FC930775

Overview
NameFC930775
Unique NameFC930775
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length151
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15273 contig Ccv1_Contig15273:29..179. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC930775 vs. ExPASy Swiss-Prot
Match: AGL19_ARATH (Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana GN=AGL19 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.942e-11
Identity = 31/37 (83.78%), Postives = 35/37 (94.59%), Query Frame = 1 
Query:   40 ELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV 150
            E+KRIEN  +RQVTF+KRRNGLLKKA+ELSVLCDAEV
Sbjct:    7 EMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEV 43
[Close]
BLAST of FC930775 vs. ExPASy Swiss-Prot
Match: AGL14_ARATH (Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana GN=AGL14 PE=2 SV=2)

HSP 1 Score: 65.4698 bits (158), Expect = 9.942e-11
Identity = 31/37 (83.78%), Postives = 35/37 (94.59%), Query Frame = 1 
Query:   40 ELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV 150
            E+KRIEN  +RQVTF+KRRNGLLKKA+ELSVLCDAEV
Sbjct:    7 EMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEV 43
The following BLAST results are available for this feature:
BLAST of FC930775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
AGL19_ARATH9.942e-1183.78Agamous-like MADS-box protein AGL19 OS=Arabidopsis... [more]
AGL14_ARATH9.942e-1183.78Agamous-like MADS-box protein AGL14 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionC34108H08EF PostHarvP1 Citrus clementina cDNA clone C34108H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930775 ID=FC930775; Name=FC930775; organism=Citrus clementina; type=EST; length=151bp
GGAAGAAGAAAGGAGAAGAAAATGGGAAGGGGTAGGGTTGAGTTGAAGAG
GATAGAGAACAAGATCAACAGGCAAGTGACCTTTGCAAAGAGAAGAAATG
GCCTATTGAAGAAAGCTTATGAGCTTTCCGTTCTTTGTGATGCTGAGGTT
G
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