FC930762
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_HUMAN (Methylthioribose-1-phosphate isomerase OS=Homo sapiens GN=MRI1 PE=1 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.207e-44 Identity = 105/222 (47.30%), Postives = 142/222 (63.96%), Query Frame = 1 Query: 4 SLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAAT-ASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNS--KFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 +L++I Y RGSLQ+LDQ LP ++ Y + W AIR M VRG VE+ G AA A F+ DKL +LV++RPTAVN++ AA L ++ ++ A + +V + I E ML+ D+ N++IG GA L ++ S K +VLTHCNTG+LATAGYGTALGVIR+LHS G LE A+C+ETRP+NQG+RLTAFELV+++IP Sbjct: 2 TLEAIRYSRGSLQILDQLLLPKQSRYEAVGSVHQAWEAIRAMKVRGAPAIALVGCLSLAVELQAGAGGPGLAALVA-FVRDKLSFLVTARPTAVNMARAARDLADVAAREAEREGATEEAVRERVICCTEDMLEKDLRDNRSIGDLGARHLLERVAPSGGKVTVLTHCNTGALATAGYGTALGVIRSLHSLGRLEHAFCTETRPYNQGARLTAFELVYEQIP 222
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_BOVIN (Methylthioribose-1-phosphate isomerase OS=Bos taurus GN=MRI1 PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.675e-42 Identity = 103/222 (46.40%), Postives = 140/222 (63.06%), Query Frame = 1 Query: 4 SLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAAT-ASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQL--KNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 +L++I Y RGSLQ+LDQ LP ++ Y + W AIR M VRG VE+ G AA A F+ D L +LV++RPTAVN++ AA L ++ ++ A + +V + I AE ML D+ N++IG GA L + + K +VLTHCNTG+LATAGYGTALGVIR+LH+ G LE A+C+ETRP+NQG+RLTAFELV+++IP Sbjct: 2 TLEAIRYSRGSLQILDQLLLPQQSRYEAVGSVRQAWEAIRAMKVRGAPAIALVGCLSLAVELQAGAGGPGLAALVA-FVQDALSFLVTARPTAVNMARAARDLADLAAQEAEREGATEEAVRERVICWAEDMLDKDLRDNRSIGDLGAHHLLKRAAPQGGKVTVLTHCNTGALATAGYGTALGVIRSLHNLGRLEHAFCTETRPYNQGARLTAFELVYEQIP 222
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_SCHPO (Methylthioribose-1-phosphate isomerase OS=Schizosaccharomyces pombe GN=mri1 PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 8.313e-42 Identity = 100/220 (45.45%), Postives = 131/220 (59.55%), Query Frame = 1 Query: 4 SLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNS-KFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 SLQ+I Y L +LDQ LP E Y+ + + D ++ I++M VRG V + +L+ ADA ++ + E+L SRPTAVNL + A ++ I E + I+ AE ML D+ N IG+ G FL K+ K +VLTHCNTGSLAT+GYGTALG+IR+LH G LE AYC+ETRP+NQGSRLTAFELVHD+IP Sbjct: 2 SLQAIIYNEDKLLVLDQLLLPYERKYISVSNVEDAFAVIKKMQVRGAPAIAIVAALSVAVGLKHLSE----DADAKEYVINSFEHLKQSRPTAVNLFETAKFMQGI------ALQEGKNCRNKIIQEAERMLVKDLEDNHNIGTAGRKFLLQHYKDKDKLTVLTHCNTGSLATSGYGTALGIIRSLHESGNLEHAYCTETRPYNQGSRLTAFELVHDKIP 211
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_XENTR (Methylthioribose-1-phosphate isomerase OS=Xenopus tropicalis GN=mri1 PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.159e-41 Identity = 101/224 (45.09%), Postives = 136/224 (60.71%), Query Frame = 1 Query: 4 SLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLG---DKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATA-SEANSVFQAYIEAAEIMLKDDVATNKAIGSYGAS-FLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 SL+S+ Y RGSLQ+L+Q LP ++ Y + G AIR M VRG VE+ S T D SF+ + L +LV +RPTAVN+ AA +L ++K A A + + ++ I+ AE +LK DV N+ IG +GA L+ K +LTHCNTGSLATAGYGTALGV+R+LH G L +C+ETRP+NQGSRLTA+ELV+++IP Sbjct: 2 SLESVRYSRGSLQVLNQLLLPHKSEYEPVTGVQQGADAIRTMKVRGAPAIAIVGVLSLAVELT-----SRTCQDVPSFIAFVQESLCHLVDARPTAVNMKKAADELNAFLAKEAEKAGATTQGLAESVIQWAEALLKKDVEDNQMIGDFGAKHILETAGPTEKVCMLTHCNTGSLATAGYGTALGVVRSLHVLGRLSHVFCTETRPYNQGSRLTAYELVYEKIP 220
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_MOUSE (Methylthioribose-1-phosphate isomerase OS=Mus musculus GN=Mri1 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.568e-40 Identity = 101/222 (45.50%), Postives = 136/222 (61.26%), Query Frame = 1 Query: 4 SLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAAT-ASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQL--KNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 +L++I Y GSLQ+LDQ +LP Y + AIR M VRG VE+ G AA A F+ D+L LV++RPTAVN++ AA L ++ ++ A + +V + I AE ML+ D+ N++IG GA L Q + K +VLTHCNTG+LATAGYGTALGVIR+LH G LE +C+ETRP+NQG+RLTAFELV+++IP Sbjct: 2 TLEAIRYSPGSLQILDQLQLPEHCHYEALSSVQQASEAIRAMKVRGAPAIALVGCLSLAVELRAGAGGPGLAALVA-FVRDQLRLLVAARPTAVNMARAARDLGQVAAQEAEREGATEETVRERVIRFAEDMLEKDLKDNRSIGDLGARHLLEQTNPRGGKVTVLTHCNTGALATAGYGTALGVIRSLHEMGRLEHTFCTETRPYNQGARLTAFELVYEQIP 222
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_RAT (Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus GN=Mri1 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.674e-40 Identity = 101/221 (45.70%), Postives = 134/221 (60.63%), Query Frame = 1 Query: 7 LQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAAT-ASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQL--KNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 L++I Y GSLQ+LDQ +LP Y + AIR M VRG VE+ G AA A F+ D+L LV++RPTAVN++ AA L + ++ A + +V + I AE ML+ D+ N++IG GA L Q + K +VLTHCNTG+LATAGYGTALGVIR+LH G LE +C+ETRP+NQG+RLTAFELV+++IP Sbjct: 3 LEAIRYSPGSLQILDQLQLPEHCHYETLSSVQQAREAIRAMKVRGAPAIALVGCLSLAVELQAGAGGPGLAALVA-FVRDQLSLLVAARPTAVNMARAARDLTHMAAREAELEGATEETVRERVIRFAEDMLEKDLKDNRSIGDLGARHLLEQTNPRGGKVTVLTHCNTGALATAGYGTALGVIRSLHEMGRLEHTFCTETRPYNQGARLTAFELVYEKIP 222
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_XENLA (Methylthioribose-1-phosphate isomerase OS=Xenopus laevis GN=mri1 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.493e-40 Identity = 95/221 (42.99%), Postives = 135/221 (61.09%), Query Frame = 1 Query: 4 SLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAA-ATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGAS-FLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 SL+S+ Y RGSLQ+L+Q LP ++ Y + G AIR M VRG VE+ +F+ + L +LVS+RPTAVN+ AA +L +++ A + + + ++ ++ AE +LK DV N+ IG +GA L+ K +LTHCNTGSLATAGYGTALGV+R+LH+ G L +C+ETRP+NQGSRLTA+ELV+++IP Sbjct: 2 SLESVRYSRGSLQVLNQLLLPHKSEYEPVTGVQQGADAIRTMKVRGAPAIAIVGVLSLAVELTTKPCQD--VPSLITFVRESLHHLVSARPTAVNMKKAADELNAFLAEEADKPGATSQRLTESVVQWAESLLKKDVEDNQMIGDFGAKHILEKAGPTEKVCMLTHCNTGSLATAGYGTALGVVRSLHALGRLSHVFCTETRPYNQGSRLTAYELVYEKIP 220
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_THISH (Methylthioribose-1-phosphate isomerase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=mtnA PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.983e-35 Identity = 96/221 (43.44%), Postives = 132/221 (59.73%), Query Frame = 1 Query: 1 NSLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEA-AEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 ++++++ + SL+LLDQR+LP ET+YL+I D AIREMVVRG + L A + DA L LE L +SRPTAVNL A A++K +I + A A +EA A + +DD+A N+ +G GA+ L + +VLTHCNTGSLAT GYGTALGVIR+ + + +++ Y ETRP+ QG+RLTA+ELV D IP Sbjct: 9 DTVRAVLWDGTSLKLLDQRRLPRETVYLDIPDVGAAADAIREMVVRGAPAIGITAAYGVVLAARRLPADTPDWLDA---LTPDLERLAASRPTAVNLFWALARMKSVIGQVGAD-------LPARLEAEARRIHEDDLADNRRMGELGAA-----LMDPAEAVLTHCNTGSLATGGYGTALGVIRSAYGQQRIKKVYADETRPWLQGARLTAWELVQDGIP 214
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_ALCBS (Methylthioribose-1-phosphate isomerase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=mtnA PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 7.892e-32 Identity = 88/210 (41.90%), Postives = 120/210 (57.14%), Query Frame = 1 Query: 37 LQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVE--VFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 LQLLDQR LP ET++L+I DS AIR MVVRG +E + +A T +A + L D SRPTAVNL A +L+ A + ++ QA E AE + ++D+A N+A+G +GA L S +V THCNTG+LAT G+GTALG+IR+ + L + ETRP+ QGSRLT++EL++D IP Sbjct: 15 LQLLDQRCLPTETLWLDICDSQQAADAIRNMVVRGAPAIGITAAYGLALEAQIMGNDASWVTLQNAVATLAD-------SRPTAVNLFWALERLQRY-----AGDLQGKALAQALAEDAEAIHREDLAANQAMGEFGADLLP-----SGATVYTHCNTGALATGGHGTALGIIRSAWARNQLTGVFAGETRPWLQGSRLTSWELLNDGIP 207 HSP 2 Score: 23.8682 bits (50), Expect = 7.892e-32 Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 3 Query: 681 CCGCIDEDGRVSAVIVGA 734 C G + + G++ AVIVGA Sbjct: 215 CAGQLMQQGKIQAVIVGA 232
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_YEAST (Methylthioribose-1-phosphate isomerase OS=Saccharomyces cerevisiae GN=MRI1 PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.963e-31 Identity = 94/255 (36.86%), Postives = 137/255 (53.73%), Query Frame = 1 Query: 4 SLQSICYRRG-----SLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEV--FNLNAFSGTAA--------DAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNS----KFSVLTHCNTGSLATAGYGTALGVIRALHSEGV---------LERAYCS--------ETRPFNQGSRLTAFELVHDRIP 660 SL++I + R S+++LDQ LP T Y+ I DG+S I+ M VRG EV N S A + L +L++L+SSRPTAVNLS++ ++K I+ ++ + S++ E ++ +D+A N +G GA +L + L+ +F+VLT CNTGSLAT+GYGTALGVIR+L + + L+ C ETRP+NQGSRLTA+ELV+D+IP Sbjct: 2 SLEAIVFDRSEPENVSVKVLDQLLLPYTTKYVPIHTIDDGYSVIKSMQVRGAPAIAIVGSLSVLTEVQLIKHNPTSDVATLYSLVNWESTKTVLNKRLDFLLSSRPTAVNLSNSLVEIKNILKSSSDLKAFDGSLYNYVCE----LIDEDLANNMKMGDNGAKYLIDVLQKDGFKDEFAVLTICNTGSLATSGYGTALGVIRSLWKDSLAKTDKADSGLDNEKCPRMGHVFPLETRPYNQGSRLTAYELVYDKIP 252 The following BLAST results are available for this feature:
BLAST of FC930762 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930762 ID=FC930762; Name=FC930762; organism=Citrus clementina; type=EST; length=772bpback to top |