FC930782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930782 vs. ExPASy Swiss-Prot
Match: RS3A_CAEEL (40S ribosomal protein S3a OS=Caenorhabditis elegans GN=rps-1 PE=1 SV=2) HSP 1 Score: 213.772 bits (543), Expect = 6.473e-55 Identity = 109/174 (62.64%), Postives = 131/174 (75.29%), Query Frame = 1 Query: 133 AADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVI 654 A DPF++K+WYDIKAP+ F R VGKTL+ RTQGTKIASEGLK RVFEVSLGDL N E +RK +L AEDVQGKNVLTNF M+ T DKL S+V+KWHTLIEA VKTTD +TLR+F I FTK+ NQVK+T Y +TS+IR+IR +M + + CDLK +V K I + I Sbjct: 19 AVDPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDL-NNSEADFRKFKLIAEDVQGKNVLTNFHAMSMTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRVFVIAFTKKSVNQVKKTSYTKTSKIRKIRSEMIGCIEKEVTGCDLKEVVSKLIPDSI 191
BLAST of FC930782 vs. ExPASy Swiss-Prot
Match: RS3A_ARTSF (40S ribosomal protein S3a OS=Artemia sanfranciscana PE=2 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 6.473e-55 Identity = 107/174 (61.49%), Postives = 133/174 (76.44%), Query Frame = 1 Query: 139 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEE--HAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVI 654 DPF +KDWYD+KAPS F R++GKTLV RT GTKIAS+ LK RVFEVSL DL E E ++RK RL AE+VQG+ +LTNF GM+FTTDKLRSLV+KW TLIE VDVKTTD++ LR+FCIGFT++ ++TCYAQ +Q+R IR+KM EI+ + +S DLK V K I + I Sbjct: 23 DPFTRKDWYDVKAPSLFTNRDIGKTLVNRTAGTKIASDSLKGRVFEVSLADLQGESEAERSFRKFRLIAEEVQGRYLLTNFHGMDFTTDKLRSLVKKWQTLIECSVDVKTTDSYLLRVFCIGFTQKDQRSQRKTCYAQHTQVRAIRKKMTEIITKEISSGDLKEAVSKLIPDSI 196
BLAST of FC930782 vs. ExPASy Swiss-Prot
Match: RS3A_PICGU (40S ribosomal protein S1 OS=Pichia guilliermondii GN=RPS1 PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.442e-54 Identity = 101/172 (58.72%), Postives = 135/172 (78.49%), Query Frame = 1 Query: 139 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVI 654 DPF +K+W+DIKAP+ F R VGKTL+ ++ G K A++GLK RV EV+L DL E+HAYRK++LR ++VQGKN+LTNF G++FT+DKLRSLVRKW +L+EA V VKT D++ LR+F I FTKR PNQVK+T YAQ+S++R+IR+KM EIM + ++ L L +K I EVI Sbjct: 22 DPFTRKEWFDIKAPTTFENRAVGKTLINKSTGLKNAADGLKGRVIEVNLADLQGSEDHAYRKVKLRVDEVQGKNLLTNFHGIDFTSDKLRSLVRKWQSLVEANVTVKTADDYYLRVFAIAFTKRQPNQVKKTTYAQSSKLREIRKKMMEIMQREVSNSTLAQLTQKLIPEVI 193
BLAST of FC930782 vs. ExPASy Swiss-Prot
Match: RS3A_BRUMA (40S ribosomal protein S3a OS=Brugia malayi GN=Bm1_27225 PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 2.460e-54 Identity = 107/172 (62.21%), Postives = 130/172 (75.58%), Query Frame = 1 Query: 139 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVI 654 DPF +K+WYDIKAPS F V+++GKTLV RTQGTKIASEGLK RV+EVSLGDL N E +RK+RL EDVQG+ LTNF GM T DKL S+V+KWHTLIEA V VKT+D + LRLFCIGFTK+ Q+K+T YA++S+IRQIR KM E M + DLK + K + + I Sbjct: 20 DPFTRKEWYDIKAPSMFNVQHIGKTLVNRTQGTKIASEGLKGRVYEVSLGDL-NNAESEFRKMRLICEDVQGRTCLTNFHGMRLTRDKLCSIVKKWHTLIEANVAVKTSDGYLLRLFCIGFTKKNARQLKKTSYAKSSKIRQIRAKMVEYMQKEVQGSDLKDVCHKLVPDSI 190
BLAST of FC930782 vs. ExPASy Swiss-Prot
Match: RS3A_ANOGA (40S ribosomal protein S3a OS=Anopheles gambiae GN=RpS3A PE=2 SV=3) HSP 1 Score: 211.846 bits (538), Expect = 2.460e-54 Identity = 108/174 (62.07%), Postives = 130/174 (74.71%), Query Frame = 1 Query: 139 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE--EHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVI 654 DPF +KDWYD+KAP+ F+ R VGKTLV RTQGTKIAS+GLK RVFEVSL DL NE E ++RK +L AE V G++VLTNF GM TTDKLRS+V+KW TLIE VDVKTTD F LR+FCIGFT + ++TCYAQ SQI+ IR KM I+ + S DLK +VEK + + I Sbjct: 23 DPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVKKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSI 196
BLAST of FC930782 vs. ExPASy Swiss-Prot
Match: RS3A1_PICST (40S ribosomal protein S1-A OS=Pichia stipitis GN=RPS1A PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 2.460e-54 Identity = 99/172 (57.56%), Postives = 133/172 (77.33%), Query Frame = 1 Query: 139 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVI 654 DPF +KDW+DIKAPS F RNVGKTL+ R+ G K A++GLK R+ EV+L DL E+H+YR ++LR ++VQGKN+LTNF G++FT+DKLRSLVRKW +L+EA V VKT D++ LR+F + FTKR NQVK+T YAQ+S++R++R+KM EIM + ++ L L K I EVI Sbjct: 22 DPFTRKDWFDIKAPSTFENRNVGKTLINRSTGMKNAADGLKGRIVEVNLADLQGSEDHSYRNVKLRVDEVQGKNLLTNFHGLSFTSDKLRSLVRKWQSLVEANVTVKTADDYVLRVFALAFTKRQANQVKKTTYAQSSKLREVRKKMSEIMQREVSAVTLAQLTSKLIPEVI 193
BLAST of FC930782 vs. ExPASy Swiss-Prot
Match: RS3A_USTMA (40S ribosomal protein S1 OS=Ustilago maydis GN=RPS1 PE=3 SV=2) HSP 1 Score: 211.46 bits (537), Expect = 3.212e-54 Identity = 103/174 (59.20%), Postives = 130/174 (74.71%), Query Frame = 1 Query: 133 AADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVI 654 A DPF +KDWYDIKAP+ F RNVGKT V R+QG K A + LK R+ E SL DL ++E AYRK +L+ + +QG+ LTNF+GM+FT+DKLRSLVRKW +LIEA+ DVKTTD + LR+F I FTK+ NQVK+ YA++S IR IR+KM EI+ +A SCDL+ V K I EVI Sbjct: 19 AVDPFTRKDWYDIKAPTFFENRNVGKTFVNRSQGLKNADDSLKGRIVEASLADLNKDDEQAYRKFKLKVDGIQGRTCLTNFYGMDFTSDKLRSLVRKWQSLIEAHQDVKTTDGYLLRVFVIAFTKKRANQVKKNTYAKSSHIRAIRQKMFEIVQREANSCDLREFVAKLIPEVI 192
BLAST of FC930782 vs. ExPASy Swiss-Prot
Match: RS3A_AEDAE (40S ribosomal protein S3a OS=Aedes aegypti GN=AAEL005901 PE=2 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 3.212e-54 Identity = 106/174 (60.92%), Postives = 130/174 (74.71%), Query Frame = 1 Query: 139 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE--EHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVI 654 DPF +KDWYD+KAP+ F R VGKTLV RTQGT+IAS+GLK RVFEVSL DL N+ E ++RK +L AEDV G+NVL NF GM+ TTDKLRS+V+KW TLIE VDVKTTD + LR+FCIGFT + ++TCYAQ SQI++IRRKM I+ S DLK +V K + + I Sbjct: 23 DPFTRKDWYDVKAPNMFSNRQVGKTLVNRTQGTRIASDGLKGRVFEVSLADLQNDTDAERSFRKFKLIAEDVHGRNVLCNFHGMDLTTDKLRSMVKKWQTLIECSVDVKTTDGYLLRVFCIGFTIKDSVSQRKTCYAQHSQIKEIRRKMTTIITRDVTSSDLKEVVNKLLPDSI 196
BLAST of FC930782 vs. ExPASy Swiss-Prot
Match: RS3A_CULQU (40S ribosomal protein S3a OS=Culex quinquefasciatus GN=CPIJ008584 PE=3 SV=2) HSP 1 Score: 211.075 bits (536), Expect = 4.196e-54 Identity = 105/174 (60.34%), Postives = 130/174 (74.71%), Query Frame = 1 Query: 139 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE--EHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVI 654 DPF +KDWYD+KAP+ F R VGKTLV RTQGT+IAS+GLK RVFEVSL DL N+ E ++RK +L AEDV G+NVL NF GM+ TTDKLRS+V+KW TLIE VDVKTTDN+ LR+FCIGFT + ++TCYAQ SQI+ IR+ M +I+ S DLK +V K + + I Sbjct: 23 DPFTRKDWYDVKAPNMFSCRQVGKTLVNRTQGTRIASDGLKGRVFEVSLADLQNDTDAERSFRKFKLIAEDVHGRNVLCNFHGMDLTTDKLRSMVKKWQTLIECSVDVKTTDNYLLRVFCIGFTIKDQVSQRKTCYAQHSQIKAIRKNMTQIITNNVTSSDLKEVVNKLLPDSI 196
BLAST of FC930782 vs. ExPASy Swiss-Prot
Match: RS3A1_SCHPO (40S ribosomal protein S1-A OS=Schizosaccharomyces pombe GN=rps101 PE=2 SV=2) HSP 1 Score: 211.075 bits (536), Expect = 4.196e-54 Identity = 102/172 (59.30%), Postives = 131/172 (76.16%), Query Frame = 1 Query: 139 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVI 654 DPF++KDWYDIKAP+ F V+NVGKTLV RT G K A++ LK R+ EVSL DL +EEH++RK++LR ED+QGK+ LT+F G + T+DKLRSLVRKW + IEA +KTTD + R+F IGFT R NQVK+T YAQ+SQIR I +KM +++ QA C +K LV+K I EVI Sbjct: 22 DPFSRKDWYDIKAPAFFEVKNVGKTLVNRTAGLKNANDSLKGRILEVSLADLQKDEEHSFRKVKLRVEDIQGKSCLTSFNGFDMTSDKLRSLVRKWQSTIEANQTIKTTDGYLCRIFVIGFTSRRVNQVKKTTYAQSSQIRAIHQKMFQVIQNQANGCSMKELVQKLIPEVI 193 The following BLAST results are available for this feature:
BLAST of FC930782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930782 ID=FC930782; Name=FC930782; organism=Citrus clementina; type=EST; length=656bpback to top |