FC930758
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930758 vs. ExPASy Swiss-Prot
Match: UCRI_BOVIN (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Bos taurus GN=UQCRFS1 PE=1 SV=3) HSP 1 Score: 111.694 bits (278), Expect = 3.970e-24 Identity = 51/111 (45.95%), Postives = 74/111 (66.67%), Query Frame = 1 Query: 373 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANTVDLGSLRDPQQDAERVKNPEWLVVVGVCTH 705 +++ F+Y V A + ++ +FV SMSAS DVLAM+ +E+ LS I G + KWRGKP+F+R RT+++I V++ LRDPQ D ERVK PEW++++GVCTH Sbjct: 109 ARKGFSYLVTATTTVGVAYAAKNVVSQFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDPQHDLERVKKPEWVILIGVCTH 219
BLAST of FC930758 vs. ExPASy Swiss-Prot
Match: UCRI_PANTR (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Pan troglodytes GN=UQCRFS1 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.186e-24 Identity = 51/111 (45.95%), Postives = 74/111 (66.67%), Query Frame = 1 Query: 373 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANTVDLGSLRDPQQDAERVKNPEWLVVVGVCTH 705 +++ F+Y V A + + +FV SMSAS DVLA+A +E+ LS I G + KWRGKP+F+R RT+++I+ V+L LRDPQ D +RVK PEW++++GVCTH Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTH 219
BLAST of FC930758 vs. ExPASy Swiss-Prot
Match: UCRI_PANPA (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Pan paniscus GN=UQCRFS1 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.186e-24 Identity = 51/111 (45.95%), Postives = 74/111 (66.67%), Query Frame = 1 Query: 373 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANTVDLGSLRDPQQDAERVKNPEWLVVVGVCTH 705 +++ F+Y V A + + +FV SMSAS DVLA+A +E+ LS I G + KWRGKP+F+R RT+++I+ V+L LRDPQ D +RVK PEW++++GVCTH Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTH 219
BLAST of FC930758 vs. ExPASy Swiss-Prot
Match: UCRI_HUMAN (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Homo sapiens GN=UQCRFS1 PE=1 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 5.186e-24 Identity = 51/111 (45.95%), Postives = 74/111 (66.67%), Query Frame = 1 Query: 373 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANTVDLGSLRDPQQDAERVKNPEWLVVVGVCTH 705 +++ F+Y V A + + +FV SMSAS DVLA+A +E+ LS I G + KWRGKP+F+R RT+++I+ V+L LRDPQ D +RVK PEW++++GVCTH Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTH 219
BLAST of FC930758 vs. ExPASy Swiss-Prot
Match: UCRI_GORGO (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Gorilla gorilla gorilla GN=UQCRFS1 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.186e-24 Identity = 51/111 (45.95%), Postives = 74/111 (66.67%), Query Frame = 1 Query: 373 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANTVDLGSLRDPQQDAERVKNPEWLVVVGVCTH 705 +++ F+Y V A + + +FV SMSAS DVLA+A +E+ LS I G + KWRGKP+F+R RT+++I+ V+L LRDPQ D +RVK PEW++++GVCTH Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTH 219
BLAST of FC930758 vs. ExPASy Swiss-Prot
Match: UCRI_RAT (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Rattus norvegicus GN=Uqcrfs1 PE=1 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 6.773e-24 Identity = 51/111 (45.95%), Postives = 73/111 (65.77%), Query Frame = 1 Query: 373 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANTVDLGSLRDPQQDAERVKNPEWLVVVGVCTH 705 +++ F+Y V A + + +FV SMSAS DVLAM+ +E+ LS I G + KWRGKP+F+R RT+++I V++ LRDPQ D ERVK PEW++++GVCTH Sbjct: 109 ARKGFSYLVTATTTVGVAYAAKNAVSQFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDPQHDLERVKKPEWVILIGVCTH 219
BLAST of FC930758 vs. ExPASy Swiss-Prot
Match: UCRI_MOUSE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Mus musculus GN=Uqcrfs1 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.845e-24 Identity = 50/111 (45.05%), Postives = 74/111 (66.67%), Query Frame = 1 Query: 373 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANTVDLGSLRDPQQDAERVKNPEWLVVVGVCTH 705 +++ F+Y V A + ++ +FV SMSAS DVLAM+ +E+ LS I G + KWRGKP+F+R RT+++I V++ LRDPQ D +RVK PEW++++GVCTH Sbjct: 109 ARKGFSYLVTATTTVGVAYAAKNVVSQFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDPQHDLDRVKKPEWVILIGVCTH 219
BLAST of FC930758 vs. ExPASy Swiss-Prot
Match: UCRI_RHORU (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodospirillum rubrum GN=petA PE=1 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23 Identity = 58/123 (47.15%), Postives = 77/123 (62.60%), Query Frame = 1 Query: 337 EYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANTVDLGSLRDPQQDAERVKNPEWLVVVGVCTH 705 E H PG S R F++ G V A + L + F+ M+ + D LA+AS EVD+S+I G +TV WRGKPVF+R RT+++I +A VD SLRDPQ D RV+ +WLV+VGVCTH Sbjct: 3 EAEHTASTPGGESSRRD--FLIYGTTAVGAVGVALAVWPFIDFMNPAADTLALASTEVDVSAIAEGQAITVTWRGKPVFVRHRTQKEIVVARAVDPASLRDPQTDEARVQQAQWLVMVGVCTH 123
BLAST of FC930758 vs. ExPASy Swiss-Prot
Match: UCRI_RICBR (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia bellii (strain RML369-C) GN=petA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.945e-19 Identity = 53/126 (42.06%), Postives = 74/126 (58.73%), Query Frame = 1 Query: 334 DEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANTVDLGSLRDPQQDAERVK--NPEWLVVVGVCTH 705 D N + D SK + F++ V A + + S++ S DVLA++S+EVDLS+I G TVTVKW+GKPVFI RT + I A V + L DP++D +RVK + WLV +G+CTH Sbjct: 6 DTNNDNKVEFEDRSKTSRRDFMVLTASSVAAVGAACTLWPLINSLNPSADVLALSSIEVDLSNIAVGQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPEEDQDRVKAGHDNWLVTIGICTH 131
BLAST of FC930758 vs. ExPASy Swiss-Prot
Match: UCRI_RICTY (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia typhi GN=petA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.493e-18 Identity = 45/83 (54.22%), Postives = 59/83 (71.08%), Query Frame = 1 Query: 463 SMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANTVDLGSLRDPQQDAERVK--NPEWLVVVGVCTH 705 S++ S DVLA++S+EVDLSSI G TVTVKW+GKP+FI RT + I A V + L DP++D RVK + WLV +G+CTH Sbjct: 40 SLNPSTDVLALSSIEVDLSSIAIGQTVTVKWQGKPIFITNRTPDGIASARAVKMSELIDPEKDEVRVKAGHDNWLVTIGICTH 122 The following BLAST results are available for this feature:
BLAST of FC930758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930758 ID=FC930758; Name=FC930758; organism=Citrus clementina; type=EST; length=705bpback to top |