FC930781
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP362_ARATH (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1) HSP 1 Score: 46.595 bits (109), Expect = 1.503e-11 Identity = 24/86 (27.91%), Postives = 41/86 (47.67%), Query Frame = 1 Query: 394 VV*GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 651 V+ G P+ VTY+ I + +DG +EA + M+ G P+ Y T++ + G E+A+ +E G PN T + + Sbjct: 341 VLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFI 426 HSP 2 Score: 42.743 bits (99), Expect = 1.503e-11 Identity = 32/133 (24.06%), Postives = 59/133 (44.36%), Query Frame = 2 Query: 2 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAE-MDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 397 ++ +L+ A + Y+E VF + + G KP L TYN ++ F + L E M I P+A ++ L+ + +++ +V + M+ G YN + K + EA +L+EM+ Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEED-GCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMV 341
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP393_ARATH (Pentatricopeptide repeat-containing protein At5g18950 OS=Arabidopsis thaliana GN=At5g18950 PE=2 SV=2) HSP 1 Score: 44.669 bits (104), Expect = 1.525e-11 Identity = 31/130 (23.85%), Postives = 50/130 (38.46%), Query Frame = 2 Query: 5 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 394 + ++ L + K E +F K G PD Y +I+ FCE + EM +K ++PN ++ ++ G +K + V M R G + N I C K EA + M Sbjct: 286 YQKIIKGLCMNKKQLEAYCIFKNL-KDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNM 414 HSP 2 Score: 44.669 bits (104), Expect = 1.525e-11 Identity = 18/48 (37.50%), Postives = 28/48 (58.33%), Query Frame = 1 Query: 403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 546 G+ PN++TY+ I GFCK+ E+ K Y+ + GL P+ Y +V Sbjct: 418 GVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP209_ARATH (Pentatricopeptide repeat-containing protein At3g02650, mitochondrial OS=Arabidopsis thaliana GN=At3g02650 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.702e-11 Identity = 42/134 (31.34%), Postives = 71/134 (52.99%), Query Frame = 2 Query: 5 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLC-KLRKCAEAKALLDEMLSK 403 FN ++ A + D E K V ++ ++ G+KPD+ TY +I + + ILAE +K K + ++ AL+ G+ K E+Y++ K+L M+R+G++ YN I S C K +A+ L +EM K Sbjct: 410 FNLVVHACSKTGDLDEAKEV-LKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQK 542
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP360_ARATH (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1) HSP 1 Score: 49.6766 bits (117), Expect = 1.957e-11 Identity = 26/103 (25.24%), Postives = 49/103 (47.57%), Query Frame = 2 Query: 89 GIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 397 G+ ++ T N ++ A C+ L+++ K + P+ ++ L++ + + E+ +++ M G GV YN I+ LCK K AK + EML Sbjct: 230 GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 332 HSP 2 Score: 39.2762 bits (90), Expect = 1.957e-11 Identity = 20/85 (23.53%), Postives = 39/85 (45.88%), Query Frame = 1 Query: 403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 657 G+ P+S TY + CK G+ E +K + M + + P+ + +M+ + G+ + AL + G +P+ L+ G Sbjct: 335 GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 419
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP141_ARATH (Pentatricopeptide repeat-containing protein At2g01740 OS=Arabidopsis thaliana GN=At2g01740 PE=2 SV=1) HSP 1 Score: 46.9802 bits (110), Expect = 1.972e-11 Identity = 23/87 (26.44%), Postives = 43/87 (49.43%), Query Frame = 1 Query: 403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 663 GM+ + Y I G C +G +EA + M S L P+ ++ TM+ K G + A+ + I +G+ P+ + +++ G+A Sbjct: 298 GMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIA 384 HSP 2 Score: 41.9726 bits (97), Expect = 1.972e-11 Identity = 25/100 (25.00%), Postives = 40/100 (40.00%), Query Frame = 2 Query: 98 PDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 397 P++ TY+ I FC+ M R ++ PN +F L+ G+ K E + + M R M V Y I CK + A+ + M+ Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMV 260
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP155_ARATH (Pentatricopeptide repeat-containing protein At2g15980 OS=Arabidopsis thaliana GN=At2g15980 PE=2 SV=1) HSP 1 Score: 44.669 bits (104), Expect = 1.978e-11 Identity = 23/67 (34.33%), Postives = 39/67 (58.21%), Query Frame = 2 Query: 197 IKPNASSFGALVAGFYKEEKYEDVNKV-LQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 394 IKPNA++F +++ FY+E + E V ++ +M E G V YNV + + C +EA+ + +EM Sbjct: 241 IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEM 307 HSP 2 Score: 44.2838 bits (103), Expect = 1.978e-11 Identity = 26/86 (30.23%), Postives = 43/86 (50.00%), Query Frame = 1 Query: 403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 660 G+ + V Y+ I G C + +AK+ +R M G+ Y +V CK GD ++ L +E KG+ + T+++LV GL Sbjct: 311 GVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGL 396
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PPR41_ARATH (Putative pentatricopeptide repeat-containing protein At1g13630 OS=Arabidopsis thaliana GN=At1g13630 PE=3 SV=2) HSP 1 Score: 45.8246 bits (107), Expect = 2.535e-11 Identity = 25/86 (29.07%), Postives = 43/86 (50.00%), Query Frame = 1 Query: 403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 660 G+ P+ T++ IYG+CK N EA+K ++ GL+P+ Y T++ G+ ++ +E A+G P T + GL Sbjct: 512 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGL 597 HSP 2 Score: 42.743 bits (99), Expect = 2.535e-11 Identity = 28/101 (27.72%), Postives = 43/101 (42.57%), Query Frame = 2 Query: 80 KTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 382 K G+ PDL Y+ VI C+ + EM K I PN+ + GAL+ G ++ + +L + G + +YN+ I K EA L Sbjct: 404 KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALEL 504
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP112_ARATH (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana GN=At1g71060 PE=2 SV=1) HSP 1 Score: 49.2914 bits (116), Expect = 3.331e-11 Identity = 27/108 (25.00%), Postives = 48/108 (44.44%), Query Frame = 2 Query: 80 KTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 403 K G +PD+ Y +I A C+ EM++++ KP+ F +L+ G E+K D + + + G YN + + C ++ +A +DEM K Sbjct: 259 KDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLK 366 HSP 2 Score: 38.891 bits (89), Expect = 3.331e-11 Identity = 26/91 (28.57%), Postives = 39/91 (42.86%), Query Frame = 1 Query: 403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGVSK 675 G+ PN+ TY ++ + +EA + Y+ MS P S Y MV C + A+ E KG +P SL+T L +K Sbjct: 367 GVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS---CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENK 454
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PPR5_ARATH (Putative pentatricopeptide repeat-containing protein At1g02420 OS=Arabidopsis thaliana GN=At1g02420 PE=3 SV=2) HSP 1 Score: 63.5438 bits (153), Expect = 5.619e-11 Identity = 33/118 (27.97%), Postives = 58/118 (49.15%), Query Frame = 2 Query: 50 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 403 E F E K G+KPD+ TYN +I +C+ ++ +M + P+ ++ ++ G + + +VL+ M+ YG V+ YN I + C R+ +A L+DEM+ K Sbjct: 228 EEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKK 345 HSP 2 Score: 23.8682 bits (50), Expect = 5.619e-11 Identity = 13/72 (18.06%), Postives = 30/72 (41.67%), Query Frame = 1 Query: 403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGW 618 G+ PN+ TY+ F + + + Y M + PN+ ++ + + A+ ++ + KG+ Sbjct: 346 GLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGF 417
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PPR50_ARATH (Putative pentatricopeptide repeat-containing protein At1g19290 OS=Arabidopsis thaliana GN=At1g19290 PE=3 SV=2) HSP 1 Score: 47.3654 bits (111), Expect = 7.167e-11 Identity = 28/132 (21.21%), Postives = 61/132 (46.21%), Query Frame = 2 Query: 8 NALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 403 N+L+ + E +++F + +KPD TYN ++ +C + +M +K + P ++ L+ G+ + + DV + +MM + G+ + + + +L KL EA L + +L++ Sbjct: 370 NSLINGYCKSGQLVEAEQIFSRM-NDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLAR 500 HSP 2 Score: 39.6614 bits (91), Expect = 7.167e-11 Identity = 24/87 (27.59%), Postives = 35/87 (40.23%), Query Frame = 1 Query: 409 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGV 669 KP TY +G+ K GN +EA M G+ P +Y T++ K E A+G P T +L+TG + Sbjct: 538 KPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNI 624 The following BLAST results are available for this feature:
BLAST of FC930781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 113
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930781 ID=FC930781; Name=FC930781; organism=Citrus clementina; type=EST; length=701bpback to top |