FC930749

Overview
NameFC930749
Unique NameFC930749
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_WOLWR (Chaperone protein dnaK OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=dnaK PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.061e-41
Identity = 101/223 (45.29%), Postives = 140/223 (62.78%), Query Frame = 3
Query:    3 GEAWVET-EFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRDG-LFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQ 662
            G+AWV+T +   +SP++I AFIL  M+   E YL E    AVI+VPA FN++QR+A K AG IAGL++  +V +P AAALAYGLDK+ G    VY   GGTF+ SILEI +GV +VKA       GG DFD  +V +L  EF + +  D  + P+ +QR   AAE+AK+ LSS  + E+ L  +       +   K L + +TR++ ESLV++LIE T A C+
Sbjct:   97 GDAWVKTTDNKEYSPSQIGAFILQNMKEAAEAYLGEEVKDAVITVPAYFNDSQRQATKDAGKIAGLNVLRIVNEPTAAALAYGLDKKHGHTIVVYDLGGGTFDVSILEIGDGVFEVKATNGDTHLGGEDFDNGVVSYLLDEFKKSNGIDLKNDPMAMQRIKEAAEKAKIELSSAMETEINLPFI----TADASGPKHLNMKLTRAKLESLVNDLIERTMAPCK 315          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_WOLPM (Chaperone protein dnaK OS=Wolbachia pipientis wMel GN=dnaK PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.061e-41
Identity = 101/223 (45.29%), Postives = 140/223 (62.78%), Query Frame = 3
Query:    3 GEAWVET-EFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRDG-LFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQ 662
            G+AWV+T +   +SP++I AFIL  M+   E YL E    AVI+VPA FN++QR+A K AG IAGL++  +V +P AAALAYGLDK+ G    VY   GGTF+ SILEI +GV +VKA       GG DFD  +V +L  EF + +  D  + P+ +QR   AAE+AK+ LSS  + E+ L  +       +   K L + +TR++ ESLV++LIE T A C+
Sbjct:   97 GDAWVKTTDNKEYSPSQIGAFILQNMKEAAEAYLGEEVKDAVITVPAYFNDSQRQATKDAGKIAGLNVLRIVNEPTAAALAYGLDKKHGHTIVVYDLGGGTFDVSILEIGDGVFEVKATNGDTHLGGEDFDNGVVSYLLDEFKKSNGIDLKNDPMAMQRIKEAAEKAKIELSSAMETEINLPFI----TADASGPKHLNMKLTRAKLESLVNDLIERTMAPCK 315          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_RICBR (Chaperone protein dnaK OS=Rickettsia bellii (strain RML369-C) GN=dnaK PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.061e-41
Identity = 105/226 (46.46%), Postives = 134/226 (59.29%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDK-RDGLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+AWVE E    SP++I AFIL KM+   E YL E  T+AVI+VPA FN+AQR+A K AG IAGL++  ++ +P AAALAYG DK      AVY   GGTF+ SILEI +GV +VK+       GG DFD  ++ HL   F +    D  + PL LQR   AAE+AK  LSS    ++   NL  I    S   K L +  TR+E E LV +LIE+T   C+   K
Sbjct:   98 GDAWVEVEGKKHSPSQISAFILQKMKETAENYLGEKVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGFDKSASKTIAVYDLGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDTRILEHLINTFKKESGIDLRNDPLALQRLKEAAEKAKKELSSALTTDI---NLPYITADNS-GPKHLNIKFTRAELEKLVDDLIEKTIEPCRKALK 319          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_RHOCS (Chaperone protein dnaK OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=dnaK PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.061e-41
Identity = 98/226 (43.36%), Postives = 138/226 (61.06%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKR-DGLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+AWVE+    +SP++I AFIL KM+   E YL E  T+AVI+VPA FN++QR+A K AG IAGL++  ++ +P AAALAYG++K+  G  AVY   GGTF+ S+LEI +GV +VK+       GG DFD  ++ +L  EF +    D     L LQR   AAE+AK+ LS+  Q EV L  +       +   K L + +TRS+ E+LV +L+  T   C+   K
Sbjct:   99 GDAWVESHGKQYSPSEISAFILQKMKETAENYLGEKVTQAVITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAALAYGMEKKGTGTIAVYDLGGGTFDISVLEIGDGVFEVKSTNGDTFLGGEDFDAKIIDYLAEEFQKEQGIDLRKDRLALQRLKEAAEKAKIELSASMQTEVNLPFI----TADASGPKHLNIKLTRSKLEALVDDLVRRTIEPCKAALK 320          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_SILPO (Chaperone protein dnaK OS=Silicibacter pomeroyi GN=dnaK PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.692e-41
Identity = 100/226 (44.25%), Postives = 142/226 (62.83%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRDG-LFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+AWVE +   +SP++I A IL KM+   E YL E  T+AVI+VPA FN+AQR+A K AG IAGL++  ++ +P AAALAYGLDK++    AVY   GGTF+ +ILEI +G+ +VK+       GG DFD+ +V +L  EF + H  D S   + LQR   AAE+AK+ LSS  Q E+   N   I +  +     L + +TR++ ESLV +LI+++   C+   K
Sbjct:   98 GDAWVEAKGEKYSPSQISAVILGKMKETAESYLGEEVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKNSQTIAVYDLGGGTFDVTILEIDDGLFEVKSTNGDTFLGGEDFDMRIVNYLADEFKKEHGVDLSGDKMALQRLKEAAEKAKIELSSTTQTEI---NQPFISMGANGQPLHLVMKLTRAKLESLVGDLIKKSMDPCKAALK 320          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_ROSDO (Chaperone protein dnaK OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=dnaK PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.692e-41
Identity = 99/226 (43.81%), Postives = 142/226 (62.83%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDK-RDGLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+AWVE +   +SP++I AFIL KM+   E YL E  T+AVI+VPA FN+AQR+A K AG IAGL++  ++ +P AAALAYGLDK +    AVY   GGTF+ +ILEI +G+ +VK+       GG DFD+ +V +L   F + H+ D +   + LQR   AAE+AK+ LSS  Q E+   N   I +  +     + + +TRS+ ESLV +LI+ +   C++  K
Sbjct:   98 GDAWVEAKGEKYSPSQISAFILGKMKETAESYLGEDVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKEQTQTIAVYDLGGGTFDVTILEIDDGLFEVKSTNGDTFLGGEDFDMRIVNYLADTFKKEHSVDLTQDKMALQRLKEAAEKAKIELSSSSQTEI---NQPFISMGSNGQPLHMVMKLTRSKLESLVGDLIKASLKPCKDALK 320          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_RICPU (Chaperone protein dnaK OS=Rickettsia peacockii (strain Rustic) GN=dnaK PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.692e-41
Identity = 100/222 (45.05%), Postives = 135/222 (60.81%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDK-RDGLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQ 662
            G+AWVE +   +SP++I AFIL KM+   E YL +  T+AVI+VPA FN+AQR+A K AG IAGL++  ++ +P AAALAYG +K      AVY   GGTF+ SILEI++GV +VK+       GG DFD  ++ HL   F + +  D S+ PL LQR   AAE+AK  LSS     + L  +       S   K L +  TR+E E LV +LIE+T   C+
Sbjct:   98 GDAWVEADNNKYSPSQISAFILQKMKETAENYLGDKVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGFEKSASKTIAVYDLGGGTFDVSILEIADGVFEVKSTNGDTFLGGEDFDTRILNHLIDVFKKENGIDLSNDPLALQRLKEAAEKAKKELSSAVTTNINLPYI----TADSSGPKHLNIKFTRAELEKLVDDLIEKTIEPCR 315          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_RICCN (Chaperone protein dnaK OS=Rickettsia conorii GN=dnaK PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.692e-41
Identity = 100/222 (45.05%), Postives = 135/222 (60.81%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDK-RDGLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQ 662
            G+AWVE +   +SP++I AFIL KM+   E YL +  T+AVI+VPA FN+AQR+A K AG IAGL++  ++ +P AAALAYG +K      AVY   GGTF+ SILEI++GV +VK+       GG DFD  ++ HL   F + +  D S  PL LQR   AAE+AK  LSS    ++ L  +       S   K L +  TR+E E LV +LIE+T   C+
Sbjct:   98 GDAWVEADNNKYSPSQISAFILQKMKETAENYLGDKVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGFEKSASKTIAVYDLGGGTFDVSILEIADGVFEVKSTNGDTFLGGEDFDTRILNHLIDVFKKENGIDLSKDPLALQRLKEAAEKAKKELSSAVTTDINLPYI----TADSSGPKHLNIKFTRAELEKLVDDLIEKTIEPCR 315          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_RICAE (Chaperone protein dnaK OS=Rickettsia africae (strain ESF-5) GN=dnaK PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.692e-41
Identity = 100/222 (45.05%), Postives = 135/222 (60.81%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDK-RDGLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQ 662
            G+AWVE +   +SP++I AFIL KM+   E YL +  T+AVI+VPA FN+AQR+A K AG IAGL++  ++ +P AAALAYG +K      AVY   GGTF+ SILEI++GV +VK+       GG DFD  ++ HL   F + +  D S  PL LQR   AAE+AK  LSS    ++ L  +       S   K L +  TR+E E LV +LIE+T   C+
Sbjct:   98 GDAWVEADNNKYSPSQISAFILQKMKETAENYLGDKVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGFEKSASKTIAVYDLGGGTFDVSILEIADGVFEVKSTNGDTFLGGEDFDTRILNHLIDVFKKENGIDLSKDPLALQRLKEAAEKAKKELSSAVTTDINLPYI----TADSSGPKHLNIKFTRAELEKLVDDLIEKTIEPCR 315          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_NOVAD (Chaperone protein dnaK OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=dnaK PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.516e-41
Identity = 99/222 (44.59%), Postives = 134/222 (60.36%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRDG-LFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQ 662
            G+AWV+     +SP++I AF L KM+   E YL E+ T+AVI+VPA FN+AQR+A K AG IAGL++  ++ +P AAALAYGLDK+DG   AVY   GGTF+ SILEI +GV +VK+       GG DFD  +V +L  +F      D     L LQR   AAE+AK+ LSS    E+ L  +       +     L  T+TR++ E LV+ LI+ T   C+
Sbjct:   99 GDAWVKAGGQDYSPSQISAFTLQKMKETAEAYLGETVTQAVITVPAYFNDAQRQATKDAGQIAGLEVLRIINEPTAAALAYGLDKQDGKTIAVYDLGGGTFDISILEIGDGVFEVKSTNGDTFLGGEDFDTAVVEYLADKFKAKEGMDLKTDKLALQRLKEAAEKAKIELSSAQTTEINLPFITARMEGGATTPLHLVETVTRADLEKLVAGLIQRTLDPCK 320          
The following BLAST results are available for this feature:
BLAST of FC930749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_WOLWR2.061e-4145.29Chaperone protein dnaK OS=Wolbachia sp. subsp. Dro... [more]
DNAK_WOLPM2.061e-4145.29Chaperone protein dnaK OS=Wolbachia pipientis wMel... [more]
DNAK_RICBR2.061e-4146.46Chaperone protein dnaK OS=Rickettsia bellii (strai... [more]
DNAK_RHOCS2.061e-4143.36Chaperone protein dnaK OS=Rhodospirillum centenum ... [more]
DNAK_SILPO2.692e-4144.25Chaperone protein dnaK OS=Silicibacter pomeroyi GN... [more]
DNAK_ROSDO2.692e-4143.81Chaperone protein dnaK OS=Roseobacter denitrifican... [more]
DNAK_RICPU2.692e-4145.05Chaperone protein dnaK OS=Rickettsia peacockii (st... [more]
DNAK_RICCN2.692e-4145.05Chaperone protein dnaK OS=Rickettsia conorii GN=dn... [more]
DNAK_RICAE2.692e-4145.05Chaperone protein dnaK OS=Rickettsia africae (stra... [more]
DNAK_NOVAD3.516e-4144.59Chaperone protein dnaK OS=Novosphingobium aromatic... [more]

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Properties
Property NameValue
Genbank descriptionC34010H04EF PostHarvC1 Citrus clementina cDNA clone C34010H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930749 ID=FC930749; Name=FC930749; organism=Citrus clementina; type=EST; length=703bp
AAGGAGAGGCATGGGTGGAGACGGAATTCGGCATATTCTCTCCGGCTAAG
ATACAAGCATTCATCTTAGCCAAAATGAGAGCAATTGGCGAAGTTTATTT
GAAAGAGTCTGCTACAAAGGCCGTGATAAGTGTTCCGGCTTGTTTTAATG
AAGCTCAAAGAGAAGCAATAAAGTATGCCGGTGATATTGCTGGTCTCGAC
ATACAGGGCGTTGTTGAGGATCCCGTAGCTGCCGCACTCGCATATGGCCT
TGATAAGAGAGATGGGCTTTTTGCAGTCTACAGTTTTGGAGGTACATTTG
AGTTTTCGATTTTGGAGATCTCAAATGGTGTCATTAAGGTGAAAGCAAAG
AGAAAATCCTTAAGTCATGGAGGGTTGGACTTCGATTTGTTATTGGTGCG
GCATTTATGGAGGGAATTTACGCGTTGTCATGCATTTGATGCTTCACATT
ACCCACTTGTCCTTCAAAGGTTCTTGGGTGCTGCTGAAAGAGCAAAAGTT
AGACTGTCTTCAGAGCCCCAAGTTGAAGTTAAGCTTCACAACCTGCTCAA
TATTCAGGTGAAGAAATCTCTCGTGCAGAAAGATTTGGAGGTCACAATCA
CGAGGTCTGAGTTTGAATCCTTGGTTAGTGAGTTGATCGAGGAGACTGGG
GCTATTTGTCAAAATGTTTGGAAGTGGCAACATCACGAGGAAGGATCTTG
ATG
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