FC930792
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930792 vs. ExPASy Swiss-Prot
Match: ACTT1_MOUSE (Actin-related protein T1 OS=Mus musculus GN=Actrt1 PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 4.994e-47 Identity = 95/181 (52.49%), Postives = 121/181 (66.85%), Query Frame = 2 Query: 119 DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 661 D ++ DNG+G+ K G +G+ PR V S+VG P+ +K +VG+EAQ L L YPIE G+V+ WDDMEK+W F EL V P E PV +TE LNP+ REK T+IMFE FNVPA+Y+ AV +L AS TG+VLDSGDGV+ TVP+YEGY+LPHAI +L +AGRD Sbjct: 8 DNPAVIFDNGSGLCKVGISGEIEPRHVINSVVGHPKFNIPSARSNRKRYFVGEEAQCMYDGLYLHYPIERGLVTRWDDMEKLWKDLFEWELGVKPNEQPVFMTEPSLNPQETREKTTEIMFEKFNVPALYLCNHAVGALCASACITGLVLDSGDGVTCTVPVYEGYSLPHAITKLYVAGRD 188
BLAST of FC930792 vs. ExPASy Swiss-Prot
Match: ARPM1_HUMAN (Actin-related protein M1 OS=Homo sapiens GN=ARPM1 PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.112e-46 Identity = 87/178 (48.88%), Postives = 128/178 (71.91%), Query Frame = 2 Query: 128 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 661 P+V DNG+GM+KAG AG P+ ++P+I+GR + G + VGD+AQ R L + YP+E G++++W+DME +W H + L++ P + PVL+TE LNP ANR+++T++ FE VPA Y++IQAVL+L+A+G TTG+VL+SG GV+ +VPI+EGY LPH + +LDLAG D Sbjct: 7 PVVIDNGSGMIKAGVAGCREPQFIYPNIIGRAKGQS-RAAQGGLELCVGDQAQDWRSSLFISYPVERGLITSWEDMEIMWKHIYDYNLKLKPCDGPVLITEPALNPLANRQQITEMFFEHLGVPAFYMSIQAVLALFAAGFTTGLVLNSGAGVTQSVPIFEGYCLPHGVQQLDLAGLD 183
BLAST of FC930792 vs. ExPASy Swiss-Prot
Match: ACTT1_RAT (Actin-related protein T1 OS=Rattus norvegicus GN=Actrt1 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 1.898e-46 Identity = 95/181 (52.49%), Postives = 120/181 (66.30%), Query Frame = 2 Query: 119 DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 661 D ++ DNG+G+ K G +G+ PR V S+VG P+ +K +VG+EAQ L L YPIE G+V+ WDDMEK+W F EL V P E PV +TE LNP+ REK T+IMFE FNVPA+Y+ AV +L AS TG+VLDSGDGV+ TVPIYEGY+LP AI +L +AGRD Sbjct: 8 DNPAVIFDNGSGLCKVGISGEIVPRHVINSVVGHPKFNIPSARSNRKRYFVGEEAQCMYDGLYLHYPIERGLVTRWDDMEKLWKDLFEWELGVKPNEQPVFMTEPSLNPRETREKTTEIMFEKFNVPALYLCNHAVGALCASACITGLVLDSGDGVTCTVPIYEGYSLPRAITKLYVAGRD 188
BLAST of FC930792 vs. ExPASy Swiss-Prot
Match: ARP2_YEAST (Actin-related protein 2 OS=Saccharomyces cerevisiae GN=ARP2 PE=1 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.478e-46 Identity = 90/182 (49.45%), Postives = 121/182 (66.48%), Query Frame = 2 Query: 128 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP---RHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEH-PVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 661 P+V D GTG VK G AG++ P FPSIVGRP V KD +GDEA R L + YP+E+GI+ NW DME +W + F+ ++++ + +LLTE P+NP NREKM ++MFE ++ +YVAIQAVL+LYA G ++G+V+DSGDGV+H VP+YE L H RLD+AGRD Sbjct: 6 PIVLDQGTGFVKIGRAGENFPDYTFPSIVGRPILRAEERASVATPLKDIMIGDEASEVRSYLQISYPMENGIIKNWTDMELLWDYAFFEQMKLPSTSNGKILLTEPPMNPLKNREKMCEVMFEKYDFGGVYVAIQAVLALYAQGLSSGVVVDSGDGVTHIVPVYESVVLSHLTRRLDVAGRD 187
BLAST of FC930792 vs. ExPASy Swiss-Prot
Match: ACTT1_MACFA (Actin-related protein T1 OS=Macaca fascicularis GN=ACTRT1 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.320e-44 Identity = 88/181 (48.62%), Postives = 121/181 (66.85%), Query Frame = 2 Query: 119 DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 661 D+ ++ DNG+G+ KAG +G+ PR V S++G + + Q +VG EA K L L YPI+ G+V+ WDDMEK+W H F EL V P + PVL+TE LNP+ REK+ ++MFE F+VP Y++ AV +LYAS TG+V+DSGDGV+ VPI+EGY+LPHA+ +L AGRD Sbjct: 8 DVPAVIFDNGSGLCKAGVSGEIGPRHVINSVLGHRKFNMPSARLNQY--FVGQEALYKFDALHLHYPIKRGLVTGWDDMEKLWKHLFEWELGVKPSQQPVLMTEPSLNPREIREKLAEMMFENFSVPGFYLSNHAVAALYASACVTGLVVDSGDGVTCAVPIFEGYSLPHAVTKLYTAGRD 186
BLAST of FC930792 vs. ExPASy Swiss-Prot
Match: ACT_CHERU (Actin (Fragment) OS=Chenopodium rubrum PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.151e-43 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 2 Query: 359 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 613 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG Sbjct: 1 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 85
BLAST of FC930792 vs. ExPASy Swiss-Prot
Match: ARPM1_MOUSE (Actin-related protein M1 homolog OS=Mus musculus GN=Arpm1 PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.504e-43 Identity = 82/179 (45.81%), Postives = 126/179 (70.39%), Query Frame = 2 Query: 128 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPR-HTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 661 P+V DNG+GM+KAG AG P+ V+P+I+GR + HT +++ VGD+AQ +R L++ YP+E G++S+W DME +W H + L + + PVL+TE LNP A+R+ ++++ FE VPA Y++ QAVL+L+A+G TTG+VL+SG G++ VPI+EGY L H + +L++AG D Sbjct: 7 PVVIDNGSGMIKAGLAGTREPQFVYPNILGRSKGHTAD----SRQELCVGDQAQERRSFLSISYPVERGLISSWGDMEIMWKHIYDYNLNLNASDGPVLVTEPALNPLADRQHISEVFFENLGVPAFYMSAQAVLALFAAGFTTGLVLNSGAGITQCVPIFEGYCLSHGVKQLNVAGSD 181
BLAST of FC930792 vs. ExPASy Swiss-Prot
Match: ACL7A_MACFA (Actin-like protein 7A OS=Macaca fascicularis GN=ACTL7A PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 3.703e-42 Identity = 82/182 (45.05%), Postives = 117/182 (64.29%), Query Frame = 2 Query: 116 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 661 E + +V D GTG K GFAG P ++VG+P G +K+ +VG E + L L P+ HGI+ +WD ++ IW + F E+++APEEH VL+++ PL+P NREK +++FE FN PAM++A Q+ LS+Y+ GRT+G+V++ G GVS+ VPIYEGY LP RLD AG D Sbjct: 67 EVTKAVVVDLGTGYCKCGFAGLPRPTHKISTMVGKPYMETAKTGDNRKETFVGQELNNTNVHLKLVNPLRHGIIVDWDTVQDIWEYLFRQEMKIAPEEHAVLVSDPPLSPHTNREKYAEMLFEAFNTPAMHIAYQSRLSMYSYGRTSGLVVEVGHGVSYVVPIYEGYPLPSITGRLDYAGSD 248
BLAST of FC930792 vs. ExPASy Swiss-Prot
Match: ACL7A_HUMAN (Actin-like protein 7A OS=Homo sapiens GN=ACTL7A PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 6.317e-42 Identity = 82/182 (45.05%), Postives = 116/182 (63.74%), Query Frame = 2 Query: 116 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 661 E + +V D GTG K GFAG P + VG+P G +K+ +VG E + L L P+ HGI+ +WD ++ IW + F E+++APEEH VL+++ PL+P NREK +++FE FN PAM++A Q+ LS+Y+ GRT+G+V++ G GVS+ VPIYEGY LP RLD AG D Sbjct: 67 EVTKAVVVDLGTGYCKCGFAGLPRPTHKISTTVGKPYMETAKTGDNRKETFVGQELNNTNVHLKLVNPLRHGIIVDWDTVQDIWEYLFRQEMKIAPEEHAVLVSDPPLSPHTNREKYAEMLFEAFNTPAMHIAYQSRLSMYSYGRTSGLVVEVGHGVSYVVPIYEGYPLPSITGRLDYAGSD 248
BLAST of FC930792 vs. ExPASy Swiss-Prot
Match: ACL7A_MOUSE (Actin-like protein 7A OS=Mus musculus GN=Actl7a PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 8.250e-42 Identity = 83/182 (45.60%), Postives = 117/182 (64.29%), Query Frame = 2 Query: 116 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 661 E + +V D GTG K GFAG P + VG+P G +K+ +VG E + L L P+ HGI+ +WD ++ IW + F E+++APEEH VL+++ PL+P NREK +++FETFN PAM++A Q+ LS+Y+ GRT+G+V++ G GVS+ VPIYEGY LP RLD AG D Sbjct: 72 EVTKAVVVDLGTGFCKCGFAGLPKPTHKISTTVGKPYMETAKTGDNRKETFVGHELFNPDIHLKLVNPLRHGIIVDWDTVQDIWEYLFRQEMKIAPEEHAVLVSDPPLSPHTNREKYAEMLFETFNTPAMHIAYQSRLSMYSYGRTSGLVVEVGHGVSYVVPIYEGYPLPSITGRLDYAGSD 253 The following BLAST results are available for this feature:
BLAST of FC930792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 471
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930792 ID=FC930792; Name=FC930792; organism=Citrus clementina; type=EST; length=663bpback to top |