FC930767

Overview
NameFC930767
Unique NameFC930767
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11318 contig Ccv1_Contig11318:467..1171. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: ACON_CORJK (Aconitate hydratase OS=Corynebacterium jeikeium (strain K411) GN=acn PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.697e-49
Identity = 89/178 (50.00%), Postives = 126/178 (70.79%), Query Frame = 3
Query:  126 FYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTTACYTP 659
            +++L A+  P +EKLPYS+++L E+ +RN D   + +E IE I +W+ SA    EI F PARV++QDFTGV  +VDLA +RDA+  LG D++ +NPL P ++VIDHSV ++     +A++ N+E E+QRN ER+ FL+WG+ AF N  VVPPG+GIVHQVN+EYL R VF+      P
Sbjct:   23 YFALDAV--PGMEKLPYSLKVLGENLLRNEDGKNITREHIEAIANWDPSAEPNFEIQFTPARVIMQDFTGVACIVDLATIRDAVVALGGDADDVNPLNPAEMVIDHSVIIEAFGDSDALEKNVEIEYQRNDERYKFLRWGTGAFENFRVVPPGTGIVHQVNIEYLARSVFDNNGLAYP 198          

HSP 2 Score: 31.5722 bits (70), Expect = 1.697e-49
Identity = 12/19 (63.16%), Postives = 15/19 (78.95%), Query Frame = 2
Query:  632 FQYHGMLYPDSVVGTDSHT 688
            F  +G+ YPD+ VGTDSHT
Sbjct:  190 FDNNGLAYPDTCVGTDSHT 208          
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: ACON_STAES (Aconitate hydratase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=acnA PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 2.213e-49
Identity = 99/177 (55.93%), Postives = 125/177 (70.62%), Query Frame = 3
Query:  111 GEFGKFYSLPALNDP---RIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVV 632
            G+   +Y L  L +    +I KLPYSIR+LLES +R  D+F +  + I+ +  + N A  + E+PFKP+RV+LQDFTGVPAVVDLA +R AMN +G D NKINP VPVDLVIDHSVQVD   +  A++ NM+ EF+RN ER+ FL W + AF N   VPP +GIVHQVNLEYL  VV
Sbjct:   17 GQSYTYYDLQTLEEKGLAKISKLPYSIRVLLESVLRQEDDFVITDDHIKALSKFGN-AGNEGEVPFKPSRVILQDFTGVPAVVDLASLRKAMNDVGGDINKINPEVPVDLVIDHSVQVDSYANPEALERNMKLEFERNYERYQFLNWATKAFDNYNAVPPATGIVHQVNLEYLANVV 192          

HSP 2 Score: 26.5646 bits (57), Expect = 2.213e-49
Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 2
Query:  653 YPDSVVGTDSHTP*LMG 703
            +PD++VGTDSHT  + G
Sbjct:  204 FPDTLVGTDSHTTMING 220          
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: ACON_STAEQ (Aconitate hydratase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=acnA PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 2.213e-49
Identity = 99/177 (55.93%), Postives = 125/177 (70.62%), Query Frame = 3
Query:  111 GEFGKFYSLPALNDP---RIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVV 632
            G+   +Y L  L +    +I KLPYSIR+LLES +R  D+F +  + I+ +  + N A  + E+PFKP+RV+LQDFTGVPAVVDLA +R AMN +G D NKINP VPVDLVIDHSVQVD   +  A++ NM+ EF+RN ER+ FL W + AF N   VPP +GIVHQVNLEYL  VV
Sbjct:   17 GQSYTYYDLQTLEEKGLAKISKLPYSIRVLLESVLRQEDDFVITDDHIKALSKFGN-AGNEGEVPFKPSRVILQDFTGVPAVVDLASLRKAMNDVGGDINKINPEVPVDLVIDHSVQVDSYANPEALERNMKLEFERNYERYQFLNWATKAFDNYNAVPPATGIVHQVNLEYLANVV 192          

HSP 2 Score: 26.5646 bits (57), Expect = 2.213e-49
Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 2
Query:  653 YPDSVVGTDSHTP*LMG 703
            +PD++VGTDSHT  + G
Sbjct:  204 FPDTLVGTDSHTTMING 220          
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: ACON_CORDI (Aconitate hydratase OS=Corynebacterium diphtheriae GN=acn PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 8.320e-49
Identity = 90/178 (50.56%), Postives = 124/178 (69.66%), Query Frame = 3
Query:  126 FYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTTACYTP 659
            +++L A+    +EKLPYS+++L E+ +R  D   +  + I  I +W+ SA   +EI F PARVL+QDFTGVP VVDLA MR+A+  LG D +K+NPL P ++VIDHSV ++   S  A+  N+E E++RN+ER+ FL+WGS AF N  VVPPG+GIVHQVN+E L RVVF+      P
Sbjct:   23 YFALSAVKG--MEKLPYSLKVLGENLLRTEDGANITADHINAIANWDPSAEPSIEIQFTPARVLMQDFTGVPCVVDLATMREAVKTLGGDPDKVNPLNPAEMVIDHSVIIEAFGSTLALAKNVEIEYERNEERYQFLRWGSKAFSNFRVVPPGTGIVHQVNIENLARVVFDNNGLAYP 198          

HSP 2 Score: 31.187 bits (69), Expect = 8.320e-49
Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 2
Query:  632 FQYHGMLYPDSVVGTDSHT 688
            F  +G+ YPD+ +GTDSHT
Sbjct:  190 FDNNGLAYPDTCIGTDSHT 208          
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: ACON1_PSEAE (Aconitate hydratase 1 OS=Pseudomonas aeruginosa GN=acnA PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.085e-48
Identity = 100/179 (55.87%), Postives = 123/179 (68.72%), Query Frame = 3
Query:  111 GEFGKFYSLP----ALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVVF 635
            G+   +YSLP     L D  + KLP S+++LLE+ +R  D   V  +D++ +  W        EI ++PARVL+QDFTGVPAVVDLA MR AM K G D  KINPL PVDLVIDHSV VD   SE+A + N+E E QRN ER+AFL+WG +AF N  VVPPG+GI HQVNLEYLGR V+
Sbjct:   17 GKTYHYYSLPEAARTLGD--LGKLPMSLKVLLENLLRWEDGSTVTGDDLKALAGWLRERRSDREIQYRPARVLMQDFTGVPAVVDLAAMRAAMAKAGGDPQKINPLSPVDLVIDHSVMVDKFASESAFEQNVEIEMQRNGERYAFLRWGQNAFDNFSVVPPGTGICHQVNLEYLGRTVW 193          

HSP 2 Score: 26.5646 bits (57), Expect = 1.085e-48
Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 2
Query:  653 YPDSVVGTDSHTP*LMG 703
            +PD++VGTDSHT  + G
Sbjct:  204 FPDTLVGTDSHTTMING 220          
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: ACON_RICCN (Aconitate hydratase OS=Rickettsia conorii GN=acnA PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.085e-48
Identity = 90/170 (52.94%), Postives = 119/170 (70.00%), Query Frame = 3
Query:  150 DPRIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTTACYTP 659
            D  ++KLPYS+R+L E+ +R+  +    K+ +    +W  +     EI F PARVL+QDFTGVPA+VDLA MRDAM K+G D  KINPL+PVDLVIDHSV VD   ++++   N++ E +RN ER+AFLKWG  AF+N  VVPPG+GI HQVNLEYL +VV++      P
Sbjct:   33 DLPLKKLPYSLRVLFENVLRSNGS----KQSLLVFKEWLKTKKSDAEIDFMPARVLMQDFTGVPAIVDLAAMRDAMKKIGGDPLKINPLIPVDLVIDHSVSVDSYAAKDSFNKNVQMEMKRNIERYAFLKWGQQAFNNFKVVPPGTGICHQVNLEYLAKVVWHKDGTLYP 198          

HSP 2 Score: 32.3426 bits (72), Expect = 1.085e-48
Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = 2
Query:  644 GMLYPDSVVGTDSHT 688
            G LYPDS+VGTDSHT
Sbjct:  194 GTLYPDSLVGTDSHT 208          
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: ACON_STRMU (Aconitate hydratase OS=Streptococcus mutans GN=acn PE=3 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 3.131e-48
Identity = 89/163 (54.60%), Postives = 117/163 (71.78%), Query Frame = 3
Query:  150 DPRIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFN 638
            D  ++ LPY+I+ILLES +R  D+  V K +IE +  + + AP Q E+PFKP+RV+LQDFTGVP VVDLA MRDA+ + G   + INP +PVDLVIDHSVQVD   +++A  AN++ EF+RN ER+ FLKW    F N   VPP +GI+HQVNLE+L  V+ N
Sbjct:   28 DIELDSLPYTIKILLESLLRKHDDICVTKNNIETLFHYNSKAP-QGEVPFKPSRVILQDFTGVPVVVDLASMRDAVVENGGSPDLINPEIPVDLVIDHSVQVDFFGNQDAFDANIDLEFERNNERYEFLKWAEKTFENYRAVPPATGIIHQVNLEFLSDVIIN 189          

HSP 2 Score: 31.187 bits (69), Expect = 3.131e-48
Identity = 13/20 (65.00%), Postives = 15/20 (75.00%), Query Frame = 2
Query:  644 GMLYPDSVVGTDSHTP*LMG 703
            G LYPDS+ GTDSHT  + G
Sbjct:  192 GFLYPDSMFGTDSHTTMING 211          
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: ACON1_ECOLI (Aconitate hydratase 1 OS=Escherichia coli (strain K12) GN=acnA PE=1 SV=3)

HSP 1 Score: 183.341 bits (464), Expect = 1.177e-47
Identity = 94/175 (53.71%), Postives = 122/175 (69.71%), Query Frame = 3
Query:  126 FYSLP----ALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFN 638
            +YSLP    +L D  I +LP S+++LLE+ +R  D   V +EDI  +  W  +A    EI ++PARVL+QDFTGVPAVVDLA MR+A+ +LG D+ K+NPL PVDLVIDHSV VD    + A + N+  E +RN ER+ FLKWG  AF    VVPPG+GI HQVNLEYLG+ V++
Sbjct:   22 YYSLPLAAKSLGD--ITRLPKSLKVLLENLLRWQDGNSVTEEDIHALAGWLKNAHADREIAYRPARVLMQDFTGVPAVVDLAAMREAVKRLGGDTAKVNPLSPVDLVIDHSVTVDRFGDDEAFEENVRLEMERNHERYVFLKWGKQAFSRFSVVPPGTGICHQVNLEYLGKAVWS 194          

HSP 2 Score: 28.1054 bits (61), Expect = 1.177e-47
Identity = 11/17 (64.71%), Postives = 14/17 (82.35%), Query Frame = 2
Query:  653 YPDSVVGTDSHTP*LMG 703
            YPD++VGTDSHT  + G
Sbjct:  204 YPDTLVGTDSHTTMING 220          
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: ACON_RICBR (Aconitate hydratase OS=Rickettsia bellii (strain RML369-C) GN=acnA PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.177e-47
Identity = 90/170 (52.94%), Postives = 116/170 (68.24%), Query Frame = 3
Query:  150 DPRIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTTACYTP 659
            D  ++KLPYS+R+L E+ +R        K+++    +W  +     EI F PARVL+QDFTGVPA+VDLA MRDAM K+G D  KINPL+PVDLVIDHSV VD   S ++   N+  E +RN ER+ FLKWG  AF+N  VVPPG+GI HQVNLEYL +VV+++     P
Sbjct:   33 DLPLKKLPYSLRVLFENVLRTGS-----KQNLMVFKEWLKNKKSDAEIDFMPARVLMQDFTGVPAIVDLAAMRDAMKKIGGDPLKINPLIPVDLVIDHSVSVDSYASGSSFDKNVAMEMRRNIERYQFLKWGQQAFNNFKVVPPGTGICHQVNLEYLAKVVWHSNGVAYP 197          

HSP 2 Score: 31.5722 bits (70), Expect = 1.177e-47
Identity = 12/16 (75.00%), Postives = 15/16 (93.75%), Query Frame = 2
Query:  641 HGMLYPDSVVGTDSHT 688
            +G+ YPDS+VGTDSHT
Sbjct:  192 NGVAYPDSLVGTDSHT 207          
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: ACON_RICFE (Aconitate hydratase OS=Rickettsia felis GN=acnA PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.177e-47
Identity = 87/160 (54.37%), Postives = 117/160 (73.12%), Query Frame = 3
Query:  159 IEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFN 638
            ++KLPYS+R+L E+ +R+  +    K+++    +W  +     EI F PARVL+QDFTGVPA+VDLA MRDAM K+G D  KINPL+PVDLVIDHSV VD   ++++   N++ E +RN ER+ FLKWG  AF+N  VVPPG+GI HQVNLEYL +VV++
Sbjct:   36 LKKLPYSLRVLFENVLRSNGS----KQNLLVFKEWLKTKESDAEIDFMPARVLMQDFTGVPAIVDLAAMRDAMKKIGGDPLKINPLIPVDLVIDHSVSVDSYAAKDSFDKNVQMEMKRNIERYQFLKWGQQAFNNFKVVPPGTGICHQVNLEYLAKVVWH 191          

HSP 2 Score: 31.5722 bits (70), Expect = 1.177e-47
Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 2
Query:  644 GMLYPDSVVGTDSHT 688
            G+ YPDS+VGTDSHT
Sbjct:  194 GLAYPDSLVGTDSHT 208          
The following BLAST results are available for this feature:
BLAST of FC930767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
ACON_CORJK1.697e-4950.00Aconitate hydratase OS=Corynebacterium jeikeium (s... [more]
ACON_STAES2.213e-4955.93Aconitate hydratase OS=Staphylococcus epidermidis ... [more]
ACON_STAEQ2.213e-4955.93Aconitate hydratase OS=Staphylococcus epidermidis ... [more]
ACON_CORDI8.320e-4950.56Aconitate hydratase OS=Corynebacterium diphtheriae... [more]
ACON1_PSEAE1.085e-4855.87Aconitate hydratase 1 OS=Pseudomonas aeruginosa GN... [more]
ACON_RICCN1.085e-4852.94Aconitate hydratase OS=Rickettsia conorii GN=acnA ... [more]
ACON_STRMU3.131e-4854.60Aconitate hydratase OS=Streptococcus mutans GN=acn... [more]
ACON1_ECOLI1.177e-4753.71Aconitate hydratase 1 OS=Escherichia coli (strain ... [more]
ACON_RICBR1.177e-4752.94Aconitate hydratase OS=Rickettsia bellii (strain R... [more]
ACON_RICFE1.177e-4754.38Aconitate hydratase OS=Rickettsia felis GN=acnA PE... [more]

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Properties
Property NameValue
Genbank descriptionC34108G11EF PostHarvP1 Citrus clementina cDNA clone C34108G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930767 ID=FC930767; Name=FC930767; organism=Citrus clementina; type=EST; length=704bp
AGATCAGAACCGTTGCTCCTGCCATCGAACGGCTCGAACGCGCCTTTGCT
ACTATGGCTGCTGAACATCCATTCAAGGAGATCTTGACCGCTCTTCCAAA
GCCAGGAGGTGGCGAGTTTGGAAAGTTCTATAGCCTTCCTGCACTCAATG
ATCCAAGAATTGAGAAGCTGCCATACTCTATCAGAATCCTGCTTGAATCT
GCTATTCGTAATTGTGACAACTTTCAAGTTAAGAAGGAAGATATCGAGAA
AATTATTGACTGGGAAAATTCTGCACCAAAGCAAGTTGAAATTCCCTTCA
AGCCTGCTCGTGTATTGTTGCAGGATTTTACTGGAGTACCAGCCGTGGTT
GACCTTGCCTGCATGCGTGATGCTATGAACAAGCTTGGCAGTGATTCCAA
CAAGATCAATCCTCTTGTTCCTGTAGATCTTGTCATTGATCATTCGGTTC
AGGTTGATGTAACAAGATCGGAAAATGCAGTTAAGGCAAATATGGAATTT
GAATTTCAGAGGAACAAGGAGAGATTCGCTTTCCTCAAATGGGGATCTAG
TGCTTTCCATAACATGCTTGTTGTTCCTCCTGGTTCTGGTATTGTGCATC
AGGTCAATCTTGAATATCTGGGACGGGTTGTTTTCAATACCACGGCATGC
TATACCCCGACAGTGTGGTTGGTACTGATTCTCATACACCATGATTGATG
GGTT
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