FC930762
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_XANOM (Methylthioribose-1-phosphate isomerase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=mtnA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.021e-23 Identity = 77/218 (35.32%), Postives = 117/218 (53.67%), Query Frame = 1 Query: 7 LQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYI-EAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRI 657 ++ + + +L+LLDQRKLP ++ S AI + VRG + ++ A G AA L L L ++RPTAVNL+ A +++ ++ A A ++A I A+ + +D+A N+ +G+ GA+ + VLTHCNTGSLATAG+GTALGVIRA ++ + + + ETRP+ QG+RLT +EL D I Sbjct: 15 IRPLLWTGDALELLDQRKLPFVVEHVRCDTSDAVAEAIHSLAVRGAPAIGIAAGWGVALAARDIAADDGNAA--LQKLEPALLRLNAARPTAVNLAWALMRMRRVLGAAGAD-------WRAVIAREAQAIADEDLAANRHMGALGAALIA-----PGSGVLTHCNTGSLATAGFGTALGVIRAGMAQQRIAKVFAGETRPWLQGARLTVWELQQDGI 218
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_DESVM (Methylthioribose-1-phosphate isomerase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=mtnA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.021e-23 Identity = 81/213 (38.03%), Postives = 111/213 (52.11%), Query Frame = 1 Query: 34 SLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASF----LGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 +L LLDQR LP R + D +A++ MVVRG + + AA+A L LE + +RPTAVNL A +++++ K A A A + EA I +DD+ N+A+G +GA+ + + +V+THCN G+LATAGYGTALGVIR G +ETRPF QG+RLTA+EL D IP Sbjct: 13 ALILLDQRLLPTRQEDFVCRTTEDIVTALQVMVVRGAPAIGVTAAWGCVLAAYE-------AAEAGDHWHPVLDGLLERIAKARPTAVNLRWAVDRMRKVW-KTAGHAPFATLISLWESEARRIH-RDDIEINRAMGRHGAALI-----DEGDTVMTHCNAGALATAGYGTALGVIRGAVDAGKKISVIANETRPFLQGARLTAYELHEDHIP 211
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_ANAVT (Methylthioribose-1-phosphate isomerase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=mtnA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.021e-23 Identity = 76/219 (34.70%), Postives = 118/219 (53.88%), Query Frame = 1 Query: 16 ICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLE----YLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 + ++ + L+DQ +LP E +EI S + AI+ M+VRG L A ++ FL KLE L ++RPTAVNL A +++ + + T ++ + + ++ A+ + +D+ T + IG G + L +K ++LTHCN G+LATAGYGTALGV+R+ EG LER + ETRP QG++LT +E V + IP Sbjct: 5 VIWQNNCVLLIDQTRLPNEYAVVEIHRSEEMARAIQTMIVRGAPAIGVAAAYGMY-----LGAREIETSERQEFL-QKLEKVAQLLRATRPTAVNLFWAISRMLKTAYETLGTVAQ---IKENLLQTAQAINAEDLQTCQVIGDNGLAILPKT--PTKLTLLTHCNAGALATAGYGTALGVVRSAWREGRLERLFADETRPRLQGAKLTTWECVQEGIP 212
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: EI2B1_METTH (Putative translation initiation factor eIF-2B subunit 1 OS=Methanobacterium thermoautotrophicum GN=MTH_1872 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.021e-23 Identity = 79/223 (35.43%), Postives = 114/223 (51.12%), Query Frame = 1 Query: 4 SLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEY----LVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 ++++I ++ G L L+DQRKLP Y RD D AI+ MVVRG + A G A A G+ +E + +SRPTAVNL A + + K+ + EA +++ +D+ TN+AIG +GA +++ +VLTHCN G+LA YGTALGVIRA +G C ETRP QG+RL+ +E+ + IP Sbjct: 2 NMKTIEWKDGELVLIDQRKLPDSLEYFRCRDYRDVIYAIKNMVVRG-------------APAIGVTAAFGVAM--AELAGEDVEVAAEEIKASRPTAVNLFWAVDR----VMKSESPLDEAITMYM-----------EDMETNRAIGRHGAGLIEDG-----DTVLTHCNAGALACVDYGTALGVIRAAWDDGKRLTVICDETRPVGQGARLSVWEMQQEGIP 189
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_XANCP (Methylthioribose-1-phosphate isomerase OS=Xanthomonas campestris pv. campestris GN=mtnA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.333e-23 Identity = 74/217 (34.10%), Postives = 115/217 (53.00%), Query Frame = 1 Query: 7 LQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRI 657 ++ + + +L+LLDQRKLP ++ S AI + VRG + + A SG+ +A L L L ++RPTAVNL+ A +++ +++ A + + A+ + +D+A N+ +G+ GA + VLTHCNTGSLATAG+GTALGVIRA ++ + + + ETRP+ QG+RLT +EL D I Sbjct: 15 IRPLLWTGDALELLDQRKLPFVVEHVRCDSSDAVAEAIHSLAVRGAPAIGIAAGWGVVLAAREIAADSGS--EALQKLEPALLRLNAARPTAVNLAWALMRMRRVLAAAGPDWRDVLA------REAQAIADEDLAANRHMGALGAGLIA-----PGSGVLTHCNTGSLATAGFGTALGVIRAGMAQQRISKVFAGETRPWLQGARLTVWELQQDGI 218
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_XANCB (Methylthioribose-1-phosphate isomerase OS=Xanthomonas campestris pv. campestris (strain B100) GN=mtnA PE=3 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.333e-23 Identity = 74/217 (34.10%), Postives = 115/217 (53.00%), Query Frame = 1 Query: 7 LQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRI 657 ++ + + +L+LLDQRKLP ++ S AI + VRG + + A SG+ +A L L L ++RPTAVNL+ A +++ +++ A + + A+ + +D+A N+ +G+ GA + VLTHCNTGSLATAG+GTALGVIRA ++ + + + ETRP+ QG+RLT +EL D I Sbjct: 15 IRPLLWTGDALELLDQRKLPFVVEHVRCDSSDAVAEAIHSLAVRGAPAIGIAAGWGVVLAAREIAADSGS--EALQKLEPALLRLNAARPTAVNLAWALMRMRRVLAAAGPDWRDVLA------REAQAIADEDLAANRHMGALGAGLIA-----PGSGVLTHCNTGSLATAGFGTALGVIRAGMAQQRISKVFAGETRPWLQGARLTVWELQQDGI 218
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_XANC8 (Methylthioribose-1-phosphate isomerase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=mtnA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.333e-23 Identity = 74/217 (34.10%), Postives = 115/217 (53.00%), Query Frame = 1 Query: 7 LQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRI 657 ++ + + +L+LLDQRKLP ++ S AI + VRG + + A SG+ +A L L L ++RPTAVNL+ A +++ +++ A + + A+ + +D+A N+ +G+ GA + VLTHCNTGSLATAG+GTALGVIRA ++ + + + ETRP+ QG+RLT +EL D I Sbjct: 15 IRPLLWTGDALELLDQRKLPFVVEHVRCDSSDAVAEAIHSLAVRGAPAIGIAAGWGVVLAAREIAADSGS--EALQKLEPALLRLNAARPTAVNLAWALMRMRRVLAAAGPDWRDVLA------REAQAIADEDLAANRHMGALGAGLIA-----PGSGVLTHCNTGSLATAGFGTALGVIRAGMAQQRISKVFAGETRPWLQGARLTVWELQQDGI 218
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_AQUAE (Methylthioribose-1-phosphate isomerase OS=Aquifex aeolicus GN=mtnA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.333e-23 Identity = 79/222 (35.59%), Postives = 109/222 (49.10%), Query Frame = 1 Query: 22 YRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKL---------EYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 ++ L LLDQRKLP + ++LE++ + AI+EM VRG G A LG K+ E L ++RPTA NL A ++ + + + EA + K+D NK +G G+ + K VLTHCNTG+LATAG+GTALGVIR+ H G + ETRP+ QG+RLTA+ELV + IP Sbjct: 138 WKGDKLLLLDQRKLPHQEVWLELKTYEEVAKAIKEMAVRGAPAI-------------------GCTAAYGFVLGVKVQKEDPEKVYETLKNTRPTAYNLFWALDRMMKALKEGKDIEEEAKEIE-----------KEDYEANKRMGEIGSEIVPLNAK-----VLTHCNTGALATAGWGTALGVIRSAHYGGKNIFVWVDETRPYLQGARLTAWELVKESIP 324
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_THET2 (Methylthioribose-1-phosphate isomerase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=mtnA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.274e-23 Identity = 79/214 (36.92%), Postives = 105/214 (49.07%), Query Frame = 1 Query: 31 GSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEY----LVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 G LLDQR+LP E +Y+ +R + + AIR+MVVRG ++A G A G+ LE L +SRPTAVNL A +++ A + EA +++ E T AI +GA L Q VLTHCNTG LAT GYGTALG I + G + + ETRP+ QG+RLTA+EL +P Sbjct: 14 GVFWLLDQRRLPQEEVYVPVRTAREMAQAIRDMVVRG-------------APAIGVSAAFGMVL--AHLAGEDLEEADRRLRASRPTAVNLFHALDRMRPFWGDLAGSLLEARRIWREVEE-----------TEAAISRHGAQILWGQ-------VLTHCNTGPLATGGYGTALGAIVEAYRLGRVRHVWVDETRPYLQGARLTAYELQKAGVP 194
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_CHLSY (Methylthioribose-1-phosphate isomerase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=mtnA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.274e-23 Identity = 82/222 (36.94%), Postives = 115/222 (51.80%), Query Frame = 1 Query: 7 LQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEY---LVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEA-AEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 L+++ + ++ L+DQRKLP + D A AIR M VRG L A A ++ L + ++ L S RPTAVNL+ A +++ + +A A ASE + + A AE + +D+A AIG +GAS + + VLTHCN G LATAGYGTAL IR ++G + ETRPF QG+RLTA+EL+ IP Sbjct: 3 LRTVWWENDAVCLIDQRKLPHTMEVVRCTDLAAVAYAIRSMQVRGAPAIGCTAAYGMA-----LVAQQSVALTPSALLTELVQAKATLDSQRPTAVNLAWATSRM---LRRAEAVASEGVEAIKHALHAEAEAIFAEDLAMCHAIGEHGASLIP-----PRGHVLTHCNAGGLATAGYGTALAPIRTAFAQGRPVHVFVDETRPFLQGARLTAWELLQAGIP 211 The following BLAST results are available for this feature:
BLAST of FC930762 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930762 ID=FC930762; Name=FC930762; organism=Citrus clementina; type=EST; length=772bpback to top |