FC930789

Overview
NameFC930789
Unique NameFC930789
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: BACC_BACAM (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus amyloliquefaciens GN=bacC PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.801e-12
Identity = 58/202 (28.71%), Postives = 88/202 (43.56%), Query Frame = 1
Query:  118 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTET--------ELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQL-AKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            +L   T L+TGG  G+G A V+      A V      E         E N+ +H +Q           D+++ P  Q  I +    F G L++ +NN G  ++ P  E    D++ V++ N    F + + A   +  SG  +I+   S  G+V+      Y+A+KG + Q  A       AK NIR N V P  I TP  E
Sbjct:    2 NLTDKTVLITGGASGIGYAAVQAFLNQQANVVVADIDEAQGEAMIRKENNDRLHFVQT----------DITNEPACQNAILSAVDKFGG-LDVLINNAGIEIVAPIHEMELSDWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVGGVVAWPDIPAYNASKGGVLQTDAFYRPSIIAKHNIRVNCVCPGIIDTPLNE 192          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: YXBG_BACSU (Uncharacterized oxidoreductase yxbG OS=Bacillus subtilis GN=yxbG PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12
Identity = 50/193 (25.91%), Postives = 89/193 (46.11%), Query Frame = 1
Query:  121 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL-EYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            L+  TA++TG   G+G A  E  +  GA V      + ++ E +  ++  G +      DVS     +   + +     G ++I  NN G       + EY  + F  +++ +    F   +   PL+  +G  SI+  SS  G  +    + Y+A KG +  L K +A ++A++ IR NS++P  I TP  +
Sbjct:    4 LENKTAVITGAATGIGQATAEVFANEGARVIIGDINKDQMEETVDAIRKNGGQAESFHLDVSDENSVKAFADQIKDAC-GTIDILFNNAGVDQEGGKVHEYPVDLFDRIIAVDLRGTFLCSKYLIPLMLENGG-SIINTSSMSGRAADLDRSGYNAAKGGITNLTKAMAIDYARNGIRVNSISPGTIETPLID 194          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: Y4VI_RHISN (Uncharacterized short-chain type dehydrogenase/reductase y4vI OS=Rhizobium sp. (strain NGR234) GN=NGR_a01150 PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12
Identity = 56/189 (29.63%), Postives = 90/189 (47.62%), Query Frame = 1
Query:  127 GMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTS-VLKPTLEYNAEDFSLVMSTNFESAFHL-CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTP 687
            G   +VTG   G+G A+V+  +  G  V      ++ + E   +L   G    G   DVS       L   +   F+ ++ + VNN G    +  T +   EDF   ++ N   A+ + C+ A   L   GAA IV ++S  G++     + Y+A+K  +  + K+LAC WA   IR  +VAP ++RTP
Sbjct:    9 GRVIVVTGAAGGIGRALVDIFAANGDVVVAVDLPDSGVIELGQNL---GEPHLGLEVDVSREDDVVALRALLEKRFS-RIEVLVNNAGIGPTMAATADTALEDFQRALAINLVGAYSVACETAK--LMKPGAA-IVNVASLAGLLGNPKRSAYAASKAGLISITKSLACRWASRGIRVTAVAPGHVRTP 190          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: FABG_VIBHA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Vibrio harveyi GN=fabG PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12
Identity = 52/193 (26.94%), Postives = 90/193 (46.63%), Query Frame = 1
Query:  118 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            +L+G  ALVTG ++G+G A+ E L   GATV   + +E        +L   G  +  +V DV S       IN       G ++I VNN G +     +    ++++ +++TN    + + +     +    A  I+ + S +G +     T Y+A K  +    K++A E A   +  N+VAP +I T  T+
Sbjct:    2 NLEGKIALVTGASRGIGRAIAELLVERGATVIGTATSEGGAAAISEYLGENGKGLALNVTDVESIEATLKTINDEC----GAIDILVNNAGITRDNLLMRMKDDEWNDIINTNLTPIYRMSKAVLRGMMKKRAGRIINVGSVVGTMGNAGQTNYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTK 190          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: CBR4_XENLA (Carbonyl reductase family member 4 OS=Xenopus laevis GN=cbr4 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12
Identity = 58/189 (30.69%), Postives = 88/189 (46.56%), Query Frame = 1
Query:  142 VTGGTKGLGLAVVEELSMLGATVHTCSRT----ETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFT 693
            V GG++G+G AV + L+     V   SR     +  + E   HL +         CDVS   + Q     + +   G ++  VN+ G S     L   +ED   ++S N       C++A   +      SIV + S +G    N+G ++Y A+K  +   +K+LA E AK NIR N VAP +IRT  T
Sbjct:    7 VFGGSRGIGKAVAKLLAQKDYKVAVISRNLEVAQAAVTEIGAHLALS--------CDVSKENEIQCTFKEIKNNL-GNIDYLVNSAGISRDALLLRTRSEDIMSLLSINLVGTIQTCKVALKGMIQQQGGSIVNIGSIVGH-KGNIGQSIYGASKEGLIGFSKSLAKEVAKRNIRVNVVAPGFIRTDMT 185          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: CBR4_DANRE (Carbonyl reductase family member 4 OS=Danio rerio GN=cbr4 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12
Identity = 57/186 (30.65%), Postives = 83/186 (44.62%), Query Frame = 1
Query:  136 ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFT 693
            A+V GG++G+G A  + L+  G  +   SR +         L   G    G  CDVS   + Q    T++    G +   VN  G +     L   +ED   V+ TN   +   C+ A   + + G A IV + S +G+       VYSA+K  +    ++LA E A  NIR N VAP  I T  T
Sbjct:    5 AVVFGGSRGIGRAASKLLAQRGHRIVLLSRNKEAAQSTAQSLP--GENHLGLSCDVSKEEEVQKAFETINKTC-GTVGFLVNAAGINRDALLLRSKSEDMLSVLHTNLLGSMLTCKAAVRNMLSHGGA-IVNIGSVVGVKGNAGQCVYSASKAGLEGFTRSLAKEVASRNIRVNLVAPGLIHTDMT 186          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: DHG2_BACSU (Glucose 1-dehydrogenase 2 OS=Bacillus subtilis GN=ycdF PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.292e-11
Identity = 54/191 (28.27%), Postives = 89/191 (46.60%), Query Frame = 1
Query:  121 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETE-LNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVG-TSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLA-HPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRT 684
            L G TA+VTG +KG+G A+ E        V     ++    +E +  ++  G K      DVS     Q L++T    F G L++ VNN G   V     E + ED+  V+  N    F   + A + +++ +   +++ +SS    +   V   YS +KG +  + + LA  +A   IR N++AP  I T
Sbjct:    5 LTGKTAIVTGSSKGIGKAIAERFGKEKMNVVVNYHSDPSGADETLEIIKQNGGKAVSVEADVSKEEGIQALLDTALEHF-GTLDVMVNNSGFNGVEAMPHEMSLEDWQRVIDVNVTGTFLGAKAALNHMMKNNIKGNVLNISSVHQQIPRPVNVQYSTSKGGIKMMTETLALNYADKGIRVNAIAPGTIAT 194          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: DH12B_DANRE (Estradiol 17-beta-dehydrogenase 12-B OS=Danio rerio GN=hsd17b12b PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.292e-11
Identity = 56/203 (27.59%), Postives = 95/203 (46.80%), Query Frame = 1
Query:  112 RWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC----DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAED----FSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            R S  G  A+VTG T G+G A  EEL+  G  +   SRT+ +L+E    ++ K    T ++      V   P+ +      S L   ++ + VNNVG S   P    N  D     + +++ N  S   + +L  P +       I+ ++SA G+    + T+YS+TK  ++  ++ L  E+    I   SV P+Y+ T  ++
Sbjct:   43 RASSLGKWAVVTGATDGIGKAYAEELARRGFAIVLISRTQEKLDEVSKAIESKYKVETKTISADFGSVDIYPKIE------SGLAGLEIGVLVNNVGVSYSYPEFFLNIPDVDSFINNMININIMSVCQMTRLVLPRMVDRSKGVILNVASASGMYPVPLLTLYSSTKAFVDFFSRGLDAEYKSKGIIIQSVLPFYVTTKLSK 239          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: DECR_HUMAN (2,4-dienoyl-CoA reductase, mitochondrial OS=Homo sapiens GN=DECR1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.292e-11
Identity = 54/193 (27.98%), Postives = 84/193 (43.52%), Query Frame = 1
Query:  118 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGSVCDVSSRPQRQTLINTVSSLFN--GKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFE-SAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRT 684
            S QG  A +TGG  GLG  +   LS LGA     SR    L      +  + G KV    CDV      Q   NTVS L    G  NI +NN   + + PT   +   +  +       +AF   ++   L++A   A+ + +++      +      ++ K  +  ++K+LA EW K  +R N + P  I+T
Sbjct:   56 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQ---NTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKT 245          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: AYR1_YEAST (NADPH-dependent 1-acyldihydroxyacetone phosphate reductase OS=Saccharomyces cerevisiae GN=AYR1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.688e-11
Identity = 51/174 (29.31%), Postives = 86/174 (49.43%), Query Frame = 1
Query:  136 ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTV-SSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC-QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIR 651
            A+VTG + G+G  V +EL+  G  V+ C+R    + +    +Q     +     D+S   +  T    + ++L +GKL++  NN G S   P L+            N     ++C +L+  L++A G  +IV   S  G+VS   G++YSA+K A++Q A+ L  E    N+R
Sbjct:   12 AVVTGASGGIGYEVTKELARNGYLVYACARRLEPMAQLA--IQFGNDSIKPYKLDISKPEEIVTFSGFLRANLPDGKLDLLYNNAGQSCTFPALDATDAAVEQCFKVNVFGHINMCRELSEFLIKAKG--TIVFTGSLAGVVSFPFGSIYSASKAAIHQYARGLHLEMKPFNVR 181          
The following BLAST results are available for this feature:
BLAST of FC930789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
BACC_BACAM5.801e-1228.71Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
YXBG_BACSU9.894e-1225.91Uncharacterized oxidoreductase yxbG OS=Bacillus su... [more]
Y4VI_RHISN9.894e-1229.63Uncharacterized short-chain type dehydrogenase/red... [more]
FABG_VIBHA9.894e-1226.943-oxoacyl-[acyl-carrier-protein] reductase OS=Vibr... [more]
CBR4_XENLA9.894e-1230.69Carbonyl reductase family member 4 OS=Xenopus laev... [more]
CBR4_DANRE9.894e-1230.65Carbonyl reductase family member 4 OS=Danio rerio ... [more]
DHG2_BACSU1.292e-1128.27Glucose 1-dehydrogenase 2 OS=Bacillus subtilis GN=... [more]
DH12B_DANRE1.292e-1127.59Estradiol 17-beta-dehydrogenase 12-B OS=Danio reri... [more]
DECR_HUMAN1.292e-1127.982,4-dienoyl-CoA reductase, mitochondrial OS=Homo s... [more]
AYR1_YEAST1.688e-1129.31NADPH-dependent 1-acyldihydroxyacetone phosphate r... [more]

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Properties
Property NameValue
Genbank descriptionC34109A10EF PostHarvP1 Citrus clementina cDNA clone C34109A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930789 ID=FC930789; Name=FC930789; organism=Citrus clementina; type=EST; length=696bp
GAAGCAAACTAAGGCAATATAATAGCGGCCAGCAATACTAGAAGAGGAAG
AGACAGAGCAGAGATCAGAATGGCTCAGCCTCAGCAGACAGAGAGCCATA
GCAGGCAAAACAGATGGAGTCTTCAGGGCATGACAGCTCTTGTTACTGGC
GGCACCAAAGGACTCGGGCTTGCTGTTGTAGAGGAACTGTCAATGCTAGG
CGCCACTGTGCATACATGCTCCAGGACTGAAACAGAGCTTAATGAATGTA
TACATCACCTGCAGATGAAAGGTTTGAAAGTCACCGGTTCAGTCTGTGAT
GTATCGTCTCGACCTCAAAGACAGACGCTAATCAACACAGTCTCCTCTCT
GTTTAATGGCAAACTTAACATCTTTGTAAACAATGTTGGAACAAGTGTAC
TAAAGCCAACTCTCGAGTACAATGCTGAAGATTTTTCATTAGTAATGTCT
ACAAATTTCGAGTCTGCCTTCCACTTATGTCAACTTGCACATCCTCTGTT
GAGAGCTTCTGGGGCAGCAAGCATTGTTCTCATGTCTTCAGCACTAGGCA
TTGTATCAGCAAACGTTGGAACCGTCTATTCAGCTACTAAAGGAGCAATG
AATCAACTTGCAAAAAATTTGGCATGTGAGTGGGCAAAAGACAACATAAG
GACCAATTCTGTCGCTCCTTGGTACATCAGAACTCCCTTTACTGAA
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