FC930762

Overview
NameFC930762
Unique NameFC930762
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length772
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_YERPY (Methylthioribose-1-phosphate isomerase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=mtnA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.835e-16
Identity = 67/210 (31.90%), Postives = 98/210 (46.67%), Query Frame = 1 
Query:   31 GSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660
            G L +LDQ+ LP    +L     A     I+ + VRG             +    L A       + + L   L  L  SRPTAVNL +  A++++ + +     + A    +   E  E+         + I  +GA+ ++        ++LTHCNTG LATAG GTA+GV+   H +G L + +  ETRP  QG RLTA+EL    IP
Sbjct:   19 GQLWILDQQALPQRQEWLLADTVASLIEHIQALRVRGAPLIG--------LSASLLLALLAERGLSQALLEQALIALRESRPTAVNLMNNLARMQQALLQPNWVTAMAAEALRLVDEDRELC--------ERIAQHGAALVK-----PGSNLLTHCNTGGLATAGIGTAIGVLLRAHQQGNLRQVWVDETRPLLQGGRLTAWELGELGIP 207
[Close]
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_YERPS (Methylthioribose-1-phosphate isomerase OS=Yersinia pseudotuberculosis GN=mtnA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.835e-16
Identity = 67/210 (31.90%), Postives = 98/210 (46.67%), Query Frame = 1 
Query:   31 GSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660
            G L +LDQ+ LP    +L     A     I+ + VRG             +    L A       + + L   L  L  SRPTAVNL +  A++++ + +     + A    +   E  E+         + I  +GA+ ++        ++LTHCNTG LATAG GTA+GV+   H +G L + +  ETRP  QG RLTA+EL    IP
Sbjct:   19 GQLWILDQQALPQRQEWLLADTVASLIEHIQALRVRGAPLIG--------LSASLLLALLAERGLSQALLEQALIALRESRPTAVNLMNNLARMQQALLQPNWVTAMAAEALRLVDEDRELC--------ERIAQHGAALVK-----PGSNLLTHCNTGGLATAGIGTAIGVLLRAHQQGNLRQVWVDETRPLLQGGRLTAWELGELGIP 207
[Close]
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_YERPP (Methylthioribose-1-phosphate isomerase OS=Yersinia pestis (strain Pestoides F) GN=mtnA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.835e-16
Identity = 67/210 (31.90%), Postives = 98/210 (46.67%), Query Frame = 1 
Query:   31 GSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660
            G L +LDQ+ LP    +L     A     I+ + VRG             +    L A       + + L   L  L  SRPTAVNL +  A++++ + +     + A    +   E  E+         + I  +GA+ ++        ++LTHCNTG LATAG GTA+GV+   H +G L + +  ETRP  QG RLTA+EL    IP
Sbjct:   19 GQLWILDQQALPQRQEWLLADTVASLIEHIQALRVRGAPLIG--------LSASLLLALLAERGLSQALLEQALIALRESRPTAVNLMNNLARMQQALLQPNWVTAMAAEALRLVDEDRELC--------ERIAQHGAALVK-----PGSNLLTHCNTGGLATAGIGTAIGVLLRAHQQGNLRQVWVDETRPLLQGGRLTAWELGELGIP 207
[Close]
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_YERPG (Methylthioribose-1-phosphate isomerase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=mtnA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.835e-16
Identity = 67/210 (31.90%), Postives = 98/210 (46.67%), Query Frame = 1 
Query:   31 GSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660
            G L +LDQ+ LP    +L     A     I+ + VRG             +    L A       + + L   L  L  SRPTAVNL +  A++++ + +     + A    +   E  E+         + I  +GA+ ++        ++LTHCNTG LATAG GTA+GV+   H +G L + +  ETRP  QG RLTA+EL    IP
Sbjct:   19 GQLWILDQQALPQRQEWLLADTVASLIEHIQALRVRGAPLIG--------LSASLLLALLAERGLSQALLEQALIALRESRPTAVNLMNNLARMQQALLQPNWVTAMAAEALRLVDEDRELC--------ERIAQHGAALVK-----PGSNLLTHCNTGGLATAGIGTAIGVLLRAHQQGNLRQVWVDETRPLLQGGRLTAWELGELGIP 207
[Close]
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_YERPB (Methylthioribose-1-phosphate isomerase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=mtnA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.835e-16
Identity = 67/210 (31.90%), Postives = 98/210 (46.67%), Query Frame = 1 
Query:   31 GSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660
            G L +LDQ+ LP    +L     A     I+ + VRG             +    L A       + + L   L  L  SRPTAVNL +  A++++ + +     + A    +   E  E+         + I  +GA+ ++        ++LTHCNTG LATAG GTA+GV+   H +G L + +  ETRP  QG RLTA+EL    IP
Sbjct:   19 GQLWILDQQALPQRQEWLLADTVASLIEHIQALRVRGAPLIG--------LSASLLLALLAERGLSQALLEQALIALRESRPTAVNLMNNLARMQQALLQPNWVTAMAAEALRLVDEDRELC--------ERIAQHGAALVK-----PGSNLLTHCNTGGLATAGIGTAIGVLLRAHQQGNLRQVWVDETRPLLQGGRLTAWELGELGIP 207
[Close]
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_YERP3 (Methylthioribose-1-phosphate isomerase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=mtnA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.835e-16
Identity = 67/210 (31.90%), Postives = 98/210 (46.67%), Query Frame = 1 
Query:   31 GSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660
            G L +LDQ+ LP    +L     A     I+ + VRG             +    L A       + + L   L  L  SRPTAVNL +  A++++ + +     + A    +   E  E+         + I  +GA+ ++        ++LTHCNTG LATAG GTA+GV+   H +G L + +  ETRP  QG RLTA+EL    IP
Sbjct:   19 GQLWILDQQALPQRQEWLLADTVASLIEHIQALRVRGAPLIG--------LSASLLLALLAERGLSQALLEQALIALRESRPTAVNLMNNLARMQQALLQPNWVTAMAAEALRLVDEDRELC--------ERIAQHGAALVK-----PGSNLLTHCNTGGLATAGIGTAIGVLLRAHQQGNLRQVWVDETRPLLQGGRLTAWELGELGIP 207
[Close]
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_KLEP3 (Methylthioribose-1-phosphate isomerase OS=Klebsiella pneumoniae (strain 342) GN=mtnA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.835e-16
Identity = 71/216 (32.87%), Postives = 102/216 (47.22%), Query Frame = 1 
Query:   13 SICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660
            S+      L +LDQ+ LP E  +L   + A     I  + VRG               +  L A  G   DA   L   LE L ++RPTAVNL +   ++K+ +++            QA    A  ++++D      I   G++ ++   +     +LTHCNTG LATAG GTALGVI   H +G +   +  ETRP  QG RLTA+EL    +P
Sbjct:    8 SLRVSENQLFILDQQALPQEKRWLAADNVALLVDHIHALRVRGAPLIGLSASL-----LLALLAQRGLNRDA---LQQALETLRAARPTAVNLMNNLDRMKQALAR--------EDYPQALEAEALRLVEEDKQLCDRIAEAGSALVKPGSR-----LLTHCNTGGLATAGVGTALGVIALAHRQGKVANVWVDETRPLLQGGRLTAWELGELGVP 202
[Close]
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA2_BACHK (Methylthioribose-1-phosphate isomerase 2 OS=Bacillus thuringiensis subsp. konkukian GN=mtnA2 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.835e-16
Identity = 70/216 (32.41%), Postives = 103/216 (47.69%), Query Frame = 1 
Query:   10 QSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSG--TAADAASF---LGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFEL 642
            +S+ ++  ++ +L+Q KLP  T Y  +    + W +I  + VRG             V  F L   S   T      F         YL +SRPTAVNL  A  +++E I +   T  EA  + +   E A  + ++D A  ++IG +  +  ++       ++LT CN GS+ATA YGTAL        +GV   AY  ETRP  QG RLT +EL
Sbjct:    9 RSVSWKGDAIAVLNQTKLPHSTEYKTLTTIEEVWKSIVMLEVRGAPAIGI-------VAAFGLALASKKYTTLHIEEFQKKFNRDCNYLGTSRPTAVNLFWAIDRMRESIQEIT-TIKEAQKILE---EEALRIQQEDEAVCRSIGEHALTCFKDG-----DNILTICNAGSIATARYGTALAPFYIGKEKGVRLHAYACETRPVLQGGRLTTWEL 208
[Close]
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA2_BACCR (Methylthioribose-1-phosphate isomerase 2 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=mtnA2 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.835e-16
Identity = 66/211 (31.28%), Postives = 97/211 (45.97%), Query Frame = 1 
Query:   10 QSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFEL 642
            +S+ ++  ++ +L+Q KLP  T Y  +    + W +I  + VRG             +     N       +          YL +SRPTAVNL  A  +++E I +   T  EA  + +   EA  I  +D+      IG Y  +  ++       ++LT CN GS+ATA YGTAL        +GV   AY  ETRP  QG RLT +EL
Sbjct:    9 RSVSWKGDAIAVLNQTKLPHSTEYKTLTTIEEVWKSIIMLEVRGAPAIGIVAAFGLALAAKKYNTLH--IEEFQKKFNRDCNYLGTSRPTAVNLFWAIDRMRESI-REITTIKEAQKILEE--EALRIQQEDEEVCRN-IGEYALTCFKDG-----DNILTICNAGSIATARYGTALAPFYIGKEKGVRLHAYACETRPVLQGGRLTTWEL 208
[Close]
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA2_BACAN (Methylthioribose-1-phosphate isomerase 2 OS=Bacillus anthracis GN=mtnA2 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.835e-16
Identity = 70/216 (32.41%), Postives = 103/216 (47.69%), Query Frame = 1 
Query:   10 QSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSG--TAADAASF---LGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFEL 642
            +S+ ++  ++ +L+Q KLP  T Y  +    + W +I  + VRG             V  F L   S   T      F         YL +SRPTAVNL  A  +++E I +   T  EA  + +   E A  + ++D A  ++IG +  +  ++       ++LT CN GS+ATA YGTAL        +GV   AY  ETRP  QG RLT +EL
Sbjct:    9 RSVSWKGDAIAVLNQTKLPHSTEYKTLTTIEEVWKSIVMLEVRGAPAIGI-------VAAFGLALASKKYTTLHIEEFQKKFNRDCNYLGTSRPTAVNLFWAIDRMRESIQEIT-TIKEAQKILE---EEALRIQQEDEAVCRSIGEHALTCFKDG-----DNILTICNAGSIATARYGTALAPFYIGKEKGVRLHAYACETRPVLQGGRLTTWEL 208
The following BLAST results are available for this feature:
BLAST of FC930762 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
MTNA_YERPY7.835e-1631.90Methylthioribose-1-phosphate isomerase OS=Yersinia... [more]
MTNA_YERPS7.835e-1631.90Methylthioribose-1-phosphate isomerase OS=Yersinia... [more]
MTNA_YERPP7.835e-1631.90Methylthioribose-1-phosphate isomerase OS=Yersinia... [more]
MTNA_YERPG7.835e-1631.90Methylthioribose-1-phosphate isomerase OS=Yersinia... [more]
MTNA_YERPB7.835e-1631.90Methylthioribose-1-phosphate isomerase OS=Yersinia... [more]
MTNA_YERP37.835e-1631.90Methylthioribose-1-phosphate isomerase OS=Yersinia... [more]
MTNA_KLEP37.835e-1632.87Methylthioribose-1-phosphate isomerase OS=Klebsiel... [more]
MTNA2_BACHK7.835e-1632.41Methylthioribose-1-phosphate isomerase 2 OS=Bacill... [more]
MTNA2_BACCR7.835e-1631.28Methylthioribose-1-phosphate isomerase 2 OS=Bacill... [more]
MTNA2_BACAN7.835e-1632.41Methylthioribose-1-phosphate isomerase 2 OS=Bacill... [more]

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Properties
Property NameValue
Genbank descriptionC34108G06EF PostHarvP1 Citrus clementina cDNA clone C34108G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930762 ID=FC930762; Name=FC930762; organism=Citrus clementina; type=EST; length=772bp
AACTCTCTTCAGTCCATTTGCTACAGGCGTGGCTCCCTTCAGCTTCTCGA
CCAGAGAAAGCTTCCTCTGGAAACTATTTATTTGGAAATTCGCGATTCTG
CCGATGGATGGTCTGCAATACGGGAAATGGTGGTGCGGGGGGCGCCTGCC
ATTGCTATAGCAGCGGCACTTTCCCTGGCAGTGGAGGTGTTTAATTTGAA
TGCATTTAGTGGGACTGCTGCCGATGCAGCTTCATTTCTTGGCGATAAGT
TGGAATATCTTGTCTCTAGTCGACCGACTGCAGTGAATCTTTCAGATGCT
GCCGCAAAACTCAAAGAAATCATATCAAAGGCTGCCGCTACTGCTTCAGA
AGCCAATAGTGTATTTCAGGCCTACATAGAAGCTGCTGAAATTATGCTCA
AAGATGATGTTGCTACAAACAAAGCTATTGGTTCTTATGGGGCAAGTTTT
CTTCAGAACCAGCTCAAAAATTCTAAATTCTCTGTTCTTACTCATTGCAA
CACTGGCAGTCTTGCAACAGCTGGATATGGTACCGCCCTTGGTGTGATCC
GTGCACTTCATTCTGAGGGAGTGTTAGAAAGAGCTTATTGCTCTGAAACA
CGTCCATTCAACCAAGGATCTAGACTCACTGCTTTTGAGTTGGTACATGA
TCGCATACCAGCTACTCTTATAGCCGACTCTGCTGCGGCTGCATTGATGA
AGATGGTCGTGTGAGTGCTGTCATTGTCGGAGCAATCGAGTGGCTGCAAA
TGTGACCTGCTAACAGATGGAA
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