FC930792
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930792 vs. ExPASy Swiss-Prot
Match: ARP3_CAEBR (Actin-related protein 3 OS=Caenorhabditis briggsae GN=arx-1 PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.115e-38 Identity = 85/198 (42.93%), Postives = 116/198 (58.59%), Query Frame = 2 Query: 134 VCDNGTGMVKAGFAGDDAPRAVFPSIVG-------------RPRHTGVMVGMGQKDAYVGDEAQSKRGI-LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 661 V DNGTG K G+AG+ P+ + PS + R + G+ D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN NRE +IMFE+FNVP +Y+A+QAVL+L AS ++ TG+V+DSGDGV+H +P+ +GY + I + +AGRD Sbjct: 10 VIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNAQALRWNNRVGGAGIDDLDFFIGDEALSPAASNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWQSREASDRSLTGLVIDSGDGVTHCIPVADGYVIGSCIKHIPIAGRD 207
BLAST of FC930792 vs. ExPASy Swiss-Prot
Match: ARP3_ACACA (Actin-related protein 3 OS=Acanthamoeba castellanii GN=ARP3 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.484e-38 Identity = 83/199 (41.71%), Postives = 112/199 (56.28%), Query Frame = 2 Query: 131 LVCDNGTGMVKAGFAGDDAPRAVFPSIVG----------RPRHTGVMVGMGQK----DAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 661 +V DNGTG K G+AG+ P+ + P+ + R R G+ D ++GDEA + + P+ HG V NW ME+ W H + LR PE+H LLTE PLN NRE +IMFETFNVP +Y+A+QAVL+L AS + TG V+DSGDGV+H +P+ EGY + +I + LAGRD Sbjct: 9 VVIDNGTGYTKMGYAGNTEPQYIIPTAIATKGIAEDPRCRARRWWCPWAAGKNIADLDFFIGDEAYENSKVYQITMPVRHGQVENWTHMEQFWEHCIFKYLRCEPEDHHFLLTEPPLNAPENREYTAEIMFETFNVPGLYIAVQAVLALAASWTSKQVTEKTLTGTVIDSGDGVTHVIPVAEGYVIGSSIKHIPLAGRD 207
BLAST of FC930792 vs. ExPASy Swiss-Prot
Match: ARP3B_MOUSE (Actin-related protein 3B OS=Mus musculus GN=Actr3b PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.484e-38 Identity = 85/199 (42.71%), Postives = 116/199 (58.29%), Query Frame = 2 Query: 113 AEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVG--------RPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 661 A + P V D GTG K G+AG+ P+ + PS + V+ G+ D ++GDEA K T K+PI HGIV +WD ME+ + LR PE+H L+TE PLN NRE + +IMFE+FNVP +Y+A+QAVL+L AS + TGIV+DSGDGV+H +P+ EGY + I + +AGRD Sbjct: 2 AGSLPPCVVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDFFIGDEAIDKPTYAT-KWPIRHGIVEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 199
BLAST of FC930792 vs. ExPASy Swiss-Prot
Match: ACL7B_BOVIN (Actin-like protein 7B OS=Bos taurus GN=ACTL7B PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.484e-38 Identity = 76/180 (42.22%), Postives = 115/180 (63.89%), Query Frame = 2 Query: 122 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 661 I+ L+ D G+ K G+AG+ P S VG+ G +K+ YVG E + L L P+++GIV +WD ++ IW + F+ +++ PEEH VL+++ PL+P +NREK +++FETF +PAM+V Q++LS+Y+ G+T+G+V++SG GVSH VPI EG LP R D AG D Sbjct: 51 IKALITDLGSQYCKCGYAGEPRPTYFISSTVGKRYSEAADSGDTRKETYVGHELLNMEAPLKLINPLKYGIVVDWDCIQSIWEYIFHTAMKILPEEHAVLVSDPPLSPTSNREKYAELLFETFGIPAMHVTSQSLLSIYSYGKTSGLVVESGHGVSHVVPISEGDVLPGLTSRADYAGGD 230
BLAST of FC930792 vs. ExPASy Swiss-Prot
Match: ARP3B_HUMAN (Actin-related protein 3B OS=Homo sapiens GN=ACTR3B PE=1 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.244e-38 Identity = 84/199 (42.21%), Postives = 116/199 (58.29%), Query Frame = 2 Query: 113 AEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVG--------RPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 661 A + P V D GTG K G+AG+ P+ + PS + V+ G+ D ++GDEA K T K+PI HGI+ +WD ME+ + LR PE+H L+TE PLN NRE + +IMFE+FNVP +Y+A+QAVL+L AS + TGIV+DSGDGV+H +P+ EGY + I + +AGRD Sbjct: 2 AGSLPPCVVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDFFIGDEAIDKPTYAT-KWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 199
BLAST of FC930792 vs. ExPASy Swiss-Prot
Match: ARP3_NEUCR (Actin-related protein 3 OS=Neurospora crassa GN=arp-3 PE=2 SV=2) HSP 1 Score: 157.918 bits (398), Expect = 4.237e-38 Identity = 88/217 (40.55%), Postives = 117/217 (53.92%), Query Frame = 2 Query: 131 LVCDNGTGMVKAGFAGDDAPRAVFPSIV--------------GRPR----------------HTGVMVGMGQKDAYVGDEAQSKRGI--LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 661 +V DNGTG K GFAG+D+P VFP+ + GRP H G D ++GDEA + L YPI HG + NWD ME+ W ++ + LRV PE+H LLTE PLNP NRE +I FE+FN +Y+A+QAVL+L AS + TG V+DSGDGV+H +P+ EGY + +I + +AGRD Sbjct: 8 VVMDNGTGFSKLGFAGNDSPSFVFPTAIATKSPSAGTGGSGSGRPAVANKPSFLTGGAGPGGHLSAKRGTEDLDYFIGDEAVAAANGPGYGLHYPIRHGQIENWDHMERFWSNSIFKYLRVEPEDHHFLLTEPPLNPPENRENTAEIFFESFNCAGLYIAVQAVLALAASWTSSKVQDRSLTGTVIDSGDGVTHVIPVAEGYVIGSSIKSIPIAGRD 224
BLAST of FC930792 vs. ExPASy Swiss-Prot
Match: ARP3_RAT (Actin-related protein 3 OS=Rattus norvegicus GN=Actr3 PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 5.534e-38 Identity = 86/192 (44.79%), Postives = 112/192 (58.33%), Query Frame = 2 Query: 134 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 661 V D GTG K G+AG+ P+ + PS VG VM G+ D ++GDEA K T K+PI HGIV +WD ME+ + LR PE+H LLTE PLN NRE +IMFE+FNVP +Y+A+QAVL+L AS + TG V+DSGDGV+H +P+ EGY + I + +AGRD Sbjct: 9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKPTYAT-KWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 199
BLAST of FC930792 vs. ExPASy Swiss-Prot
Match: ARP3_PONAB (Actin-related protein 3 OS=Pongo abelii GN=ACTR3 PE=2 SV=3) HSP 1 Score: 157.532 bits (397), Expect = 5.534e-38 Identity = 86/192 (44.79%), Postives = 112/192 (58.33%), Query Frame = 2 Query: 134 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 661 V D GTG K G+AG+ P+ + PS VG VM G+ D ++GDEA K T K+PI HGIV +WD ME+ + LR PE+H LLTE PLN NRE +IMFE+FNVP +Y+A+QAVL+L AS + TG V+DSGDGV+H +P+ EGY + I + +AGRD Sbjct: 9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKPTYAT-KWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 199
BLAST of FC930792 vs. ExPASy Swiss-Prot
Match: ARP3_MOUSE (Actin-related protein 3 OS=Mus musculus GN=Actr3 PE=1 SV=3) HSP 1 Score: 157.532 bits (397), Expect = 5.534e-38 Identity = 86/192 (44.79%), Postives = 112/192 (58.33%), Query Frame = 2 Query: 134 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 661 V D GTG K G+AG+ P+ + PS VG VM G+ D ++GDEA K T K+PI HGIV +WD ME+ + LR PE+H LLTE PLN NRE +IMFE+FNVP +Y+A+QAVL+L AS + TG V+DSGDGV+H +P+ EGY + I + +AGRD Sbjct: 9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKPTYAT-KWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 199
BLAST of FC930792 vs. ExPASy Swiss-Prot
Match: ARP3_HUMAN (Actin-related protein 3 OS=Homo sapiens GN=ACTR3 PE=1 SV=3) HSP 1 Score: 157.532 bits (397), Expect = 5.534e-38 Identity = 86/192 (44.79%), Postives = 112/192 (58.33%), Query Frame = 2 Query: 134 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 661 V D GTG K G+AG+ P+ + PS VG VM G+ D ++GDEA K T K+PI HGIV +WD ME+ + LR PE+H LLTE PLN NRE +IMFE+FNVP +Y+A+QAVL+L AS + TG V+DSGDGV+H +P+ EGY + I + +AGRD Sbjct: 9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKPTYAT-KWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 199 The following BLAST results are available for this feature:
BLAST of FC930792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 471
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930792 ID=FC930792; Name=FC930792; organism=Citrus clementina; type=EST; length=663bpback to top |