FC930775
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930775 vs. ExPASy Swiss-Prot
Match: AGL8_SOLLC (Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.272e-12 Identity = 33/38 (86.84%), Postives = 38/38 (100.00%), Query Frame = 1 Query: 37 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV 150 V+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEV Sbjct: 6 VQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEV 43
BLAST of FC930775 vs. ExPASy Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.272e-12 Identity = 33/38 (86.84%), Postives = 38/38 (100.00%), Query Frame = 1 Query: 37 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV 150 V+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEV Sbjct: 6 VQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEV 43
BLAST of FC930775 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.272e-12 Identity = 33/38 (86.84%), Postives = 38/38 (100.00%), Query Frame = 1 Query: 37 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV 150 V+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEV Sbjct: 6 VQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEV 43
BLAST of FC930775 vs. ExPASy Swiss-Prot
Match: AGL8_ARATH (Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.272e-12 Identity = 33/38 (86.84%), Postives = 38/38 (100.00%), Query Frame = 1 Query: 37 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV 150 V+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEV Sbjct: 6 VQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEV 43
BLAST of FC930775 vs. ExPASy Swiss-Prot
Match: AGL5_ARATH (Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.272e-12 Identity = 33/38 (86.84%), Postives = 35/38 (92.11%), Query Frame = 1 Query: 37 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV 150 +E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEV Sbjct: 21 IEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV 58
BLAST of FC930775 vs. ExPASy Swiss-Prot
Match: AGL1_ARATH (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.272e-12 Identity = 33/38 (86.84%), Postives = 35/38 (92.11%), Query Frame = 1 Query: 37 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV 150 +E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEV Sbjct: 21 IEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV 58
BLAST of FC930775 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSJ (MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica GN=MADS18 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.885e-12 Identity = 32/38 (84.21%), Postives = 38/38 (100.00%), Query Frame = 1 Query: 37 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV 150 V+L+RIENKINRQVTF+KRRNGLLKKA+E+SVLCDA+V Sbjct: 6 VQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADV 43
BLAST of FC930775 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSI (MADS-box transcription factor 18 OS=Oryza sativa subsp. indica GN=MADS18 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 6.885e-12 Identity = 32/38 (84.21%), Postives = 38/38 (100.00%), Query Frame = 1 Query: 37 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV 150 V+L+RIENKINRQVTF+KRRNGLLKKA+E+SVLCDA+V Sbjct: 6 VQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADV 43
BLAST of FC930775 vs. ExPASy Swiss-Prot
Match: CAL_ARATH (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL PE=1 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 6.885e-12 Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = 1 Query: 37 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV 150 VELKRIENKINRQVTF+KRR GLLKKA E+SVLCDAEV Sbjct: 6 VELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEV 43
BLAST of FC930775 vs. ExPASy Swiss-Prot
Match: AGL9_ARADE (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.992e-12 Identity = 35/38 (92.11%), Postives = 35/38 (92.11%), Query Frame = 1 Query: 37 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV 150 VELK IENKINRQVTFAKRR LLKKAYELSVLCDAEV Sbjct: 6 VELKMIENKINRQVTFAKRRKRLLKKAYELSVLCDAEV 43 The following BLAST results are available for this feature:
BLAST of FC930775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930775 ID=FC930775; Name=FC930775; organism=Citrus clementina; type=EST; length=151bpback to top |