FC930789

Overview
NameFC930789
Unique NameFC930789
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: UCPA_ECO57 (Oxidoreductase ucpA OS=Escherichia coli O157:H7 GN=ucpA PE=3 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 5.989e-17
Identity = 59/193 (30.57%), Postives = 93/193 (48.19%), Query Frame = 1
Query:  121 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            L G TAL+TG  +G+G  +    +  GA +        E+ +    L  +G + T  V DV         I        G+++I VNN G   L   L+ + +D    +  N +  +++ +   P + A     IV+MSS  G + A+ G T Y+ TK A+  L K+LA E+A+  IR N++ P Y+RTP  E
Sbjct:    4 LTGKTALITGALQGIGEGIARTFARHGANLILLD-ISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEK-EGRIDILVNNAGVCRLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAE 194          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: MTDH_AGABI (NADP-dependent mannitol dehydrogenase OS=Agaricus bisporus GN=mtdH PE=1 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 5.989e-17
Identity = 64/201 (31.84%), Postives = 97/201 (48.26%), Query Frame = 1
Query:  118 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPL-LRASGAASIVL---MSSALGIVSANVGTV----YSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFT 693
            S    T +VTGG +G+GLA    ++  GA V    R+  +  E    +  + G+K     CDVS+       I  + +   G ++  + N G SV+KP  E   EDF  V   N    F+ C+    L L+     SIV+   MSS +   S+  G++    Y+++K A + L K LA EWA   IR N+++P Y+ T  T
Sbjct:    8 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAKDAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL-GAISGLIANAGVSVVKPATELTHEDFKFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQT 207          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: PECR_PONAB (Peroxisomal trans-2-enoyl-CoA reductase OS=Pongo abelii GN=PECR PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.822e-17
Identity = 63/195 (32.31%), Postives = 92/195 (47.18%), Query Frame = 1
Query:  121 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQ-----MKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG---TVYS-ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYI 678
            LQG  A+VTGG  G+G A+V+EL  LG+ V   SR    L      LQ      K  +V    C++ +  +   L+ +   +F GK+N  VNN G   L      +++ +  V+ TN    F++C+  +         SIV +     IVS   G    V+S A +  +  L K+LA EWA   +R N VAP  I
Sbjct:   16 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAAGELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDIF-GKINFLVNNGGGQFLSLAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNI-----IVSIKTGLPLAVHSGAARAGVYNLTKSLALEWACSGVRINCVAPGVI 204          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: UCPA_SALTY (Oxidoreductase ucpA OS=Salmonella typhimurium GN=ucpA PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.276e-16
Identity = 57/193 (29.53%), Postives = 95/193 (49.22%), Query Frame = 1
Query:  121 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            L G TAL+TG ++G+G  +    +  GA +     ++ E+ +    L  +G + T    DV      Q  +        G+++I VNN G   L   L+ + ED    +  N +  +++ +   P +       IV+MSS  G + A+ G T Y+ +K A+  L K+LA E+A+  IR N++ P Y+RTP  E
Sbjct:    4 LTGKTALITGASQGIGEGIARVFARHGANLILLDISD-EIEKLADELGGRGHRCTAVKADVRDFASVQAAVARAKET-EGRIDILVNNAGVCRLGNFLDMSEEDRDFHIDINIKGVWNVTKAVLPEMIKRKDGRIVMMSSVTGDMVADPGETAYALSKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAE 194          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: UCPA_SALTI (Oxidoreductase ucpA OS=Salmonella typhi GN=ucpA PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.276e-16
Identity = 57/193 (29.53%), Postives = 95/193 (49.22%), Query Frame = 1
Query:  121 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            L G TAL+TG ++G+G  +    +  GA +     ++ E+ +    L  +G + T    DV      Q  +        G+++I VNN G   L   L+ + ED    +  N +  +++ +   P +       IV+MSS  G + A+ G T Y+ +K A+  L K+LA E+A+  IR N++ P Y+RTP  E
Sbjct:    4 LTGKTALITGASQGIGEGIARVFARHGANLILLDISD-EIEKLADELGGRGHRCTAVKADVRDFASVQAAVARAKET-EGRIDILVNNAGVCRLGNFLDMSEEDRDFHIDINIKGVWNVTKAVLPEMIKRKDGRIVMMSSVTGDMVADPGETAYALSKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAE 194          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: MTDH_UROFA (Probable NADP-dependent mannitol dehydrogenase OS=Uromyces fabae GN=PIG8 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.276e-16
Identity = 55/196 (28.06%), Postives = 98/196 (50.00%), Query Frame = 1
Query:  121 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG--AASIVLMSSALGIVSANVGT--VYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFT 693
            L+    +VTGG +G+GLA+ +  +  GA V     +  +  +    +  K G+K     CDV  + + + +   ++    G +   + N G SV+K  L+YN +DF+ +   N    F+  Q    +   +G    S+V++SS    +     T   Y+++K A++ L K LA EWA+ +IR N ++P Y++T  T
Sbjct:    7 LKDQCIIVTGGNRGIGLAMSQACADAGAAVGIIYNSAKDAEDRASEISKKYGVKCKAYQCDVGQQHKVKEVFKKINEEL-GPVTGLIANAGVSVVKEALQYNKDDFNKIFDVNVFGVFNCAQAMAQIWTDTGFQRGSVVIISSMSSQICNRPLTQCFYNSSKAAVSNLGKCLAAEWAEKSIRVNMLSPGYVKTDQT 201          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: FABG_HAEIN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Haemophilus influenzae GN=fabG PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.276e-16
Identity = 62/192 (32.29%), Postives = 93/192 (48.44%), Query Frame = 1
Query:  121 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            +QG  ALVTG T+G+G A+ EELS  GA V   + +E        +L  KG    G V +V+ +   +TL+  + + F G ++I VNN G +     +    E++  +M TN  S +HL +     +       I+ + S +G       T Y A K  +   +K+LA E A   I  N VAP +I T  TE
Sbjct:    1 MQGKIALVTGSTRGIGRAIAEELSSKGAFVIGTATSEKGAEAISAYLGDKG---KGLVLNVTDKESIETLLEQIKNDF-GDIDILVNNAGITRDNLLMRMKDEEWFDIMQTNLTSVYHLSKAMLRSMMKKRFGRIINIGSVVGSTGNPGQTNYCAAKAGVVGFSKSLAKEVAARGITVNVVAPGFIATDMTE 188          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: YOXD_BACSU (Uncharacterized oxidoreductase yoxD OS=Bacillus subtilis GN=yoxD PE=3 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 5.070e-16
Identity = 53/184 (28.80%), Postives = 89/184 (48.37%), Query Frame = 1
Query:  118 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAP 669
            SLQ  TAL+TGG +G+G A    L+  G  +    RT   + +    ++  G+K   +  DV    Q    +  V     G ++I +NN G S     L+ +A+++  ++  N    +H+ +   P +    A  I+ +SS  G   A V + YSA+K A+  L ++L  E  K NIR +++ P
Sbjct:    3 SLQHKTALITGGGRGIGRATALALAKEGVNIGLIGRTSANVEKVAEEVKALGVKAAFAAADVKDADQVNQAVAQVKEQL-GDIDILINNAGISKFGGFLDLSADEWENIIQVNLMGVYHVTRAVLPEMIERKAGDIINISSTAGQRGAAVTSAYSASKFAVLGLTESLMQEVRKHNIRVSALTP 185          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: CPNA_COMTE (Cyclopentanol dehydrogenase OS=Comamonas testosteroni GN=cpnA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.070e-16
Identity = 58/186 (31.18%), Postives = 90/186 (48.39%), Query Frame = 1
Query:  139 LVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            LVTGG  G+GL     L+  GATV+     E   ++ +  ++ +G K      DV++       ++T+ +  + +L+  VNN G   LKP  + + E++  +   N  S F   +     +R +    IV +SS  G+V A     Y A+KGA+    K  A + A  NIR NSV P  I TP T+
Sbjct:   10 LVTGGAMGMGLTHCTLLAREGATVYLSDMNEELGHQAVAEIRRQGGKAHFLHLDVTNENHWTGAVDTILAE-SDRLDALVNNAGILTLKPVQDTSNEEWDRIFEINVRSVFLGTRAVIEPMRKAHKGCIVNVSSIYGLVGAPGAAAYEASKGAVRLFTKACAVDLAPFNIRVNSVHPGVIATPMTQ 194          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: CPNA_COMS9 (Cyclopentanol dehydrogenase OS=Comamonas sp. (strain NCIMB 9872) GN=cpnA PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.070e-16
Identity = 58/186 (31.18%), Postives = 90/186 (48.39%), Query Frame = 1
Query:  139 LVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            LVTGG  G+GL     L+  GATV+     E   ++ +  ++ +G K      DV++       ++T+ +  + +L+  VNN G   LKP  + + E++  +   N  S F   +     +R +    IV +SS  G+V A     Y A+KGA+    K  A + A  NIR NSV P  I TP T+
Sbjct:   10 LVTGGAMGMGLTHCTLLAREGATVYLSDMNEELGHQAVAEIRRQGGKAHFLHLDVTNENHWTGAVDTILAE-SDRLDALVNNAGILTLKPVQDTSNEEWDRIFEINVRSVFLGTRAVIEPMRKAHKGCIVNVSSIYGLVGAPGAAAYEASKGAVRLFTKACAVDLAPFNIRVNSVHPGVIATPMTQ 194          
The following BLAST results are available for this feature:
BLAST of FC930789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
UCPA_ECO575.989e-1730.57Oxidoreductase ucpA OS=Escherichia coli O157:H7 GN... [more]
MTDH_AGABI5.989e-1731.84NADP-dependent mannitol dehydrogenase OS=Agaricus ... [more]
PECR_PONAB7.822e-1732.31Peroxisomal trans-2-enoyl-CoA reductase OS=Pongo a... [more]
UCPA_SALTY2.276e-1629.53Oxidoreductase ucpA OS=Salmonella typhimurium GN=u... [more]
UCPA_SALTI2.276e-1629.53Oxidoreductase ucpA OS=Salmonella typhi GN=ucpA PE... [more]
MTDH_UROFA2.276e-1628.06Probable NADP-dependent mannitol dehydrogenase OS=... [more]
FABG_HAEIN2.276e-1632.293-oxoacyl-[acyl-carrier-protein] reductase OS=Haem... [more]
YOXD_BACSU5.070e-1628.80Uncharacterized oxidoreductase yoxD OS=Bacillus su... [more]
CPNA_COMTE5.070e-1631.18Cyclopentanol dehydrogenase OS=Comamonas testoster... [more]
CPNA_COMS95.070e-1631.18Cyclopentanol dehydrogenase OS=Comamonas sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionC34109A10EF PostHarvP1 Citrus clementina cDNA clone C34109A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930789 ID=FC930789; Name=FC930789; organism=Citrus clementina; type=EST; length=696bp
GAAGCAAACTAAGGCAATATAATAGCGGCCAGCAATACTAGAAGAGGAAG
AGACAGAGCAGAGATCAGAATGGCTCAGCCTCAGCAGACAGAGAGCCATA
GCAGGCAAAACAGATGGAGTCTTCAGGGCATGACAGCTCTTGTTACTGGC
GGCACCAAAGGACTCGGGCTTGCTGTTGTAGAGGAACTGTCAATGCTAGG
CGCCACTGTGCATACATGCTCCAGGACTGAAACAGAGCTTAATGAATGTA
TACATCACCTGCAGATGAAAGGTTTGAAAGTCACCGGTTCAGTCTGTGAT
GTATCGTCTCGACCTCAAAGACAGACGCTAATCAACACAGTCTCCTCTCT
GTTTAATGGCAAACTTAACATCTTTGTAAACAATGTTGGAACAAGTGTAC
TAAAGCCAACTCTCGAGTACAATGCTGAAGATTTTTCATTAGTAATGTCT
ACAAATTTCGAGTCTGCCTTCCACTTATGTCAACTTGCACATCCTCTGTT
GAGAGCTTCTGGGGCAGCAAGCATTGTTCTCATGTCTTCAGCACTAGGCA
TTGTATCAGCAAACGTTGGAACCGTCTATTCAGCTACTAAAGGAGCAATG
AATCAACTTGCAAAAAATTTGGCATGTGAGTGGGCAAAAGACAACATAAG
GACCAATTCTGTCGCTCCTTGGTACATCAGAACTCCCTTTACTGAA
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