FC930764
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930764 vs. ExPASy Swiss-Prot
Match: PABP1_RAT (Polyadenylate-binding protein 1 OS=Rattus norvegicus GN=Pabpc1 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.113e-29 Identity = 68/175 (38.86%), Postives = 108/175 (61.71%), Query Frame = 2 Query: 110 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGE 628 A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+ +N + GKP+R+ + +D G N+FI NLD +D K LYDTFSAFG I++ + D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182 HSP 2 Score: 96.2857 bits (238), Expect = 1.712e-19 Identity = 62/194 (31.96%), Postives = 99/194 (51.03%), Query Frame = 2 Query: 92 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 622 A + Y+ N + +E L ELF + GP ++V V D + +G+GFV F EDA A+ +N +L GK I V +A QD+ + G NL++ NLD +D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A +K+ + Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEER 374 HSP 3 Score: 90.8929 bits (224), Expect = 7.193e-18 Identity = 56/172 (32.56%), Postives = 100/172 (58.14%), Query Frame = 2 Query: 119 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 613 ++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N + L + + V + S+ ++ ++GA N++I N D+D++ L + F FG ++ K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALS-VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
BLAST of FC930764 vs. ExPASy Swiss-Prot
Match: PABP1_HUMAN (Polyadenylate-binding protein 1 OS=Homo sapiens GN=PABPC1 PE=1 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 3.113e-29 Identity = 68/175 (38.86%), Postives = 108/175 (61.71%), Query Frame = 2 Query: 110 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGE 628 A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+ +N + GKP+R+ + +D G N+FI NLD +D K LYDTFSAFG I++ + D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182 HSP 2 Score: 95.1301 bits (235), Expect = 3.814e-19 Identity = 61/194 (31.44%), Postives = 99/194 (51.03%), Query Frame = 2 Query: 92 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 622 A + Y+ N + +E L +LF + GP ++V V D + +G+GFV F EDA A+ +N +L GK I V +A QD+ + G NL++ NLD +D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A +K+ + Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEER 374 HSP 3 Score: 92.4337 bits (228), Expect = 2.472e-18 Identity = 57/172 (33.14%), Postives = 100/172 (58.14%), Query Frame = 2 Query: 119 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 613 ++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N + L + + V + S+ ++ ++GA N++I N D+D++ L D F FG ++ K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS-VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
BLAST of FC930764 vs. ExPASy Swiss-Prot
Match: PABP1_BOVIN (Polyadenylate-binding protein 1 OS=Bos taurus GN=PABPC1 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.113e-29 Identity = 68/175 (38.86%), Postives = 108/175 (61.71%), Query Frame = 2 Query: 110 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGE 628 A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+ +N + GKP+R+ + +D G N+FI NLD +D K LYDTFSAFG I++ + D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182 HSP 2 Score: 95.1301 bits (235), Expect = 3.814e-19 Identity = 61/194 (31.44%), Postives = 99/194 (51.03%), Query Frame = 2 Query: 92 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 622 A + Y+ N + +E L +LF + GP ++V V D + +G+GFV F EDA A+ +N +L GK I V +A QD+ + G NL++ NLD +D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A +K+ + Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEER 374 HSP 3 Score: 92.4337 bits (228), Expect = 2.472e-18 Identity = 57/172 (33.14%), Postives = 100/172 (58.14%), Query Frame = 2 Query: 119 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 613 ++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N + L + + V + S+ ++ ++GA N++I N D+D++ L D F FG ++ K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS-VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
BLAST of FC930764 vs. ExPASy Swiss-Prot
Match: PABP1_MOUSE (Polyadenylate-binding protein 1 OS=Mus musculus GN=Pabpc1 PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.066e-29 Identity = 68/175 (38.86%), Postives = 108/175 (61.71%), Query Frame = 2 Query: 110 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGE 628 A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+ +N + GKP+R+ + +D G N+FI NLD +D K LYDTFSAFG I++ + D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSQKEREAE 182 HSP 2 Score: 96.2857 bits (238), Expect = 1.712e-19 Identity = 62/194 (31.96%), Postives = 99/194 (51.03%), Query Frame = 2 Query: 92 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 622 A + Y+ N + +E L ELF + GP ++V V D + +G+GFV F EDA A+ +N +L GK I V +A QD+ + G NL++ NLD +D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A +K+ + Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEER 374 HSP 3 Score: 92.4337 bits (228), Expect = 2.472e-18 Identity = 57/172 (33.14%), Postives = 100/172 (58.14%), Query Frame = 2 Query: 119 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 613 ++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N + L + + V + SQ ++ ++GA N++I N D+D++ L + F FG ++ K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSQKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALS-VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
BLAST of FC930764 vs. ExPASy Swiss-Prot
Match: PABP_LODEL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Lodderomyces elongisporus GN=PAB1 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.935e-29 Identity = 75/198 (37.88%), Postives = 114/198 (57.58%), Query Frame = 2 Query: 41 TTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 628 T+ P A G+ S A+ YVG L+P V E L+E+F G V ++ V +D V+ GY +V + ED + AI+ LN + G+P R+ + +D + G N+FI NL P +D K L+DTFSAFG I+ + K+ D D G S+ FGF+ Y++ EA+ AAIE++NG L +R++ V + KKD + + Sbjct: 44 TSSSVPADSAEEQGESSGIAENSASLYVGELNPSVNEATLFEIFSPIGQVASIRVCRDAVSKKSLGYAYVNYHKLEDGEKAIEELNYTPVEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKIL-SVKVATD-DLGQSKCFGFVHYETEEAAQAAIESVNGMLLNDREVYVGKHVSKKDRESK 239 HSP 2 Score: 96.6709 bits (239), Expect = 1.311e-19 Identity = 64/209 (30.62%), Postives = 107/209 (51.20%), Query Frame = 2 Query: 77 LGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 622 +G+H +++++++ YV N+D TE+ ELF G + ++Y+ KD +G+GFV F E A A++ LN ++ G+ I V +A + +K S G NLF+ NLD +D + L + F FG I T+ K+M D D G S+GFGF+ + + E + AI MN + + + + V+ A +KD + Sbjct: 227 VGKHVSKKDRESKLEEMKANYTNIYVKNIDLAYTEKEFEELFAPFGKITSIYLEKD-AEGKSKGFGFVNFEEHEAAAKAVEELNDKEINGQKIYVGRAQKKRERTEELKKQYEAVRLEKLSKYQGVNLFVKNLDEQIDSEKLEEEFKPFGTI-TSSKVMVD-DAGKSKGFGFVCFSTPEEATKAITEMNQRMVNGKPLYVALAQRKDVR 432 HSP 3 Score: 81.2629 bits (199), Expect = 5.699e-15 Identity = 55/187 (29.41%), Postives = 102/187 (54.55%), Query Frame = 2 Query: 89 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 628 SA R+ D ++ NL P + + L + F G +++V V D + + +GFV + +EE A AI+ +N + L + + V+K ++ K ++ AN +++ N+D EK + F+ FG I T+ + +D + G S+GFGF++++ EA+ A+E +N + + ++I V A KK + E Sbjct: 148 SARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSVKVATDDLGQ-SKCFGFVHYETEEAAQAAIESVNGMLLNDREVYVGKHVSKKDRESKLEEMKANYTNIYVKNIDLAYTEKEFEELFAPFGKI-TSIYLEKDAE-GKSKGFGFVNFEEHEAAAKAVEELNDKEINGQKIYVGRAQKKRERTE 331
BLAST of FC930764 vs. ExPASy Swiss-Prot
Match: PABPB_XENLA (Polyadenylate-binding protein 1-B OS=Xenopus laevis GN=pabpc1-B PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.935e-29 Identity = 67/175 (38.29%), Postives = 108/175 (61.71%), Query Frame = 2 Query: 110 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGE 628 A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+ +N + GKP+R+ + +D G N+FI NLD +D K LYDTFSAFG I++ + D S+G+GF+ +++ EA++ AI+ MNG L +R++ V + +K+ + E Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVC---DENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAE 182 HSP 2 Score: 91.6633 bits (226), Expect = 4.217e-18 Identity = 67/216 (31.02%), Postives = 105/216 (48.61%), Query Frame = 2 Query: 92 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANIRVPRRV 688 A + Y+ N + +E L E F Q G ++V V D +G+GFV F EDA A+ +N L GK I V +A QD+ + G NL++ NLD +D++ L F+ FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A +K+ + + H T A++RVP V Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDD-HGKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFTPFGSI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEER-QAHLTNQYMQRMASVRVPNPV 395 HSP 3 Score: 87.8113 bits (216), Expect = 6.089e-17 Identity = 56/172 (32.56%), Postives = 97/172 (56.40%), Query Frame = 2 Query: 119 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 613 ++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI +N + L + + V + S+ ++ ++GA N++I N D+D++ L + F +G ++ K+M D D G SRGFGF+S++ E + A++ MNG+ L + I V A KK Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEWFGQYGAALS-VKVMTD-DHGKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRAQKK 269
BLAST of FC930764 vs. ExPASy Swiss-Prot
Match: PABP1_PONAB (Polyadenylate-binding protein 1 OS=Pongo abelii GN=PABPC1 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.057e-29 Identity = 67/175 (38.29%), Postives = 107/175 (61.14%), Query Frame = 2 Query: 110 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGE 628 A+ YVG+L P TE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+ +N + GKP+R+ + +D G N+FI NLD +D K LYDTFSAFG I++ + D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E Sbjct: 11 ASLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182 HSP 2 Score: 95.1301 bits (235), Expect = 3.814e-19 Identity = 61/194 (31.44%), Postives = 99/194 (51.03%), Query Frame = 2 Query: 92 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 622 A + Y+ N + +E L +LF + GP ++V V D + +G+GFV F EDA A+ +N +L GK I V +A QD+ + G NL++ NLD +D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A +K+ + Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEER 374 HSP 3 Score: 92.4337 bits (228), Expect = 2.472e-18 Identity = 57/172 (33.14%), Postives = 100/172 (58.14%), Query Frame = 2 Query: 119 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 613 ++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N + L + + V + S+ ++ ++GA N++I N D+D++ L D F FG ++ K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS-VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
BLAST of FC930764 vs. ExPASy Swiss-Prot
Match: PABP_PHANO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Phaeosphaeria nodorum GN=PAB1 PE=3 SV=3) HSP 1 Score: 126.716 bits (317), Expect = 1.183e-28 Identity = 69/169 (40.83%), Postives = 106/169 (62.72%), Query Frame = 2 Query: 110 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 613 A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + S ED + A++ LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I+ + K+ +D + GNS+G+GF+ Y++ EA++ AI+ +NG L +++ V + K Sbjct: 48 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALEELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNIL-SCKVAQD-ELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPK 214 HSP 2 Score: 78.1814 bits (191), Expect = 4.825e-14 Identity = 56/177 (31.64%), Postives = 94/177 (53.11%), Query Frame = 2 Query: 119 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 628 ++ NLD + + L + F G +++ V +D + N +GYGFV + + E A+ AIK +N + L K + V K + K ++ AN +++ N+D DV ++ + F G I T+ I RD D G SRGFGF++Y EA+ A++ +N +++ V A KK + E Sbjct: 139 FIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGN-SKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKERMSKFEEMKANFTNIYVKNIDLDVTDEDFRELFEKHGDI-TSASIARD-DQGKSRGFGFVNYIRHEAAAVAVDHLNDIEFKGQKLYVGRAQKKHEREE 312 HSP 3 Score: 72.7886 bits (177), Expect = 2.027e-12 Identity = 58/236 (24.58%), Postives = 98/236 (41.53%), Query Frame = 2 Query: 119 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPD---------------------------------------------------TGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 622 YV N+D VT+E ELF + G + + + +D +G+GFV + E A A+ LN I+ G+ + V +A + +K+S G NL+I NL+ DVD++ L D F+ FG I + I+RD + G S+GFGF+ + + + + A+ MN + + + + V+ A +KD + Sbjct: 232 YVKNIDLDVTDEDFRELFEKHGDITSASIARDD-QGKSRGFGFVNYIRHEAAAVAVDHLNDIEFKGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVDDEKLRDMFTPFGTITSAKVILRDEEKKDEEEKEVKEEKKEDEKKEDEEAKEGSSSEQNGEDTKAGDKVTIKGEKKILGKSKGFGFVCFSNPDEATKAVTEMNQKMIEGKPLYVALAQRKDVR 466
BLAST of FC930764 vs. ExPASy Swiss-Prot
Match: PABP_NEOFI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pab1 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.545e-28 Identity = 69/176 (39.20%), Postives = 109/176 (61.93%), Query Frame = 2 Query: 89 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 613 SA + A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + D + A++ LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I+ + K+ +D + GNS+G+GF+ Y++ EA++ AI+ +NG L ++++ V + K Sbjct: 45 SANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNIL-SCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISK 218 HSP 2 Score: 83.5741 bits (205), Expect = 1.148e-15 Identity = 53/177 (29.94%), Postives = 98/177 (55.37%), Query Frame = 2 Query: 119 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 628 ++ NLD + + L + F G +++ V +D N +GYGFV + + E A+ AIK +N + L K + ++K + K ++ AN ++I N+D +V ++ F FG I T+ + RD + G SRGFGF+++ + +++ AA++ MN + + +++ V A KK + E Sbjct: 143 FIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEI-TSATLSRDQE-GKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREE 316 HSP 3 Score: 76.6406 bits (187), Expect = 1.404e-13 Identity = 56/229 (24.45%), Postives = 101/229 (44.10%), Query Frame = 2 Query: 119 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDT--------------------------------------------GNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 622 Y+ N+D +VT+E ++F + G + + + +D+ +G+GFV F + + A A+ +N ++ G+ + V +A + +K S G NL++ NL DVD++ L + FS FG I T+ K+MRD T G S+GFGF+ + S + + A+ MN + + + + V+ A +KD + Sbjct: 236 YIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQ-EGKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRELFSPFGTI-TSAKVMRDTVTAGETSESEKEKESNKENEKEGEEKTEEKPKESEEEAKKTEKKILGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVR 462
BLAST of FC930764 vs. ExPASy Swiss-Prot
Match: PABP_MAGGR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Magnaporthe grisea GN=PAB1 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.545e-28 Identity = 78/211 (36.97%), Postives = 122/211 (57.82%), Query Frame = 2 Query: 35 GMTTRIAPGVGANLLGQH---------SAERNQDATA--YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKDTKGE 628 G T + VGA+ G+ SA + A+A YVG LDP VTE +L+ELF Q G V ++ V +D VT GY +V + + D + A++ LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I+ + K+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD + + Sbjct: 25 GEKTTVNTNVGASFTGEEIDTAGPTPSSAAPHPQASASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNIL-SCKVAQD-ENGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSK 233 HSP 2 Score: 90.1225 bits (222), Expect = 1.227e-17 Identity = 65/231 (28.14%), Postives = 105/231 (45.45%), Query Frame = 2 Query: 119 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDT----------------------------------------------GNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 622 YV N++P+VT++ LF + G V + + +D+ T +G+GFV F S EDA A++ LN + +G+ + V +A Q+K S G NL+I NLD +VD++ L FS FG I T+ K+MRD T G S+GFGF+ + + + + A+ MN + + N+ + V+ A +KD + Sbjct: 245 YVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFVNFTSHEDASKAVQELNEKEFHGQNLYVGRAQKKHEREEELRKSYEAARQEKASKYQGVNLYIKNLDDEVDDEKLRQLFSEFGPI-TSAKVMRDSITEPGEEGESKEGEESEKNKENKPEEKEGDDSKPEEKEGEDSKSKSKLGKSKGFGFVCFANPDDATKAVAEMNQRMVNNKPLYVALAQRKDVR 474 HSP 3 Score: 83.9593 bits (206), Expect = 8.793e-16 Identity = 53/177 (29.94%), Postives = 94/177 (53.11%), Query Frame = 2 Query: 119 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 628 ++ NLD + + L + F G +++ V +D N +GYGFV + ++E A AIK +N + L K + V K + K ++ AN +++ N++P+V + F +G VT+ + RD +TG SRGFGF+++ S E + A++ +N + + + V A KK + E Sbjct: 152 FIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGN-SKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFDEMKANFTNIYVKNINPEVTDDEFRTLFEKYGD-VTSSSLARDQETGKSRGFGFVNFTSHEDASKAVQELNEKEFHGQNLYVGRAQKKHEREE 326 The following BLAST results are available for this feature:
BLAST of FC930764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 192
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930764 ID=FC930764; Name=FC930764; organism=Citrus clementina; type=EST; length=704bpback to top |