FC930749

Overview
NameFC930749
Unique NameFC930749
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: HSP71_LEIMA (Heat shock 70-related protein 1, mitochondrial OS=Leishmania major GN=HSP70.1 PE=3 SV=3)

HSP 1 Score: 162.925 bits (411), Expect = 1.477e-39
Identity = 101/227 (44.49%), Postives = 137/227 (60.35%), Query Frame = 3
Query:    3 GEAWVETEFGI-FSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDK-RDGLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+AWV+   G  +SP++I AF+L KM+   E +L    + AV++ PA FN+AQR+A K AG IAGL++  VV +P AAALAYG+DK +D L AVY   GGTF+ S+LEI+ GV +VKA       GG DFDL L  ++  EF +    D S   + LQR   AAE+AK  LSS  + EV   NL  I       Q  +++ I+RS+FE +   LIE + A C+   K
Sbjct:  123 GDAWVQDGNGKQYSPSQIGAFVLEKMKETAENFLGHKVSNAVVTCPAYFNDAQRQATKDAGTIAGLNVIRVVNEPTAAALAYGMDKTKDSLIAVYDLGGGTFDISVLEIAGGVFEVKATNGDTHLGGEDFDLALSDYILEEFRKTSGIDLSKERMALQRVREAAEKAKCELSSAMETEV---NLPFITANADGAQ-HIQMRISRSKFEGITQRLIERSIAPCKQCMK 345          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_SPHWW (Chaperone protein dnaK OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=dnaK PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.477e-39
Identity = 97/217 (44.70%), Postives = 131/217 (60.37%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRDG-LFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEET 647
            G+AWV+     +SP++I AF L KM+   E YL E+ T+AVI+VPA FN+AQR+A K AG IAGL++  ++ +P AAALAYGL+K DG   AVY   GGTF+ SILEI +GV +VK+       GG DFD  LV     +F +    D +   L LQR   AAE+AK+ LSS    EV L  +       +   K L  ++TR++ E LV  LI+ +
Sbjct:   99 GDAWVQAGGEDYSPSQISAFTLQKMKETAESYLGETVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLEKNDGKTIAVYDLGGGTFDISILEIGDGVFEVKSTNGDTFLGGEDFDAKLVEFFAADFQKAEGIDLTKDRLALQRLKEAAEKAKIELSSAQTTEVNLPFI----TADATGPKHLVKSLTRADLERLVEPLIQRS 311          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_RHILE (Chaperone protein dnaK OS=Rhizobium leguminosarum GN=dnaK PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.477e-39
Identity = 98/226 (43.36%), Postives = 134/226 (59.29%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRDG-LFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+AWVE     +SPA+I A IL KM+   E YL E   KAVI+VPA FN+A+    +      GL++  ++ +P AAALAYGLDK++G   AVY   GGTF+ SILEI +GV +VK+       GG DFD+ LV +L  EF R +  D  +  L LQR   AAE+AK+ LSS  Q E+ L  +       +   K L + +TR++ ESLV +L++ T A C+   K
Sbjct:   99 GDAWVEANGKGYSPAQISAMILQKMKETAESYLGEKVEKAVITVPAYFNDARPGQPRMPAASLGLEVLRIINEPTAAALAYGLDKKEGKTIAVYDLGGGTFDISILEIGDGVFEVKSTNGDTFLGGEDFDMRLVEYLVAEFKRDNGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEINLPFI----TADASGPKHLTLKLTRAKLESLVDDLVQRTIAPCKAALK 320          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_BORHD (Chaperone protein dnaK OS=Borrelia hermsii (strain DAH) GN=dnaK PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.929e-39
Identity = 93/214 (43.46%), Postives = 135/214 (63.08%), Query Frame = 3
Query:   39 SPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKR-DGLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            SP +I A  L KM+   E YL E+ T+AVI+VPA FN+AQR+A K AG IAGLD++ +V +P AAALAYG++K+ + + AVY   GGTF+ SILE+ +GV +VK+       GG +FD  +++HL  EF +  A D S+  + LQR   AAE+AK+ LSS  +  + L  +       +   K L+ T+TR++FE +V  L+++T   C N  K
Sbjct:  111 SPPEISAATLTKMKETAEAYLGETVTEAVITVPAYFNDAQRQATKDAGKIAGLDVKRIVNEPTAAALAYGIEKKNEEIVAVYDLGGGTFDISILELGDGVFEVKSTNGDTHLGGDNFDDEIIKHLITEFKKDSAIDLSNDKMALQRLKEAAEKAKIELSSAQEASINLPFI----TADANGPKHLQYTLTRAKFEQMVDHLVQKTKEPCLNAIK 320          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_NEOSM (Chaperone protein dnaK OS=Neorickettsia sennetsu (strain Miyayama) GN=dnaK PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.520e-39
Identity = 95/227 (41.85%), Postives = 135/227 (59.47%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRDGLFAVYSF---GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+AW+E     +SP++I A +L K++   E Y  +  TKAVI+VPA F++AQR+A K AG IAGL++  ++ +P AAALAYGLDK      +  F   GGTF+ SILE+ +GV +VKA       GG DFD +++  L  EF + +  D  + PL LQR   AAE+AK  LSS  + ++ L  +       +   K L V  TR++ ESLVS+LI+ T   C+   K
Sbjct:   97 GDAWIEAGGKSYSPSQIGANVLIKLKEAAETYTGKKVTKAVITVPAYFDDAQRQATKDAGRIAGLEVLRIINEPTAAALAYGLDKTATTKNIAVFDLGGGTFDVSILELGDGVFEVKATNGDTHLGGEDFDRMILNFLVEEFKKENGMDLKNDPLALQRLKEAAEKAKKELSSTQETDINLPYI----TADAAGPKHLNVKFTRAKLESLVSDLIDRTIEPCKKALK 319          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_CAUSK (Chaperone protein dnaK OS=Caulobacter sp. (strain K31) GN=dnaK PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.520e-39
Identity = 99/226 (43.81%), Postives = 135/226 (59.73%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRDG-LFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+AWV+     +SP ++ AFIL KM+   E +L E  TKAVI+VPA FN+AQR+A K AG IAGL++  ++ +P AAALAYGL+  +G   AVY   GGTF+ S+LEI +GV +VK+       GG DFDL +V +L  EF +    D     L LQR    AE+AK  LSS  Q EV L   +++     L    L + ++RS+ E+LV +LI  T   C+   K
Sbjct:   99 GDAWVKAHGKDYSPQEVSAFILQKMKEAAESHLGEPVTKAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLEMNEGKKIAVYDLGGGTFDVSVLEIGDGVFEVKSTNGDTFLGGEDFDLRIVDYLADEFKKEQGVDLRKDKLALQRLREEAEKAKKELSSTAQYEVNL-PFISMNASGPL---HLNIKLSRSKLEALVEDLITRTIGPCEQALK 320          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: HSP7E_DROME (Heat shock 70 kDa protein cognate 5 OS=Drosophila melanogaster GN=Hsc70-5 PE=1 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 3.291e-39
Identity = 97/223 (43.50%), Postives = 133/223 (59.64%), Query Frame = 3
Query:    3 GEAWVETEFG-IFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDK-RDGLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQ 662
            G+AWV +  G ++SP++I AFIL KM+   E YL      AV++VPA FN++QR+A K AG IAGL++  V+ +P AAALAYG+DK  D + AVY   GGTF+ SILEI  GV +VK+       GG DFD  +V  L  EF +    D     + +QR   AAE+AK  LSS  Q ++ L  L       +   + + + +TRS+ ESLV +LI+ T   CQ
Sbjct:  149 GDAWVSSTDGKVYSPSQIGAFILMKMKETAEAYLNTPVKNAVVTVPAYFNDSQRQATKDAGQIAGLNVLRVINEPTAAALAYGMDKTEDKIIAVYDLGGGTFDISILEIQKGVFEVKSTNGDTLLGGEDFDNHIVNFLVAEFKKDSGIDIRKDNIAMQRLKEAAEKAKCELSSSQQTDINLPYL----TMDAAGPQHMNLKLTRSKLESLVGDLIKRTIQPCQ 367          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_DESAA (Chaperone protein dnaK OS=Desulfatibacillum alkenivorans (strain AK-01) GN=dnaK PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.291e-39
Identity = 96/226 (42.48%), Postives = 139/226 (61.50%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKR-DGLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+A++E +   +SP +I +FILA ++   E YL E+ T AVI+VPA FN++QR+A K AG IAGL++  ++ +P AA+LAYGLDK+ D   AV+   GGTF+ SILEI  GV +VK+       GG DFDLL++ +L  EF +    D     + LQR   AAE+AK+ LS+  + EV L  +       +   K L V +TR++ ESLVS+L+++    C    K
Sbjct:   99 GDAYIELQGKKYSPQEISSFILAYIKKAAEEYLGETVTDAVITVPAYFNDSQRQATKDAGKIAGLNVLRIINEPTAASLAYGLDKKSDEKIAVFDLGGGTFDVSILEIGEGVFEVKSTNGDTHLGGEDFDLLVIDYLADEFKKDQGIDLRSDKMALQRLKEAAEKAKMELSTSVETEVNLPFI----TADASGPKHLNVKLTRAKLESLVSDLLDKLEGPCVTALK 320          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_DESDG (Chaperone protein dnaK OS=Desulfovibrio desulfuricans (strain G20) GN=dnaK PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.298e-39
Identity = 92/222 (41.44%), Postives = 140/222 (63.06%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKR-DGLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQ 662
            G+A+VE E   +SPA++ A +LAK++A  E YL E+ T+AVI+VPA FN++QR++ K AG IAGLD++ ++ +P AA+LAYG DK+ +   AV+   GGTF+ SILE+ + V++V+A       GG DFD  ++ +L  EF R +  D S   + LQR   AAE+AK  LS+  + E+ L  +   Q       K L + ++R++ E LV +L+E T   C+
Sbjct:   98 GDAYVEIEGRKYSPAEVSAMVLAKLKADAEAYLGETVTEAVITVPAYFNDSQRQSTKDAGRIAGLDVKRIINEPTAASLAYGFDKKANEKIAVFDLGGGTFDISILEVGDNVVEVRATNGDTFLGGEDFDQRVINYLVEEFRRENGIDLSRDRMALQRLKEAAEKAKKDLSTSMETEINLPFITADQTG----PKHLMIKLSRAKLEKLVEDLVERTIEPCR 315          
BLAST of FC930749 vs. ExPASy Swiss-Prot
Match: DNAK_EHRSE (Chaperone protein dnaK OS=Ehrlichia sennetsu GN=dnaK PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.331e-39
Identity = 94/227 (41.41%), Postives = 134/227 (59.03%), Query Frame = 3
Query:    3 GEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRDGLFAVYSF---GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQNVWK 674
            G+AW+E     +SP+++ A +L K++   E Y  +  TKAVI+VPA F++AQR A K AG IAGL++  ++ +P AAALAYGLDK      +  F   GGTF+ SILE+ +GV +VKA       GG DFD +++  L  EF + +  D  + PL LQR   AAE+AK  LSS  + ++ L  +       +   K L V  TR++ ESLVS+LI+ T   C+   K
Sbjct:   97 GDAWIEAGGKSYSPSQVGANVLIKLKEAAETYTGKKVTKAVITVPAYFDDAQRTATKDAGRIAGLEVLRIINEPTAAALAYGLDKTATTKNIAVFDLGGGTFDVSILELGDGVFEVKATNGDTHLGGEDFDRMILNFLVEEFKKENGMDLKNDPLALQRLKEAAEKAKKELSSTQETDINLPYI----TADAAGPKHLNVKFTRAKLESLVSDLIDRTIEPCKKALK 319          
The following BLAST results are available for this feature:
BLAST of FC930749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP71_LEIMA1.477e-3944.49Heat shock 70-related protein 1, mitochondrial OS=... [more]
DNAK_SPHWW1.477e-3944.70Chaperone protein dnaK OS=Sphingomonas wittichii (... [more]
DNAK_RHILE1.477e-3943.36Chaperone protein dnaK OS=Rhizobium leguminosarum ... [more]
DNAK_BORHD1.929e-3943.46Chaperone protein dnaK OS=Borrelia hermsii (strain... [more]
DNAK_NEOSM2.520e-3941.85Chaperone protein dnaK OS=Neorickettsia sennetsu (... [more]
DNAK_CAUSK2.520e-3943.81Chaperone protein dnaK OS=Caulobacter sp. (strain ... [more]
HSP7E_DROME3.291e-3943.50Heat shock 70 kDa protein cognate 5 OS=Drosophila ... [more]
DNAK_DESAA3.291e-3942.48Chaperone protein dnaK OS=Desulfatibacillum alkeni... [more]
DNAK_DESDG4.298e-3941.44Chaperone protein dnaK OS=Desulfovibrio desulfuric... [more]
DNAK_EHRSE7.331e-3941.41Chaperone protein dnaK OS=Ehrlichia sennetsu GN=dn... [more]

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Properties
Property NameValue
Genbank descriptionC34010H04EF PostHarvC1 Citrus clementina cDNA clone C34010H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930749 ID=FC930749; Name=FC930749; organism=Citrus clementina; type=EST; length=703bp
AAGGAGAGGCATGGGTGGAGACGGAATTCGGCATATTCTCTCCGGCTAAG
ATACAAGCATTCATCTTAGCCAAAATGAGAGCAATTGGCGAAGTTTATTT
GAAAGAGTCTGCTACAAAGGCCGTGATAAGTGTTCCGGCTTGTTTTAATG
AAGCTCAAAGAGAAGCAATAAAGTATGCCGGTGATATTGCTGGTCTCGAC
ATACAGGGCGTTGTTGAGGATCCCGTAGCTGCCGCACTCGCATATGGCCT
TGATAAGAGAGATGGGCTTTTTGCAGTCTACAGTTTTGGAGGTACATTTG
AGTTTTCGATTTTGGAGATCTCAAATGGTGTCATTAAGGTGAAAGCAAAG
AGAAAATCCTTAAGTCATGGAGGGTTGGACTTCGATTTGTTATTGGTGCG
GCATTTATGGAGGGAATTTACGCGTTGTCATGCATTTGATGCTTCACATT
ACCCACTTGTCCTTCAAAGGTTCTTGGGTGCTGCTGAAAGAGCAAAAGTT
AGACTGTCTTCAGAGCCCCAAGTTGAAGTTAAGCTTCACAACCTGCTCAA
TATTCAGGTGAAGAAATCTCTCGTGCAGAAAGATTTGGAGGTCACAATCA
CGAGGTCTGAGTTTGAATCCTTGGTTAGTGAGTTGATCGAGGAGACTGGG
GCTATTTGTCAAAATGTTTGGAAGTGGCAACATCACGAGGAAGGATCTTG
ATG
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