FC930778

Overview
NameFC930778
Unique NameFC930778
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15214 contig Ccv1_Contig15214:1..736. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA2_HUMAN (Nascent polypeptide-associated complex subunit alpha-2 OS=Homo sapiens GN=NACA2 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.134e-35
Identity = 79/136 (58.09%), Postives = 102/136 (75.00%), Query Frame = 1
Query:  289 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMVQ--DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690
            AM KLG+  + GV+RVT+ KSKNILFVI+K DV+KSP SD YIVFGEAKI+DLS Q Q  AAE+F+V     GN+    ++  + +  ++EEVDETGVE KD++LVM+QA V R++AV+AL     DIV+AIMELT
Sbjct:   79 AMSKLGLLQVTGVTRVTIWKSKNILFVITKLDVYKSPASDAYIVFGEAKIQDLSQQAQLAAAEKFRVQGEAVGNIQENTQTPTVQEESEEEEVDETGVEVKDVKLVMSQANVSRAKAVRALKNNSNDIVNAIMELT 214          
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_ASPCL (Nascent polypeptide-associated complex subunit alpha OS=Aspergillus clavatus GN=egd2 PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.535e-33
Identity = 78/149 (52.35%), Postives = 102/149 (68.46%), Query Frame = 1
Query:  289 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVA-----------SKPESSAMVQ----DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690
            A+ KLG+K +PG++RVT+++ KNILFVI++PDV++SPTS+T+I+FGEAKIEDL+SQ Q  AA+Q        G  A             PE+ A  +    D EEVDETG+E KDIELVM QA V R +AVKAL   D DIV++IM L+
Sbjct:   55 AIGKLGLKHVPGITRVTLRRPKNILFVINQPDVYRSPTSNTWIIFGEAKIEDLNSQAQASAAQQLAAAEAAAGEHAGHDHDHDHGKGKAPETEAKKEEEEDDGEEVDETGLEAKDIELVMAQANVSRKKAVKALRENDNDIVNSIMALS 203          
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_NEOFI (Nascent polypeptide-associated complex subunit alpha OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=egd2 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.901e-32
Identity = 77/149 (51.68%), Postives = 102/149 (68.46%), Query Frame = 1
Query:  289 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVA-----------SKPESSAMVQ----DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690
            A+ KLG+K +PG++RVT+++ KNILFVI++PDV++SP+S+T+I+FGEAKIEDL+SQ Q  AA+Q        G  A             PE+ A  +    D EEVDETG+E KDIELVM QA V R +AVKAL   D DIV++IM L+
Sbjct:   55 AIGKLGLKHVPGITRVTLRRPKNILFVINQPDVYRSPSSNTWIIFGEAKIEDLNSQAQASAAQQLAAAEAAAGEHAGHDHDHDHGKGKAPETEAKKEEEEDDGEEVDETGLEAKDIELVMAQANVSRKKAVKALRENDNDIVNSIMALS 203          
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_ASPFU (Nascent polypeptide-associated complex subunit alpha OS=Aspergillus fumigatus GN=egd2 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.901e-32
Identity = 77/149 (51.68%), Postives = 102/149 (68.46%), Query Frame = 1
Query:  289 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVA-----------SKPESSAMVQ----DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690
            A+ KLG+K +PG++RVT+++ KNILFVI++PDV++SP+S+T+I+FGEAKIEDL+SQ Q  AA+Q        G  A             PE+ A  +    D EEVDETG+E KDIELVM QA V R +AVKAL   D DIV++IM L+
Sbjct:   55 AIGKLGLKHVPGITRVTLRRPKNILFVINQPDVYRSPSSNTWIIFGEAKIEDLNSQAQASAAQQLAAAEAAAGEHAGHDHDHDHGKGKAPETEAKKEEEEDDGEEVDETGLEAKDIELVMAQANVSRKKAVKALRENDNDIVNSIMALS 203          
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_EMENI (Nascent polypeptide-associated complex subunit alpha OS=Emericella nidulans GN=egd2 PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.236e-32
Identity = 75/148 (50.68%), Postives = 102/148 (68.92%), Query Frame = 1
Query:  289 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPP----------PNTGNVASKPESSAMVQ----DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690
            A+ KLG+K +PG++RVT+++ KNILFVI++PDV++SP+S+T+I+FGEAKIEDL+SQ Q  AA+Q                +       PE+ A  +    D EEVDETG+EPKDI+LVM QA V R +AVKAL   D DIV++IM L+
Sbjct:   55 AIGKLGLKHVPGITRVTLRRPKNILFVINQPDVYRSPSSNTWIIFGEAKIEDLNSQAQASAAQQLAAAEAAGEHAGHDHDHDKGKGKAPETEAKKEEEEDDGEEVDETGLEPKDIDLVMAQANVSRKKAVKALRENDNDIVNSIMALS 202          
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_CAEBR (Nascent polypeptide-associated complex subunit alpha OS=Caenorhabditis briggsae GN=CBG05114 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.225e-32
Identity = 74/131 (56.49%), Postives = 92/131 (70.23%), Query Frame = 1
Query:  298 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMVQDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690
            KLG+K + GVSRV ++KSKNILFVI+KPDVFKSP SDTYI+FGEAKIEDL+   Q  A E  K P      + +  E      +D E D TG+E KDIELV++QA   R++A++AL  AD DIV+AIM LT
Sbjct:   70 KLGLKQVTGVSRVCIRKSKNILFVINKPDVFKSPGSDTYIIFGEAKIEDLTQHAQMSAIENMK-PTREAPQLKTVEEDD---NEDVEEDSTGIEEKDIELVISQANTTRNKAIRALKDADNDIVNAIMSLT 196          
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_COCIM (Nascent polypeptide-associated complex subunit alpha OS=Coccidioides immitis GN=EGD2 PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.102e-31
Identity = 75/149 (50.34%), Postives = 103/149 (69.13%), Query Frame = 1
Query:  289 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGN------------VASKPESSAMVQDDE---EVDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690
            A+ KLG+K +PG++RVT+++ KNILFVI++PDV++SP+S+T+I+FGEAKIEDL+SQ Q  AA+Q        GN                PE+    +++E   EVDETG+E KDIELVM QA V RS+A+KAL   D DIV++IM L+
Sbjct:   57 AIGKLGLKHVPGITRVTLRRPKNILFVINQPDVYRSPSSNTWIIFGEAKIEDLNSQAQASAAQQLSAAEA-AGNGEHAGHEHIDLGKGKAPETEKKEEEEEEEGEVDETGLEAKDIELVMAQANVSRSKAIKALKENDNDIVNSIMALS 204          
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_BOTFB (Nascent polypeptide-associated complex subunit alpha OS=Botryotinia fuckeliana (strain B05.10) GN=egd2 PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.745e-31
Identity = 76/152 (50.00%), Postives = 99/152 (65.13%), Query Frame = 1
Query:  289 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPN-----------------TGNVASKPESSAMVQDD-EEVDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690
            ++ KLG+  +PG++RVT+++ KNILFVI++P+V+KSPTS+TYIVFGEAKIEDL+SQ Q  AA Q      +                  G      E     +DD EEVD TG+E KDIELVMTQA V R++AVKAL   D DIV++IM L+
Sbjct:   60 SIAKLGLTRVPGITRVTLRRPKNILFVINQPEVYKSPTSNTYIVFGEAKIEDLNSQAQASAAAQLAAQESHDHAGHDHSGHDHSHDHGKGKAVDTEEKKEEEEDDTEEVDATGLEDKDIELVMTQASVSRNKAVKALKENDNDIVNSIMALS 211          
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_CAEEL (Nascent polypeptide-associated complex subunit alpha OS=Caenorhabditis elegans GN=Y65B4BR.5 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.586e-31
Identity = 73/136 (53.68%), Postives = 92/136 (67.65%), Query Frame = 1
Query:  298 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMVQDDEE-----VDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690
            KLG+K + GVSRV ++KSKNILFVI+KPDVFKSP SDTYI+FGEAKIEDL+   Q  A E  K            P+   + +D+ E      D TG+E KDIELV++QA   R++A++AL  AD DIV+AIM LT
Sbjct:   68 KLGLKQVTGVSRVCIRKSKNILFVINKPDVFKSPGSDTYIIFGEAKIEDLTQHAQMSAIENLK-------PTREAPQLKTVEEDENEDVEFKEDSTGIEEKDIELVISQANTTRNKAIRALKEADNDIVNAIMSLT 196          
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_ASPOR (Nascent polypeptide-associated complex subunit alpha OS=Aspergillus oryzae GN=egd2 PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.586e-31
Identity = 73/148 (49.32%), Postives = 102/148 (68.92%), Query Frame = 1
Query:  289 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASK----------PESSAMVQDDEE----VDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690
            A+ KLG+K +PG++RVT+++ KNILFVI++PDV++SP+S+T+I+FGEAKIEDL+SQ Q  AA+Q        G  A            PE+    +++E+    VDE+G+E KDIELVM QA V R +AVKAL   D DIV++IM L+
Sbjct:   54 AIGKLGLKHVPGITRVTLRRPKNILFVINQPDVYRSPSSNTWIIFGEAKIEDLNSQAQASAAQQLAAAEAAAGEHAGHDHEHDLGTKVPEAETKKEEEEDDGEPVDESGLEAKDIELVMAQANVSRKKAVKALRENDNDIVNSIMALS 201          
The following BLAST results are available for this feature:
BLAST of FC930778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
NACA2_HUMAN3.134e-3558.09Nascent polypeptide-associated complex subunit alp... [more]
NACA_ASPCL6.535e-3352.35Nascent polypeptide-associated complex subunit alp... [more]
NACA_NEOFI1.901e-3251.68Nascent polypeptide-associated complex subunit alp... [more]
NACA_ASPFU1.901e-3251.68Nascent polypeptide-associated complex subunit alp... [more]
NACA_EMENI4.236e-3250.68Nascent polypeptide-associated complex subunit alp... [more]
NACA_CAEBR7.225e-3256.49Nascent polypeptide-associated complex subunit alp... [more]
NACA_COCIM2.102e-3150.34Nascent polypeptide-associated complex subunit alp... [more]
NACA_BOTFB2.745e-3150.00Nascent polypeptide-associated complex subunit alp... [more]
NACA_CAEEL3.586e-3153.68Nascent polypeptide-associated complex subunit alp... [more]
NACA_ASPOR3.586e-3149.32Nascent polypeptide-associated complex subunit alp... [more]

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Properties
Property NameValue
Genbank descriptionC34108H11EF PostHarvP1 Citrus clementina cDNA clone C34108H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930778 ID=FC930778; Name=FC930778; organism=Citrus clementina; type=EST; length=736bp
GAATCGGGCATTTAGGGTTTTAGTCTTCTCTCTTTCGTGTCCGCTTCTCG
TTCTCAAGTCTCAACACCCAGCCCAAAAAAAATGACTGCTCAGTCTCAAG
AAGAGCTCCTCGCTGCCCATCTTGAAGAGCAAAAGCTCAACCCCGATGAG
CCTGTAGTCGAGGACGACGATGATGAGGATGATGATGAGGAGGATGAGGA
TGATGACAAGGATGAAGACGATGTGGAAGGGAAAGGAGATGGAAGTGGTC
GCTCAAAACAGAGCAGGAGTGAAAAGAAGAGTCGGAAAGCAATGTTGAAA
CTTGGAATGAAGCCAATCCCTGGCGTCAGTCGAGTTACAGTTAAAAAGAG
CAAAAATATTTTGTTTGTTATCTCCAAACCAGATGTTTTCAAGAGTCCTA
CATCTGACACATACATTGTCTTTGGGGAAGCAAAGATCGAGGATCTGAGT
TCACAACTGCAAACTCAGGCTGCAGAGCAGTTCAAGGTCCCTCCTCCTAA
CACAGGTAATGTGGCATCAAAGCCTGAGTCATCGGCCATGGTTCAAGATG
ACGAAGAAGTAGATGAGACTGGTGTGGAGCCAAAGGACATTGAGTTGGTA
ATGACTCAAGCTGGGGTACCGAGGTCAAGGGCTGTGAAAGCACTCNAAGC
CGCAGATGGTGACATCGTTTCTGCCATTATGGAGCTAACAAATTGATGGT
CACTTTCTTAATTTATGTGCTCTGCTGAATGATCCC
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