FC930778

Overview
NameFC930778
Unique NameFC930778
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15214 contig Ccv1_Contig15214:1..736. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_SCLS1 (Nascent polypeptide-associated complex subunit alpha OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=egd2 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.363e-30
Identity = 77/157 (49.04%), Postives = 100/157 (63.69%), Query Frame = 1
Query:  289 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQF-----------------------KVPPPNTGNVASKPESSAMVQDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690
            ++ KLG+  +PG++RVT+++ KNILFVI+ P+V+KSPTS+TYIVFGEAKIEDL+SQ Q  AA Q                        K    +TG+   + E      D EEVD TG+E KDIELVMTQA V R++AVKAL   D DIV++IM L+
Sbjct:   61 SIAKLGLTRVPGITRVTLRRPKNILFVINNPEVYKSPTSNTYIVFGEAKIEDLNSQAQASAAAQLAAQESHDHAGHDHSGHDHSHDHGKGKAVDTGDEKKEEEE----DDTEEVDATGLEDKDIELVMTQASVSRNKAVKALKENDNDIVNSIMALS 213          
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_ASPTN (Nascent polypeptide-associated complex subunit alpha OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=egd2 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.780e-30
Identity = 74/147 (50.34%), Postives = 104/147 (70.75%), Query Frame = 1
Query:  289 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQF---KVPPPNTGN-------VASKPES---SAMVQDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690
            A+ KLG+K +PG++RVT ++ KNILFVI++P+V++SP+S+T+I+FGEAKIEDL++Q Q  AA+Q    +    + G+        A +PE+    A   D EEVDE+G+E KDIELVM QA V R +AVKAL   D DIV++IM L+
Sbjct:   55 AIGKLGLKLVPGITRVTFRRPKNILFVINQPEVYRSPSSNTWIIFGEAKIEDLNAQAQASAAQQLAAQEAAQEHAGHEHEDILGKAKEPEAEKKEAEEDDGEEVDESGLEAKDIELVMAQANVSRKKAVKALRENDNDIVNSIMALS 201          
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_ASPNC (Nascent polypeptide-associated complex subunit alpha OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=egd2 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.324e-30
Identity = 73/147 (49.66%), Postives = 100/147 (68.03%), Query Frame = 1
Query:  289 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPN---------TGNVASKPESSAMVQ----DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690
            A+ KLG+K +PG++RVT+++ KNILFVI++PDV++SP+S+T+I+FGEAKIEDL++  Q  AA+Q      N                PE+ A  +    D EEVDE+G+E KDIELVM QA V R +AVKAL   D DIV++IM L+
Sbjct:   55 AIGKLGLKHVPGITRVTLRRPKNILFVINQPDVYRSPSSNTWIIFGEAKIEDLNATAQATAAQQLAEAAANEHAGHDHEHDHGKGKAPEAEAKKEEEEDDGEEVDESGLEAKDIELVMAQANVSRKKAVKALRENDNDIVNSIMALS 201          
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_PHANO (Nascent polypeptide-associated complex subunit alpha OS=Phaeosphaeria nodorum GN=EGD2 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.832e-30
Identity = 72/154 (46.75%), Postives = 101/154 (65.58%), Query Frame = 1
Query:  289 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVA--------------------SKPESSAMVQDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690
            A+ KLG+K I G++RVT+++ KNILFVI++PDV+KSP+S+T+I+FGEAKIEDL+SQ Q  AA+Q       + + +                     + +     +DDEEVD++G+E KDIELVM QA V R +AVKAL   D DIV++IM L+
Sbjct:   57 AIAKLGLKHIDGITRVTLRRPKNILFVINQPDVYKSPSSNTWIIFGEAKIEDLNSQAQASAAQQLAQAEAASHDHSGHDHDHDHKGKGKAVEDKKDDEEDEEEEEEDDEEVDDSGLEAKDIELVMQQASVSRKKAVKALKENDNDIVNSIMALS 210          
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_NEUCR (Nascent polypeptide-associated complex subunit alpha OS=Neurospora crassa GN=egd-2 PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.356e-29
Identity = 70/142 (49.30%), Postives = 96/142 (67.61%), Query Frame = 1
Query:  289 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSS--------QLQTQAAEQFKVPPPNTGNVASKPESSAMVQDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690
            A+ KL ++ +PG++RVT+++ KNILFVI+ P+V+KSP S+TYIVFGEAKIEDL++        QL +Q+AE       +    A K +      + EEVD  G+E KDIELVMTQA V R +A+KAL   D DIV++IM L+
Sbjct:   58 AIEKLHLQRVPGITRVTLRRPKNILFVINNPEVYKSPNSNTYIVFGEAKIEDLNASAQAAAAQQLASQSAEHDHAGHTHEHEEAGKAKEEEEEDEGEEVDAEGIEDKDIELVMTQANVSRKKAIKALKENDNDIVNSIMALS 199          
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_MAGGR (Nascent polypeptide-associated complex subunit alpha OS=Magnaporthe grisea GN=EGD2 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.383e-29
Identity = 71/144 (49.31%), Postives = 94/144 (65.28%), Query Frame = 1
Query:  289 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMV----------QDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690
            A+ KL +  + G++RVT+++ KNILFVI+ P+V+KSP S TYIVFGEAKIEDL++  Q  AA+Q      +  + A      A             DDEEVD  G+E KDIELVMTQAGV R++A+KAL   D DIV++IM L+
Sbjct:   57 AIEKLHLIRVDGITRVTLRRPKNILFVINNPEVYKSPNSGTYIVFGEAKIEDLNASAQAAAAQQLASSAGHDHDHAGHSHGEAKASEGDAKKEEEDDDEEVDADGIEDKDIELVMTQAGVSRTKAIKALKENDNDIVNSIMALS 200          
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_AJECN (Nascent polypeptide-associated complex subunit alpha OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=EGD2 PE=3 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 4.383e-29
Identity = 70/151 (46.36%), Postives = 98/151 (64.90%), Query Frame = 1
Query:  289 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPP----------------NTGNVASKPESSAMVQDDEEV-DETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690
            A+ KLG+K +PG++RVT+++ K ILFVI++PDV++SP+S+T+I+FGEAKIEDL+SQ Q  AA+Q                        G      +     +DDEEV D +G+E KDIELVM QA V R++A+KAL   D DIV++IM L+
Sbjct:   57 AIGKLGLKHVPGITRVTLRRPKGILFVINQPDVYRSPSSNTWIIFGEAKIEDLNSQAQASAAQQLAAAEAAGSNEHAGHDHASHDHGKGKAVESADKKDEEEDDEEVFDASGLEAKDIELVMAQASVSRNKAIKALKENDNDIVNSIMALS 207          
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_CHAGB (Nascent polypeptide-associated complex subunit alpha OS=Chaetomium globosum GN=EGD2 PE=3 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 7.477e-29
Identity = 70/142 (49.30%), Postives = 95/142 (66.90%), Query Frame = 1
Query:  289 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQF---KVPPPNTGNVASKPESSAMVQ-----DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690
            A+ KL +  +PG++RVT+++ KNILFVI+ P+V+KSP S+TYIVFGEAKIEDL++  Q  AA+Q         + G+       +A  +     D EEVD  G+E KDIELVMTQA V R +A+KAL   D DIV++IM L+
Sbjct:   58 AIEKLHLTRVPGITRVTLRRPKNILFVINNPEVYKSPNSNTYIVFGEAKIEDLNASAQAAAAQQLANQTAEHDHAGHTHDHKHEAAKEEEEEEDDGEEVDAEGIEDKDIELVMTQANVSRKKAIKALKENDNDIVNSIMALS 199          
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_GIBZE (Nascent polypeptide-associated complex subunit alpha OS=Gibberella zeae GN=EGD2 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.080e-27
Identity = 70/151 (46.36%), Postives = 100/151 (66.23%), Query Frame = 1
Query:  289 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQF--KVPPPNTGNVASKPESSAMV---------------QDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690
            A+ KL +  IPG++RVT+++ KNILFVI+ P+V+KSP S+TYIVFGEAKIED+++  Q  AA Q   +    ++G+   +P  +                  +++EEVD +G+E KDIELVMTQA V R++AVKAL   D DIV++IM L+
Sbjct:   58 ALEKLHLTRIPGITRVTLRRPKNILFVINTPEVYKSPNSNTYIVFGEAKIEDVNAAAQQAAAAQLASQNAEDHSGHNHGEPSKAVEADEKKEDKEDDEDEEEEEEEEVDASGLEDKDIELVMTQANVSRNKAVKALKENDNDIVNSIMALS 208          
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_PICGU (Nascent polypeptide-associated complex subunit alpha OS=Pichia guilliermondii GN=EGD2 PE=3 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.906e-24
Identity = 62/148 (41.89%), Postives = 95/148 (64.19%), Query Frame = 1
Query:  298 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQF----------------KVPPPNTGNVASKPESSAMVQDDE-EVDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690
            KL +KP+PG++RVT K+  N+++ I +PDVFKS  + TY+VFGEAK++D++ ++    A+Q                 K P   T ++ +       V++DE EVDETG++ KDIE+++ Q  V R++AVKAL A  GD+V+AIMEL+
Sbjct:   32 KLHLKPVPGITRVTFKQKGNLIYAIEQPDVFKS-AAGTYVVFGEAKVDDMNKRIAEAQAQQEQQEALTKAAADAETADKSPESITNDLQNASLEDKTVEEDEGEVDETGLDSKDIEIIVEQTQVSRAKAVKALRAHKGDMVNAIMELS 178          
The following BLAST results are available for this feature:
BLAST of FC930778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
NACA_SCLS11.363e-3049.04Nascent polypeptide-associated complex subunit alp... [more]
NACA_ASPTN1.780e-3050.34Nascent polypeptide-associated complex subunit alp... [more]
NACA_ASPNC2.324e-3049.66Nascent polypeptide-associated complex subunit alp... [more]
NACA_PHANO8.832e-3046.75Nascent polypeptide-associated complex subunit alp... [more]
NACA_NEUCR3.356e-2949.30Nascent polypeptide-associated complex subunit alp... [more]
NACA_MAGGR4.383e-2949.31Nascent polypeptide-associated complex subunit alp... [more]
NACA_AJECN4.383e-2946.36Nascent polypeptide-associated complex subunit alp... [more]
NACA_CHAGB7.477e-2949.30Nascent polypeptide-associated complex subunit alp... [more]
NACA_GIBZE1.080e-2746.36Nascent polypeptide-associated complex subunit alp... [more]
NACA_PICGU1.906e-2441.89Nascent polypeptide-associated complex subunit alp... [more]

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Properties
Property NameValue
Genbank descriptionC34108H11EF PostHarvP1 Citrus clementina cDNA clone C34108H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930778 ID=FC930778; Name=FC930778; organism=Citrus clementina; type=EST; length=736bp
GAATCGGGCATTTAGGGTTTTAGTCTTCTCTCTTTCGTGTCCGCTTCTCG
TTCTCAAGTCTCAACACCCAGCCCAAAAAAAATGACTGCTCAGTCTCAAG
AAGAGCTCCTCGCTGCCCATCTTGAAGAGCAAAAGCTCAACCCCGATGAG
CCTGTAGTCGAGGACGACGATGATGAGGATGATGATGAGGAGGATGAGGA
TGATGACAAGGATGAAGACGATGTGGAAGGGAAAGGAGATGGAAGTGGTC
GCTCAAAACAGAGCAGGAGTGAAAAGAAGAGTCGGAAAGCAATGTTGAAA
CTTGGAATGAAGCCAATCCCTGGCGTCAGTCGAGTTACAGTTAAAAAGAG
CAAAAATATTTTGTTTGTTATCTCCAAACCAGATGTTTTCAAGAGTCCTA
CATCTGACACATACATTGTCTTTGGGGAAGCAAAGATCGAGGATCTGAGT
TCACAACTGCAAACTCAGGCTGCAGAGCAGTTCAAGGTCCCTCCTCCTAA
CACAGGTAATGTGGCATCAAAGCCTGAGTCATCGGCCATGGTTCAAGATG
ACGAAGAAGTAGATGAGACTGGTGTGGAGCCAAAGGACATTGAGTTGGTA
ATGACTCAAGCTGGGGTACCGAGGTCAAGGGCTGTGAAAGCACTCNAAGC
CGCAGATGGTGACATCGTTTCTGCCATTATGGAGCTAACAAATTGATGGT
CACTTTCTTAATTTATGTGCTCTGCTGAATGATCCC
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