FC930789

Overview
NameFC930789
Unique NameFC930789
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: DHB8_HUMAN (Estradiol 17-beta-dehydrogenase 8 OS=Homo sapiens GN=HSD17B8 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 8.094e-14
Identity = 66/206 (32.04%), Postives = 98/206 (47.57%), Query Frame = 1
Query:  106 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKV-------TGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGA-ASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            QNR  L+   ALVTG   G+G AV   L+  GATV  C        E +  L   G K             DVS     + L+  V + F+   ++ V+  G +  +  L  + +D+  V++ N +  F + Q A   L ++G   SI+ +SS +G V  NVG T Y+A+K  +  L +  A E  +  IR NSV P +I TP T+
Sbjct:    6 QNR--LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVG-NVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQ 208          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: Y1385_MYCBO (Uncharacterized oxidoreductase Mb1385 OS=Mycobacterium bovis GN=fabG2 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.057e-13
Identity = 63/193 (32.64%), Postives = 91/193 (47.15%), Query Frame = 1
Query:  121 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV-CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            L   TA++TGG +GLGLA+ +     GA V        E  E +   ++ G  V  +V CDV+       LI T    F G L++ VNN G +          E F  V++ + +  ++  +LA  ++R     +IV MSS  G V     T YSA K  +  + K  A E A   IR N++AP  IR+  TE
Sbjct:    5 LNARTAVITGGAQGLGLAIGQRFVAEGARV-VLGDVNLEATE-VAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGG-LDVMVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGKVGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTE 194          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: Y1350_MYCTU (Uncharacterized oxidoreductase Rv1350/MT1393 OS=Mycobacterium tuberculosis GN=fabG2 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.057e-13
Identity = 63/193 (32.64%), Postives = 91/193 (47.15%), Query Frame = 1
Query:  121 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV-CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            L   TA++TGG +GLGLA+ +     GA V        E  E +   ++ G  V  +V CDV+       LI T    F G L++ VNN G +          E F  V++ + +  ++  +LA  ++R     +IV MSS  G V     T YSA K  +  + K  A E A   IR N++AP  IR+  TE
Sbjct:    5 LNARTAVITGGAQGLGLAIGQRFVAEGARV-VLGDVNLEATE-VAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGG-LDVMVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGKVGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTE 194          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: SOU2_CANAL (Sorbose reductase homolog SOU2 OS=Candida albicans GN=SOU2 PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.057e-13
Identity = 56/198 (28.28%), Postives = 99/198 (50.00%), Query Frame = 1
Query:  115 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLK-PTLEYNAED-FSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSS-ALGIVSA-NVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            +SL+G  A VTG + G+G AV E  +  GA V     +    ++  +  +  G+K     C+V+     + ++  + S F G ++IFV N G +  + P ++    D ++ V+  +  S ++   +  P+ R  G  S +  +S +  IV+   +   Y+A K  +  L+K+L+ EWA    R NSV+P YI T  +E
Sbjct:   31 FSLKGKVASVTGSSGGIGWAVAEGYAQAGADVAIWYNSHPADDKAEYLTKTYGVKSKAYKCNVTDFQDVEKVVKQIESDF-GTIDIFVANAGVAWTEGPEIDVKGVDKWNKVVDVDLNSVYYCAHVVGPIFRKKGKGSFIFTASMSASIVNVPQLQAAYNAAKAGVKHLSKSLSVEWA-PFARVNSVSPGYIATHLSE 226          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: IDNO_ECOLI (Gluconate 5-dehydrogenase OS=Escherichia coli (strain K12) GN=idnO PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.057e-13
Identity = 51/197 (25.89%), Postives = 94/197 (47.72%), Query Frame = 1
Query:  115 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLA--HPLLRASGAA-SIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            +SL G   L+TG  +G+G  +   L   GA +     T       +  L  +G++   +  +V+ + +    +  +     G +++ VNN G     P  E+  ++++ V++ N  + F + Q    H + R +G   +I  M S LG    +  T Y+A+KGA+  L + +  E A+ NI+ N +AP Y +T  T+
Sbjct:    5 FSLAGKNILITGSAQGIGFLLATGLGKYGAQIIINDITAERAELAVEKLHQEGIQAVAAPFNVTHKHEIDAAVEHIEKDI-GPIDVLVNNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVTRHMVERKAGKVINICSMQSELG---RDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTK 197          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: IDNO_ECOL6 (Gluconate 5-dehydrogenase OS=Escherichia coli O6 GN=idnO PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.057e-13
Identity = 51/197 (25.89%), Postives = 94/197 (47.72%), Query Frame = 1
Query:  115 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLA--HPLLRASGAA-SIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            +SL G   L+TG  +G+G  +   L   GA +     T       +  L  +G++   +  +V+ + +    +  +     G +++ VNN G     P  E+  ++++ V++ N  + F + Q    H + R +G   +I  M S LG    +  T Y+A+KGA+  L + +  E A+ NI+ N +AP Y +T  T+
Sbjct:    5 FSLAGKNILITGSAQGIGFLLATGLGKYGAQIIINDITAERAELAVEKLHQEGIQAVAAPFNVTHKHEIDAAVEHIEKDI-GPIDVLVNNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVTRHMVERKAGKVINICSMQSELG---RDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTK 197          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: DHRS2_HUMAN (Dehydrogenase/reductase SDR family member 2 OS=Homo sapiens GN=DHRS2 PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.057e-13
Identity = 60/194 (30.93%), Postives = 95/194 (48.97%), Query Frame = 1
Query:  121 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTS-VLKPTLEYNAEDFSLVMSTNFES-AFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            L    A+VTG T G+G A+   L+  GA V   SR +  ++  +  LQ +GL V G VC V     R+ L+        G ++  V + G + ++  TL  + + +  ++S N +S A  L QL   +    GA  ++L+SS           VY+ +K A+  L + LA E A  +IR N V P  I+T F++
Sbjct:   12 LANRVAVVTGSTSGIGFAIARRLARDGAHVVISSRKQQNVDRAMAKLQGEGLSVAGIVCHVGKAEDREQLVAKALEHCGG-VDFLVCSAGVNPLVGSTLGTSEQIWDKILSVNVKSPALLLSQLLPYMENRRGA--VILVSSIAAYNPVVALGVYNVSKTALLGLTRTLALELAPKDIRVNCVVPGIIKTDFSK 202          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: CBR2_PIG (Carbonyl reductase [NADPH] 2 OS=Sus scrofa GN=CBR2 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.057e-13
Identity = 59/191 (30.89%), Postives = 92/191 (48.17%), Query Frame = 1
Query:  118 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC-DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQL-AHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRT 684
            +  G+ ALVTG  KG+G   V+ L + GA V   +RT  +L       +  G++    VC D+      +  +  V     G +++ VNN   ++++P L+   E F    + N  S F + Q+ A  ++      SIV +SS +  V+      YS+TKGAM  L K++A E     IR NSV P  + T
Sbjct:    4 NFSGLRALVTGAGKGIGRDTVKALHVSGARVVAVTRTNGDLVSLSQ--ECPGIE---PVCVDLGDWEATERALGGV-----GPVDLLVNNAAVALMQPFLDTTKEVFDRSFNVNLRSVFQVSQIVARSMIERGVPGSIVNVSSMVSHVTYPGLAAYSSTKGAMTMLTKSMAMELGPHKIRVNSVNPTVVLT 184          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: ARDH_PICST (D-arabinitol 2-dehydrogenase [ribulose-forming] OS=Pichia stipitis GN=ARDH PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.057e-13
Identity = 56/207 (27.05%), Postives = 94/207 (45.41%), Query Frame = 1
Query:  121 LQGMTALVTGGTKGLGLAVVEELSMLGATVH----TCSRTETELNECI---------HHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQ-LAHPLLRASGAASIVLMSSALGIV--SANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFT 693
            L G  A++TGG+ GL   +   L   GA V        RT++   E +          H    G +V+   C++          ++++       ++ +N  G     P   Y A +   +M  N   +F++ Q  A PL++ +   SI+L+ S  G +        +Y+ +K  +  L ++LACEWAK NIR N+++P YI TP T
Sbjct:   14 LDGRLAIITGGSGGLAAVISRALLAQGADVALIDMNLERTKSAAKEVLGWGEETLKGEHASAIG-QVSAWSCNIGDAEAVDATFSSINEHHGKIADLLINTAGYCENFPAETYPATNAESIMKVNGLGSFYVSQSFARPLIQNNLRGSIILIGSMSGTIVNDPQPQCMYNMSKAGVIHLVRSLACEWAKYNIRVNTLSPGYILTPLT 219          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: SOU1_CANAL (Sorbose reductase SOU1 OS=Candida albicans GN=SOU1 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.381e-13
Identity = 52/198 (26.26%), Postives = 93/198 (46.97%), Query Frame = 1
Query:  115 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLK-PTLEYNAED-FSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVS--ANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            +SL+G  A VTG + G+G AV E  +  GA V     ++    +  +  +  G+K     C+V+       +IN +   F G ++IFV N G +    P ++    D +  ++  +    ++       + + + + S+++ SS  G +     +   Y+A K A   LAK+L+ EWA    R NS++P YI T   +
Sbjct:   31 FSLKGKVASVTGSSGGIGWAVAEAFAQAGADVAIWYNSKPADAKAEYLTEKYGVKAKAYKCNVTDPNDVSKVINEIEKDF-GTIDIFVANAGVAWTDGPEIDVQGYDQWKKIVDCDLNGVYYCAHTVGQIFKKNKSGSLIITSSMSGTIVNIPQLQAPYNAAKAACTHLAKSLSVEWASFGARVNSISPGYILTDIAD 227          
The following BLAST results are available for this feature:
BLAST of FC930789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
DHB8_HUMAN8.094e-1432.04Estradiol 17-beta-dehydrogenase 8 OS=Homo sapiens ... [more]
Y1385_MYCBO1.057e-1332.64Uncharacterized oxidoreductase Mb1385 OS=Mycobacte... [more]
Y1350_MYCTU1.057e-1332.64Uncharacterized oxidoreductase Rv1350/MT1393 OS=My... [more]
SOU2_CANAL1.057e-1328.28Sorbose reductase homolog SOU2 OS=Candida albicans... [more]
IDNO_ECOLI1.057e-1325.89Gluconate 5-dehydrogenase OS=Escherichia coli (str... [more]
IDNO_ECOL61.057e-1325.89Gluconate 5-dehydrogenase OS=Escherichia coli O6 G... [more]
DHRS2_HUMAN1.057e-1330.93Dehydrogenase/reductase SDR family member 2 OS=Hom... [more]
CBR2_PIG1.057e-1330.89Carbonyl reductase [NADPH] 2 OS=Sus scrofa GN=CBR2... [more]
ARDH_PICST1.057e-1327.05D-arabinitol 2-dehydrogenase [ribulose-forming] OS... [more]
SOU1_CANAL1.381e-1326.26Sorbose reductase SOU1 OS=Candida albicans GN=SOU1... [more]

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Properties
Property NameValue
Genbank descriptionC34109A10EF PostHarvP1 Citrus clementina cDNA clone C34109A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930789 ID=FC930789; Name=FC930789; organism=Citrus clementina; type=EST; length=696bp
GAAGCAAACTAAGGCAATATAATAGCGGCCAGCAATACTAGAAGAGGAAG
AGACAGAGCAGAGATCAGAATGGCTCAGCCTCAGCAGACAGAGAGCCATA
GCAGGCAAAACAGATGGAGTCTTCAGGGCATGACAGCTCTTGTTACTGGC
GGCACCAAAGGACTCGGGCTTGCTGTTGTAGAGGAACTGTCAATGCTAGG
CGCCACTGTGCATACATGCTCCAGGACTGAAACAGAGCTTAATGAATGTA
TACATCACCTGCAGATGAAAGGTTTGAAAGTCACCGGTTCAGTCTGTGAT
GTATCGTCTCGACCTCAAAGACAGACGCTAATCAACACAGTCTCCTCTCT
GTTTAATGGCAAACTTAACATCTTTGTAAACAATGTTGGAACAAGTGTAC
TAAAGCCAACTCTCGAGTACAATGCTGAAGATTTTTCATTAGTAATGTCT
ACAAATTTCGAGTCTGCCTTCCACTTATGTCAACTTGCACATCCTCTGTT
GAGAGCTTCTGGGGCAGCAAGCATTGTTCTCATGTCTTCAGCACTAGGCA
TTGTATCAGCAAACGTTGGAACCGTCTATTCAGCTACTAAAGGAGCAATG
AATCAACTTGCAAAAAATTTGGCATGTGAGTGGGCAAAAGACAACATAAG
GACCAATTCTGTCGCTCCTTGGTACATCAGAACTCCCTTTACTGAA
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