FC930775
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930775 vs. ExPASy Swiss-Prot
Match: AGL3_ARATH (Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana GN=AGL3 PE=1 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 5.632e-14 Identity = 37/38 (97.37%), Postives = 38/38 (100.00%), Query Frame = 1 Query: 37 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV 150 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAE+ Sbjct: 6 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEI 43
BLAST of FC930775 vs. ExPASy Swiss-Prot
Match: MADS6_ORYSJ (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.607e-14 Identity = 37/38 (97.37%), Postives = 38/38 (100.00%), Query Frame = 1 Query: 37 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV 150 VELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEV Sbjct: 6 VELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEV 43
BLAST of FC930775 vs. ExPASy Swiss-Prot
Match: MAD17_ORYSJ (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica GN=MADS17 PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 9.607e-14 Identity = 37/38 (97.37%), Postives = 38/38 (100.00%), Query Frame = 1 Query: 37 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV 150 VELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEV Sbjct: 6 VELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEV 43
BLAST of FC930775 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSJ (MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica GN=MADS5 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.639e-13 Identity = 37/38 (97.37%), Postives = 38/38 (100.00%), Query Frame = 1 Query: 37 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV 150 VELKRIENKI+RQVTFAKRRNGLLKKAYELSVLCDAEV Sbjct: 6 VELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEV 43
BLAST of FC930775 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSI (MADS-box transcription factor 5 OS=Oryza sativa subsp. indica GN=MADS5 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.639e-13 Identity = 37/38 (97.37%), Postives = 38/38 (100.00%), Query Frame = 1 Query: 37 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV 150 VELKRIENKI+RQVTFAKRRNGLLKKAYELSVLCDAEV Sbjct: 6 VELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEV 43
BLAST of FC930775 vs. ExPASy Swiss-Prot
Match: AGL6_ARATH (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6 PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 1.639e-13 Identity = 36/38 (94.74%), Postives = 38/38 (100.00%), Query Frame = 1 Query: 37 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV 150 VE+KRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEV Sbjct: 6 VEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEV 43
BLAST of FC930775 vs. ExPASy Swiss-Prot
Match: AGL9_SOLLC (Agamous-like MADS-box protein AGL9 homolog OS=Solanum lycopersicum GN=TDR5 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.140e-13 Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 1 Query: 37 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV 150 VELKRIE KINRQVTFAKRRNGLLKKAYELSVLCDAEV Sbjct: 6 VELKRIEGKINRQVTFAKRRNGLLKKAYELSVLCDAEV 43
BLAST of FC930775 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSJ (MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica GN=MADS1 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.651e-13 Identity = 36/38 (94.74%), Postives = 38/38 (100.00%), Query Frame = 1 Query: 37 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV 150 VELKRIENKI+RQVTFAKRRNGLLKKAYELS+LCDAEV Sbjct: 6 VELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEV 43
BLAST of FC930775 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSI (MADS-box transcription factor 1 OS=Oryza sativa subsp. indica GN=MADS1 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 3.651e-13 Identity = 36/38 (94.74%), Postives = 38/38 (100.00%), Query Frame = 1 Query: 37 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV 150 VELKRIENKI+RQVTFAKRRNGLLKKAYELS+LCDAEV Sbjct: 6 VELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEV 43
BLAST of FC930775 vs. ExPASy Swiss-Prot
Match: MAD15_ORYSJ (MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica GN=MADS15 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 1.387e-12 Identity = 34/38 (89.47%), Postives = 38/38 (100.00%), Query Frame = 1 Query: 37 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV 150 V+LKRIENKINRQVTF+KRRNGLLKKA+E+SVLCDAEV Sbjct: 6 VQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEV 43 The following BLAST results are available for this feature:
BLAST of FC930775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930775 ID=FC930775; Name=FC930775; organism=Citrus clementina; type=EST; length=151bpback to top |