FC930756
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930756 vs. ExPASy Swiss-Prot
Match: AGL8_ARATH (Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8 PE=1 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 4.992e-40 Identity = 88/171 (51.46%), Postives = 125/171 (73.10%), Query Frame = 1 Query: 70 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPE---PNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 573 LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEVALI+FS++GKL+E+ + S M + LERY + Y + +VS E L E+ KLKAR E L++++RN +GE+L L+ KEL+SLE QLD ++K IRS + Q M ++++ LQ K++ L + N +L +++ E Sbjct: 8 LKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTDSCMERILERYDRYLYSDKQLVGRDVSQSENWVL----EHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLKKIKE 174
BLAST of FC930756 vs. ExPASy Swiss-Prot
Match: AGL8_SOLTU (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 6.520e-40 Identity = 87/168 (51.79%), Postives = 121/168 (72.02%), Query Frame = 1 Query: 70 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 573 LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEV LI+FS +GKL+E+ + S M + LERY++ ++ A V S E+ KLKAR E LQR+Q++ +GE+L LN KEL++LE QLD +LK IRS + Q M ++++ LQ +++ L E N L +++ E Sbjct: 8 LKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERLLERYERYSF-AERQLVPTDHTSPGSWTLEHAKLKARLEVLQRNQKHYVGEDLESLNMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKE 174
BLAST of FC930756 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.453e-39 Identity = 87/171 (50.88%), Postives = 124/171 (72.51%), Query Frame = 1 Query: 70 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPE---PNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 573 LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEVAL+IFS++GKL+E+ + S M K LERY + Y + ++S E L E+ KLKAR E L++++RN +GE+L L+ KEL+SLE QL ++K IRS + Q M ++++ LQ K+++L + N L +++ E Sbjct: 8 LKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTDSCMEKILERYDRYLYSDKQLVGRDISQSENWVL----EHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLHAAIKSIRSRKNQAMFESISALQKKDKVLQDHNNALLKKIKE 174
BLAST of FC930756 vs. ExPASy Swiss-Prot
Match: AGL13_ARATH (Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana GN=AGL13 PE=2 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 3.578e-38 Identity = 93/185 (50.27%), Postives = 128/185 (69.19%), Query Frame = 1 Query: 70 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSS--QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRL----MEGYQVNTLQLNP 606 +KRIENKI RQVTF+KR++GLLKKAYELSVLCDAEV+LIIFS GKLYEF S+ + +T+ERY +C + N+ + LE + +QE KLK +YE+L R+ RNL+GE+L ++ KEL++LERQL+ +L R +TQ M++ + EL+ KE+ L + N LK +G+Q L LNP Sbjct: 8 VKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEF-SNVGVGRTIERYYRC-----KDNLLDNDTLEDTQGLRQEVTKLKCKYESLLRTHRNLVGEDLEGMSIKELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDINNKLKLETEDHDFKGFQ--DLLLNP 184
BLAST of FC930756 vs. ExPASy Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 7.970e-38 Identity = 85/168 (50.60%), Postives = 119/168 (70.83%), Query Frame = 1 Query: 70 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 573 LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEV LI+FS +GKL+E+ + S M + LERY++ ++ A + V S E KLKAR E LQR+++ +GE+L LN KEL++LE QL +LK IRS + Q M ++++ LQ +++ L E N L +++ E Sbjct: 8 LKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYATDSCMERLLERYERYSF-AEKQLVPTDHTSPGSWTLENAKLKARLEVLQRNEKLYVGEDLESLNMKELQNLEHQLASALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKE 174
BLAST of FC930756 vs. ExPASy Swiss-Prot
Match: AGL1_ARATH (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1 PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.963e-36 Identity = 85/180 (47.22%), Postives = 120/180 (66.67%), Query Frame = 1 Query: 70 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPS 609 +KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVAL+IFS RG+LYE+ +++S+ T+ERY+K A P S EA QQE KL+ + +Q S R+++GE LG LN KEL++LE +L+ + ++RS + + ++ + +Q +E L N L+ ++ EG ++N Q S Sbjct: 23 IKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEY-ANNSVRGTIERYKKACSDAVNP-PSVTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLRAKIAEGARLNPDQQESS 200
BLAST of FC930756 vs. ExPASy Swiss-Prot
Match: AG_PANGI (Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.662e-35 Identity = 86/204 (42.16%), Postives = 126/204 (61.76%), Query Frame = 1 Query: 70 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNT-LQLNPSAEDCGYGLKQLTSGRYLLSRLGM 678 +KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS RG+LYE+ +++S+ T+ERY+K +P + S EA QQE KL+ ++Q++ RN++GE LG L ++L+ LE +L+ + +IRS + + + + +Q KE L N+ L+ ++ E + + L P + D Q GR + G+ Sbjct: 24 IKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEY-ANNSVKGTIERYKKACTDSPNTS-SVSEANAQFYQQEASKLRQEISSIQKNNRNMMGESLGSLTVRDLKGLETKLEKGISRIRSKKNELLFAEIEYMQKKEIDLHNNNQYLRAKIAENERAQQHMNLMPGSSDYELAPPQSFDGRNYIQLNGL 225
BLAST of FC930756 vs. ExPASy Swiss-Prot
Match: MAD21_ORYSJ (MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica GN=MADS21 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.077e-34 Identity = 76/172 (44.19%), Postives = 117/172 (68.02%), Query Frame = 1 Query: 70 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNY----GAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 573 +KRIENK +RQVTF KRRNGLLKKAYEL++LCDAE+ALI+FS+RG+LYEF + +S T+ERY+K + AP +V++ + QQE K++ + + LQ + R+L+GE +G + +KEL+SLE +L+ + +IRS + + + + +Q +E L N L+ ++ E Sbjct: 8 IKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEFSNVNSTRSTIERYKKASASTSGSAPVIDVNSHQYF----QQEAAKMRHQIQTLQNANRHLIGESIGNMTAKELKSLENRLEKGISRIRSKKHELLFSEIEYMQKREADLQNENMFLRAKVAE 175
BLAST of FC930756 vs. ExPASy Swiss-Prot
Match: AG_BRANA (Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.407e-34 Identity = 84/187 (44.92%), Postives = 124/187 (66.31%), Query Frame = 1 Query: 70 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSS---QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVN-TLQLNPSAED 618 +KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ S++S+ T+ERY+K A N + E+++ QQE KL+ + ++Q S R L+GE +G ++ KEL +LE +LD S+ +IRS + + + + +Q +E L N+ L+ ++ E + N ++ L P + Sbjct: 24 IKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-SNNSVKGTIERYKK----AISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLDRSVNRIRSKKNELLFAEIDYMQKREVDLHNDNQLLRAKIAENERNNPSMSLMPGGSN 205
BLAST of FC930756 vs. ExPASy Swiss-Prot
Match: AG_ARATH (Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 2.400e-34 Identity = 83/187 (44.39%), Postives = 124/187 (66.31%), Query Frame = 1 Query: 70 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSS---QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVN-TLQLNPSAED 618 +KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ S++S+ T+ERY+K A N + E+++ QQE KL+ + ++Q S R L+GE +G ++ KEL +LE +L+ S+ +IRS + + + + +Q +E L N+ L+ ++ E + N ++ L P + Sbjct: 24 IKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-SNNSVKGTIERYKK----AISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHNDNQILRAKIAENERNNPSISLMPGGSN 205 The following BLAST results are available for this feature:
BLAST of FC930756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930756 ID=FC930756; Name=FC930756; organism=Citrus clementina; type=EST; length=695bpback to top |