FC930789

Overview
NameFC930789
Unique NameFC930789
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: Y4LA_RHISN (Uncharacterized short-chain type dehydrogenase/reductase y4lA OS=Rhizobium sp. (strain NGR234) GN=NGR_a02730 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13
Identity = 53/191 (27.75%), Postives = 81/191 (42.41%), Query Frame = 1
Query:  124 QGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPT----LEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRT 684
            +G  A+VTG   G+G A    ++  G  V       +    C   +  +         D++       L  T    F G +++ VNN     L P     L+ +   +   M+TN       C+ A P + A G  +IV MSS  G+      T Y+ +K AMN L+ +LA ++    IR N+VAP  I T
Sbjct:    5 EGKVAVVTGAGAGIGKACALAIAREGGRVVVADLDGSAAIACTAQIAAEAGNALAMAMDIADAQAVAALFETAERHFGG-VDLLVNNASAMHLTPRDRAILDLDLAVWDQTMATNLRGTLLCCRQAIPRMIARGGGAIVNMSSCQGLSGDTAQTSYAVSKAAMNMLSASLATQYGHAQIRCNAVAPGLIMT 194          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: HETN_ANASP (Ketoacyl reductase hetN OS=Anabaena sp. (strain PCC 7120) GN=hetN PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13
Identity = 47/187 (25.13%), Postives = 86/187 (45.99%), Query Frame = 1
Query:  118 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYI 678
            +L G T L+TG ++GLG+ +   L+   ATV   SR+++ L +  + ++  G K      DV +  Q   L+     +  G +++ +NN G  +      Y+  +   + +TN  +A  L +L  P +   G+  IV ++S  G       +VYSA+K  +      +  E     +  + V P Y+
Sbjct:    3 TLTGKTVLLTGASRGLGVYIARALAKEQATVVCVSRSQSGLAQTCNAVKAAGGKAIAIPFDVRNTSQLSALVQQAQDIV-GPIDVLINNAGIEINGTFANYSLAEIQSIFNTNLLAAMELTRLLLPSMMERGSGRIVNIASLAGKKGVAFNSVYSASKAGLIMWTDAMRQELVGTGVNISVVCPGYV 188          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: GS39_BACSU (General stress protein 39 OS=Bacillus subtilis GN=ydaD PE=1 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13
Identity = 61/193 (31.61%), Postives = 93/193 (48.19%), Query Frame = 1
Query:  121 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE-LNECIHHLQMKGLKVTGSVCDVSSRPQ-RQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL-EYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTV-YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTP 687
            L+G  AL+TGG  G+G AV    +  GA +    + E E   E    ++ +G+K      DV       + +  TV  L  G L+I VNN G    K ++ +  +E       TNF S F+L + A   L+   A   ++ ++++     N   + Y+ATKGA+N   + +A    KD IR N+VAP  I TP
Sbjct:   40 LKGKVALITGGDSGIGRAVSVAYAKEGADIAIVYKDEHEDAEETKKRVEQEGVKCLLIAGDVGEEEFCNEAVEKTVKEL--GGLDILVNNAGEQHPKESIKDITSEQLHRTFKTNFYSQFYLTKKAIDYLKPGSA---IINTTSINPYVGNPTLIDYTATKGAINAFTRTMAQALVKDGIRVNAVAPGPIWTP 227          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: DHB12_XENTR (Estradiol 17-beta-dehydrogenase 12 OS=Xenopus tropicalis GN=hsd17b12 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13
Identity = 54/190 (28.42%), Postives = 86/190 (45.26%), Query Frame = 1
Query:  127 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFS----LVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRT 684
            G  A+VTG T G+G A  EEL+  G  +   SR+  +L E    ++ K  KV   +         +      S L + ++ + VNNVG S   P       D       +++ N  S   + +L  P +   G   I+ +SSA G+    + TVYSATK  ++  ++ L  E+    +   SV P+Y+ T
Sbjct:   56 GKWAVVTGATDGIGKAYAEELAKRGMNIVLISRSPEKLEEVAKQIKEK-FKVETKIIAADFGKPTEIYGRIESGLRDLEIGVLVNNVGVSYEHPEYFLEIPDLENTLDKMININITSVCQMTRLVLPGMLGRGRGVILNISSASGMYPVPLLTVYSATKAFVDFFSRGLQAEYRSKGVTVQSVLPFYVAT 244          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: HCDR_XANP2 (2-(R)-hydroxypropyl-CoM dehydrogenase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=xecD PE=1 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 6.852e-13
Identity = 59/194 (30.41%), Postives = 85/194 (43.81%), Query Frame = 1
Query:  136 ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIH-HLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTS------VLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            A+VTG + G GLA+       G  V     +   L E    H      KV     DV+        I      F G +++ VNN G +      VL  T     E F  VM+ N    F  C+   P +   GA  IV ++S   +V+    + Y+ +KGA+ QL K++A ++A   IR N+V P  I TP T+
Sbjct:    5 AIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQF-GAIDVLVNNAGITGNSEAGVLHTT---PVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQ 194          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: FABG_STAAW (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MW2) GN=fabG PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.852e-13
Identity = 53/189 (28.04%), Postives = 92/189 (48.68%), Query Frame = 1
Query:  133 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECI-HHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            +ALVTG ++G+G ++  +L+  G  V        E  E +   ++ KG+       +V+   + + +I  V S F G L++ VNN G +     +    +++  V+ TN +  F+  Q A P +    + +I+ +SS +G V       Y ATK  +  L K+ A E A   I  N+VAP +I +  T+
Sbjct:    6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTD 193          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: FABG_STAAS (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MSSA476) GN=fabG PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.852e-13
Identity = 53/189 (28.04%), Postives = 92/189 (48.68%), Query Frame = 1
Query:  133 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECI-HHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            +ALVTG ++G+G ++  +L+  G  V        E  E +   ++ KG+       +V+   + + +I  V S F G L++ VNN G +     +    +++  V+ TN +  F+  Q A P +    + +I+ +SS +G V       Y ATK  +  L K+ A E A   I  N+VAP +I +  T+
Sbjct:    6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTD 193          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: FABG_STAAR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MRSA252) GN=fabG PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.852e-13
Identity = 53/189 (28.04%), Postives = 92/189 (48.68%), Query Frame = 1
Query:  133 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECI-HHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            +ALVTG ++G+G ++  +L+  G  V        E  E +   ++ KG+       +V+   + + +I  V S F G L++ VNN G +     +    +++  V+ TN +  F+  Q A P +    + +I+ +SS +G V       Y ATK  +  L K+ A E A   I  N+VAP +I +  T+
Sbjct:    6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTD 193          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: FABG_STAAN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain N315) GN=fabG PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.852e-13
Identity = 53/189 (28.04%), Postives = 92/189 (48.68%), Query Frame = 1
Query:  133 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECI-HHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            +ALVTG ++G+G ++  +L+  G  V        E  E +   ++ KG+       +V+   + + +I  V S F G L++ VNN G +     +    +++  V+ TN +  F+  Q A P +    + +I+ +SS +G V       Y ATK  +  L K+ A E A   I  N+VAP +I +  T+
Sbjct:    6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTD 193          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: FABG_STAAM (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=fabG PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.852e-13
Identity = 53/189 (28.04%), Postives = 92/189 (48.68%), Query Frame = 1
Query:  133 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECI-HHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            +ALVTG ++G+G ++  +L+  G  V        E  E +   ++ KG+       +V+   + + +I  V S F G L++ VNN G +     +    +++  V+ TN +  F+  Q A P +    + +I+ +SS +G V       Y ATK  +  L K+ A E A   I  N+VAP +I +  T+
Sbjct:    6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTD 193          
The following BLAST results are available for this feature:
BLAST of FC930789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
Y4LA_RHISN5.246e-1327.75Uncharacterized short-chain type dehydrogenase/red... [more]
HETN_ANASP5.246e-1325.13Ketoacyl reductase hetN OS=Anabaena sp. (strain PC... [more]
GS39_BACSU5.246e-1331.61General stress protein 39 OS=Bacillus subtilis GN=... [more]
DHB12_XENTR5.246e-1328.42Estradiol 17-beta-dehydrogenase 12 OS=Xenopus trop... [more]
HCDR_XANP26.852e-1330.412-(R)-hydroxypropyl-CoM dehydrogenase OS=Xanthobac... [more]
FABG_STAAW6.852e-1328.043-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAS6.852e-1328.043-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAR6.852e-1328.043-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAN6.852e-1328.043-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAM6.852e-1328.043-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]

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Properties
Property NameValue
Genbank descriptionC34109A10EF PostHarvP1 Citrus clementina cDNA clone C34109A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930789 ID=FC930789; Name=FC930789; organism=Citrus clementina; type=EST; length=696bp
GAAGCAAACTAAGGCAATATAATAGCGGCCAGCAATACTAGAAGAGGAAG
AGACAGAGCAGAGATCAGAATGGCTCAGCCTCAGCAGACAGAGAGCCATA
GCAGGCAAAACAGATGGAGTCTTCAGGGCATGACAGCTCTTGTTACTGGC
GGCACCAAAGGACTCGGGCTTGCTGTTGTAGAGGAACTGTCAATGCTAGG
CGCCACTGTGCATACATGCTCCAGGACTGAAACAGAGCTTAATGAATGTA
TACATCACCTGCAGATGAAAGGTTTGAAAGTCACCGGTTCAGTCTGTGAT
GTATCGTCTCGACCTCAAAGACAGACGCTAATCAACACAGTCTCCTCTCT
GTTTAATGGCAAACTTAACATCTTTGTAAACAATGTTGGAACAAGTGTAC
TAAAGCCAACTCTCGAGTACAATGCTGAAGATTTTTCATTAGTAATGTCT
ACAAATTTCGAGTCTGCCTTCCACTTATGTCAACTTGCACATCCTCTGTT
GAGAGCTTCTGGGGCAGCAAGCATTGTTCTCATGTCTTCAGCACTAGGCA
TTGTATCAGCAAACGTTGGAACCGTCTATTCAGCTACTAAAGGAGCAATG
AATCAACTTGCAAAAAATTTGGCATGTGAGTGGGCAAAAGACAACATAAG
GACCAATTCTGTCGCTCCTTGGTACATCAGAACTCCCTTTACTGAA
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