A IL KM+   E YL E   +AVI+VPA FN+AQR+A K AG IAGL++  ++ +P AAALAYGLDK+DG   AVY   GGTF+ S+LEI +GV +VK+       GG DFD+ LV +   EF +    D  +  L LQR   AAE+AK+ LSS  Q EV   NL  I   +S   K L + +TR++FESLV +L++ T   C+   K
Sbjct:   99 GDAWVEENSKKYSPSQISAMILQKMKETAESYLGEKVEQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKDGKTIAVYDLGGGTFDISVLEIGDGVFEVKSTNGDTFLGGEDFDMCLVSYFADEFKKEQGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEV---NLPFITADQS-GPKHLTMKLTRAKFESLVDDLVQRTIEPCKAALK 320          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_RHILO (Chaperone protein dnaK OS=Rhizobium loti GN=dnaK PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 9.885e-44
Identity = 104/226 (46.02%), Postives = 139/226 (61.50%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRDG-LFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+AWVE      SP++I A IL KM+   E YL E   KAVI+VPA FN+AQR+A K AG IAGL++  ++ +P AAALAYGLDK+DG   AVY   GGTF+ S+LEI +GV +VK+       GG DFD+ LV +L  EF +    D  +  L LQR   AAE+AK+ LSS  Q E+ L  +       +   K L + +TR++FESLV +L++ T   C+   K
Sbjct:   99 GDAWVEAGGKKQSPSQISAMILQKMKETAEAYLGEKVEKAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKDGKTIAVYDLGGGTFDISVLEIGDGVFEVKSTNGDTFLGGEDFDMRLVEYLAAEFKKEQGIDLKNDKLALQRLKEAAEKAKIELSSTTQTEINLPFI----TADATGPKHLTLKLTRAKFESLVEDLVQRTIDPCKAALK 320          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_AZOC5 (Chaperone protein dnaK OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=dnaK PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 9.885e-44
Identity = 102/222 (45.95%), Postives = 142/222 (63.96%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRD-GLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQ 662
            G+AWVE++   +SP++I AFIL KM+   E +L E   KAVI+VPA FN+AQR+A K AG IAGL++  ++ +P AAALAYGLDK++ G  AVY   GGTF+ S+LEI +GV +VK+       GG DFD+ LV +L  EF +    D  +  L LQR   AAE+AK+ LSS  Q E+ L  +       +   K L + +TR++FE+LV +LI+ T   C+
Sbjct:   99 GDAWVESDGKKYSPSQISAFILQKMKETAESFLGEKVEKAVITVPAYFNDAQRQATKDAGRIAGLEVLRIINEPTAAALAYGLDKKNSGTIAVYDLGGGTFDVSVLEIGDGVFEVKSTNGDTFLGGEDFDMRLVNYLADEFKKEQGIDLRNDKLALQRLKEAAEKAKIELSSATQTEINLPFI----TADASGPKHLTMKLTRAKFEALVEDLIQRTMEPCR 316          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: GRP75_HUMAN (Stress-70 protein, mitochondrial OS=Homo sapiens GN=HSPA9 PE=1 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 1.291e-43
Identity = 103/222 (46.40%), Postives = 139/222 (62.61%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDK-RDGLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQ 662
            G+AWVE    ++SP++I AF+L KM+   E YL  +A  AVI+VPA FN++QR+A K AG I+GL++  V+ +P AAALAYGLDK  D + AVY   GGTF+ SILEI  GV +VK+       GG DFD  L+RH+ +EF R    D +   + LQR   AAE+AK  LSS  Q ++ L  L       S   K L + +TR++FE +V++LI  T A CQ
Sbjct:  150 GDAWVEAHGKLYSPSQIGAFVLMKMKETAENYLGHTAKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDKSEDKVIAVYDLGGGTFDISILEIQKGVFEVKSTNGDTFLGGEDFDQALLRHIVKEFKRETGVDLTKDNMALQRVREAAEKAKCELSSSVQTDINLPYL----TMDSSGPKHLNMKLTRAQFEGIVTDLIRRTIAPCQ 367          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: GRP75_CRIGR (Stress-70 protein, mitochondrial OS=Cricetulus griseus GN=HSPA9 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.686e-43
Identity = 102/222 (45.95%), Postives = 140/222 (63.06%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDK-RDGLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQ 662
            G+AWVE    ++SP++I AF+L KM+   E YL  +A  AVI+VPA FN++QR+A K AG I+GL++  V+ +P AAALAYGLDK  D + AVY   GGTF+ SILEI  GV +VK+       GG DFD  L+RH+ +EF R    D +   + LQR   AAE+AK  LSS  Q ++ L  L       +   K L + +TR++FE +V++LI+ T A CQ
Sbjct:  150 GDAWVEAHGKLYSPSQIGAFVLMKMKETAENYLGHTAKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDKSEDKIIAVYDLGGGTFDISILEIQKGVFEVKSTNGDTFLGGEDFDQALLRHIVKEFKRETGVDLTKDNMALQRVREAAEKAKCELSSSVQTDINLPYL----TMDASGPKHLNMKLTRAQFEGIVTDLIKRTIAPCQ 367          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_METNO (Chaperone protein dnaK OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=dnaK PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.686e-43
Identity = 104/226 (46.02%), Postives = 140/226 (61.95%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKR-DGLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+AWV  +   FSP++I AF L KM+   E YL +  T+AVI+VPA FN+AQR+A K AG IAGL++  ++ +P AAALAYGLDKR  G+ AVY   GGTF+ SILEI +GV +VK+       GG DFD  +V +L  EF R    D +   L LQR   AAE+AK+ LSS  Q E+ L  +       +   K L + ++R++FESLV +LI+ T   C+   K
Sbjct:   99 GDAWVAADGKQFSPSQISAFTLQKMKETAESYLGQPVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKRKSGVIAVYDLGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDNRIVEYLAAEFKREQGIDLTKDKLALQRLKEAAEKAKIELSSATQTEINLPYI----TADASGPKHLALKLSRAKFESLVDDLIQRTIEPCRKALK 320          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: GRP75_RAT (Stress-70 protein, mitochondrial OS=Rattus norvegicus GN=Hspa9 PE=1 SV=3)

HSP 1 Score: 175.637 bits (444), Expect = 2.202e-43
Identity = 102/222 (45.95%), Postives = 140/222 (63.06%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDK-RDGLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQ 662
            G+AWVE    ++SP++I AF+L KM+   E YL  +A  AVI+VPA FN++QR+A K AG I+GL++  V+ +P AAALAYGLDK  D + AVY   GGTF+ SILEI  GV +VK+       GG DFD  L+RH+ +EF R    D +   + LQR   AAE+AK  LSS  Q ++ L  L       +   K L + +TR++FE +V++LI+ T A CQ
Sbjct:  150 GDAWVEAHGKLYSPSQIGAFVLMKMKETAENYLGHTAKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDKSEDKVIAVYDLGGGTFDISILEIQKGVFEVKSTNGDTFLGGEDFDQALLRHIVKEFKRETGVDLTKDNMALQRVREAAEKAKCELSSSVQTDINLPYL----TMDASGPKHLNMKLTRAQFEGIVTDLIKRTIAPCQ 367          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: GRP75_MOUSE (Stress-70 protein, mitochondrial OS=Mus musculus GN=Hspa9 PE=1 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 2.202e-43
Identity = 102/222 (45.95%), Postives = 140/222 (63.06%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDK-RDGLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQ 662
            G+AWVE    ++SP++I AF+L KM+   E YL  +A  AVI+VPA FN++QR+A K AG I+GL++  V+ +P AAALAYGLDK  D + AVY   GGTF+ SILEI  GV +VK+       GG DFD  L+RH+ +EF R    D +   + LQR   AAE+AK  LSS  Q ++ L  L       +   K L + +TR++FE +V++LI+ T A CQ
Sbjct:  150 GDAWVEAHGKLYSPSQIGAFVLMKMKETAENYLGHTAKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDKSEDKVIAVYDLGGGTFDISILEIQKGVFEVKSTNGDTFLGGEDFDQALLRHIVKEFKRETGVDLTKDNMALQRVREAAEKAKCELSSSVQTDINLPYL----TMDASGPKHLNMKLTRAQFEGIVTDLIKRTIAPCQ 367          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: GRP75_BOVIN (Stress-70 protein, mitochondrial OS=Bos taurus GN=HSPA9 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.202e-43
Identity = 102/222 (45.95%), Postives = 139/222 (62.61%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDK-RDGLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQ 662
            G+AWVE    ++SP++I AF+L KM+   E YL  +A  AVI+VPA FN++QR+A K AG I+GL++  V+ +P AAALAYGLDK  D + AVY   GGTF+ SILEI  GV +VK+       GG DFD  L+RH+ +EF R    D +   + LQR   AAE+AK  LSS  Q ++ L  L       +   K L + +TR++FE +V++LI  T A CQ
Sbjct:  150 GDAWVEAHGKLYSPSQIGAFVLMKMKETAENYLGHTAKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDKSEDKIIAVYDLGGGTFDISILEIQKGVFEVKSTNGDTFLGGEDFDQALLRHIVKEFKRETGVDLTKDNMALQRVREAAEKAKCELSSSVQTDINLPYL----TMDASGPKHLNMKLTRAQFEGIVTDLIRRTIAPCQ 367          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_XANP2 (Chaperone protein dnaK OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.202e-43
Identity = 101/222 (45.50%), Postives = 140/222 (63.06%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRD-GLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQ 662
            G+AWVE +   +SP++I AF+L KM+   E +L E   KAVI+VPA FN+AQR+A K AG IAGL++  ++ +P AAALAYGLDK+  G  AVY   GGTF+ S+LEI +GV +VK+       GG DFD+ LV +L  EF +    D  +  L LQR   AAE+AK+ LSS  Q E+ L  +       +   K L + +TR++FE+LV +LI+ T   C+
Sbjct:   99 GDAWVEADGKKYSPSQISAFVLQKMKETAESFLGEKVEKAVITVPAYFNDAQRQATKDAGRIAGLEVLRIINEPTAAALAYGLDKKSAGTIAVYDLGGGTFDVSVLEIGDGVFEVKSTNGDTFLGGEDFDMRLVTYLADEFKKEQGIDLRNDKLALQRLKEAAEKAKIELSSATQTEINLPFI----TADATGPKHLTLKLTRAKFEALVDDLIQRTVEPCR 316          
The following BLAST results are available for this feature:
BLAST of FC930749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_BARBK7.569e-4446.90Chaperone protein dnaK OS=Bartonella bacilliformis... [more]
DNAK_RHILO9.885e-4446.02Chaperone protein dnaK OS=Rhizobium loti GN=dnaK P... [more]
DNAK_AZOC59.885e-4445.95Chaperone protein dnaK OS=Azorhizobium caulinodans... [more]
GRP75_HUMAN1.291e-4346.40Stress-70 protein, mitochondrial OS=Homo sapiens G... [more]
GRP75_CRIGR1.686e-4345.95Stress-70 protein, mitochondrial OS=Cricetulus gri... [more]
DNAK_METNO1.686e-4346.02Chaperone protein dnaK OS=Methylobacterium nodulan... [more]
GRP75_RAT2.202e-4345.95Stress-70 protein, mitochondrial OS=Rattus norvegi... [more]
GRP75_MOUSE2.202e-4345.95Stress-70 protein, mitochondrial OS=Mus musculus G... [more]
GRP75_BOVIN2.202e-4345.95Stress-70 protein, mitochondrial OS=Bos taurus GN=... [more]
DNAK_XANP22.202e-4345.50Chaperone protein dnaK OS=Xanthobacter autotrophic... [more]

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Properties
Property NameValue
Genbank descriptionC34010H04EF PostHarvC1 Citrus clementina cDNA clone C34010H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930749 ID=FC930749; Name=FC930749; organism=Citrus clementina; type=EST; length=703bp
AAGGAGAGGCATGGGTGGAGACGGAATTCGGCATATTCTCTCCGGCTAAG
ATACAAGCATTCATCTTAGCCAAAATGAGAGCAATTGGCGAAGTTTATTT
GAAAGAGTCTGCTACAAAGGCCGTGATAAGTGTTCCGGCTTGTTTTAATG
AAGCTCAAAGAGAAGCAATAAAGTATGCCGGTGATATTGCTGGTCTCGAC
ATACAGGGCGTTGTTGAGGATCCCGTAGCTGCCGCACTCGCATATGGCCT
TGATAAGAGAGATGGGCTTTTTGCAGTCTACAGTTTTGGAGGTACATTTG
AGTTTTCGATTTTGGAGATCTCAAATGGTGTCATTAAGGTGAAAGCAAAG
AGAAAATCCTTAAGTCATGGAGGGTTGGACTTCGATTTGTTATTGGTGCG
GCATTTATGGAGGGAATTTACGCGTTGTCATGCATTTGATGCTTCACATT
ACCCACTTGTCCTTCAAAGGTTCTTGGGTGCTGCTGAAAGAGCAAAAGTT
AGACTGTCTTCAGAGCCCCAAGTTGAAGTTAAGCTTCACAACCTGCTCAA
TATTCAGGTGAAGAAATCTCTCGTGCAGAAAGATTTGGAGGTCACAATCA
CGAGGTCTGAGTTTGAATCCTTGGTTAGTGAGTTGATCGAGGAGACTGGG
GCTATTTGTCAAAATGTTTGGAAGTGGCAACATCACGAGGAAGGATCTTG
ATG
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