FC930796

Overview
NameFC930796
Unique NameFC930796
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length674
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: PRPS1_HUMAN (Ribose-phosphate pyrophosphokinase 1 OS=Homo sapiens GN=PRPS1 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 8.347e-13
Identity = 38/69 (55.07%), Postives = 53/69 (76.81%), Query Frame = 1
Query:  466 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            IK+FSG+++  LSQ+IA  +G+ELGK+  K+F++ E  V++ ESVRG DVY+VQ  C   N+NLMELLI
Sbjct:    4 IKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCGEINDNLMELLI 72          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: PRPS1_BOVIN (Ribose-phosphate pyrophosphokinase 1 OS=Bos taurus GN=PRPS1 PE=2 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 8.347e-13
Identity = 38/69 (55.07%), Postives = 53/69 (76.81%), Query Frame = 1
Query:  466 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            IK+FSG+++  LSQ+IA  +G+ELGK+  K+F++ E  V++ ESVRG DVY+VQ  C   N+NLMELLI
Sbjct:    4 IKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCGEINDNLMELLI 72          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_BAUCH (Ribose-phosphate pyrophosphokinase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=prs PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.347e-13
Identity = 35/69 (50.72%), Postives = 50/69 (72.46%), Query Frame = 1
Query:  466 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            +KLF+G A P L+Q IA  +   LG   + RF+DGEI VQ+ E+VRG D++++Q TC P N+NLMEL++
Sbjct:    1 MKLFAGNAIPELAQLIANRLYTSLGVAAVNRFSDGEISVQINENVRGGDLFIIQSTCAPTNDNLMELVV 69          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_AGRT5 (Ribose-phosphate pyrophosphokinase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=prs PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 8.347e-13
Identity = 35/69 (50.72%), Postives = 51/69 (73.91%), Query Frame = 1
Query:  466 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            +K+F+G +N  L++ I  Y+ V LG   +KRFAD EI+V++ E+VRG DV++VQ T  P N++LMELLI
Sbjct:    1 MKVFAGNSNRHLAEAICKYLNVPLGNATVKRFADQEIFVEISENVRGEDVFIVQSTSFPANDHLMELLI 69          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS1_STRP8 (Ribose-phosphate pyrophosphokinase 1 OS=Streptococcus pyogenes serotype M18 GN=prs1 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.347e-13
Identity = 32/69 (46.38%), Postives = 54/69 (78.26%), Query Frame = 1
Query:  466 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            +KLF+ ++N  L++++A  MG++LGK  +++F+DGEI V ++ES+RG  V+++Q T  P N+NLME+LI
Sbjct:    6 LKLFALSSNKELAEKVASAMGIQLGKSTVRQFSDGEIQVNIEESIRGHHVFILQSTSSPVNDNLMEILI 74          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS1_STRP6 (Ribose-phosphate pyrophosphokinase 1 OS=Streptococcus pyogenes serotype M6 GN=prs1 PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 8.347e-13
Identity = 32/69 (46.38%), Postives = 54/69 (78.26%), Query Frame = 1
Query:  466 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            +KLF+ ++N  L++++A  MG++LGK  +++F+DGEI V ++ES+RG  V+++Q T  P N+NLME+LI
Sbjct:    6 LKLFALSSNKELAEKVASAMGIQLGKSTVRQFSDGEIQVNIEESIRGHHVFILQSTSSPVNDNLMEILI 74          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS1_STRP3 (Ribose-phosphate pyrophosphokinase 1 OS=Streptococcus pyogenes serotype M3 GN=prs1 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.347e-13
Identity = 32/69 (46.38%), Postives = 54/69 (78.26%), Query Frame = 1
Query:  466 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            +KLF+ ++N  L++++A  MG++LGK  +++F+DGEI V ++ES+RG  V+++Q T  P N+NLME+LI
Sbjct:    6 LKLFALSSNKELAEKVASAMGIQLGKSTVRQFSDGEIQVNIEESIRGHHVFILQSTSSPVNDNLMEILI 74          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS1_STRP1 (Ribose-phosphate pyrophosphokinase 1 OS=Streptococcus pyogenes serotype M1 GN=prs1 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.347e-13
Identity = 32/69 (46.38%), Postives = 54/69 (78.26%), Query Frame = 1
Query:  466 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            +KLF+ ++N  L++++A  MG++LGK  +++F+DGEI V ++ES+RG  V+++Q T  P N+NLME+LI
Sbjct:    6 LKLFALSSNKELAEKVASAMGIQLGKSTVRQFSDGEIQVNIEESIRGHHVFILQSTSSPVNDNLMEILI 74          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_BUCAP (Ribose-phosphate pyrophosphokinase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=prs PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.090e-12
Identity = 33/69 (47.83%), Postives = 51/69 (73.91%), Query Frame = 1
Query:  466 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            +KLF+G + P L++ IA  + + LG   + RF+DGEI VQ+ E+VRG DV+++Q TC P N+N+MEL++
Sbjct:    4 MKLFAGNSIPKLAKFIAHRLYINLGNAAVGRFSDGEISVQINENVRGSDVFIIQSTCSPTNDNIMELVV 72          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS2_STRR6 (Ribose-phosphate pyrophosphokinase 2 OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=prs2 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.090e-12
Identity = 36/69 (52.17%), Postives = 53/69 (76.81%), Query Frame = 1
Query:  466 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            +KLF+  +N  ++Q+IA  +GV LGK++ ++F+DGEI V ++ESVRG DVY++Q T  P N +LMELLI
Sbjct:    7 MKLFALNSNQEIAQKIAQAVGVPLGKLSSRQFSDGEIQVNIEESVRGYDVYIIQSTSFPVNNHLMELLI 75          
The following BLAST results are available for this feature:
BLAST of FC930796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
PRPS1_HUMAN8.347e-1355.07Ribose-phosphate pyrophosphokinase 1 OS=Homo sapie... [more]
PRPS1_BOVIN8.347e-1355.07Ribose-phosphate pyrophosphokinase 1 OS=Bos taurus... [more]
KPRS_BAUCH8.347e-1350.72Ribose-phosphate pyrophosphokinase OS=Baumannia ci... [more]
KPRS_AGRT58.347e-1350.72Ribose-phosphate pyrophosphokinase OS=Agrobacteriu... [more]
KPRS1_STRP88.347e-1346.38Ribose-phosphate pyrophosphokinase 1 OS=Streptococ... [more]
KPRS1_STRP68.347e-1346.38Ribose-phosphate pyrophosphokinase 1 OS=Streptococ... [more]
KPRS1_STRP38.347e-1346.38Ribose-phosphate pyrophosphokinase 1 OS=Streptococ... [more]
KPRS1_STRP18.347e-1346.38Ribose-phosphate pyrophosphokinase 1 OS=Streptococ... [more]
KPRS_BUCAP1.090e-1247.83Ribose-phosphate pyrophosphokinase OS=Buchnera aph... [more]
KPRS2_STRR61.090e-1252.17Ribose-phosphate pyrophosphokinase 2 OS=Streptococ... [more]

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Properties
Property NameValue
Genbank descriptionC34109B05EF PostHarvP1 Citrus clementina cDNA clone C34109B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930796 ID=FC930796; Name=FC930796; organism=Citrus clementina; type=EST; length=674bp
GATGAAAATCCAAAGCGACGAAGCAAAATAGCCAAAGAAGAAGAAAAAGC
AACCGAAGCTCTCTCTGCCTCCTCACCGTCACCACAAAAACAAAAGGAAA
GAAAGAAAGAGAGTGAGTGAGAGAAAGAGAGATCAAAAGGAGAGAGAGCT
GAAACAACACAACAGATAACAATGGCTTCGCTGACGATGCCGCGCCCTTC
ACAATCCACGTCAGCTTCTTGCTCTTCGCCTATCCCCAGTCGCTGTTCTT
TCGGTGACCAAAACCCAACTTTTTCATTCAGTTTCAGGGACTCTCGCTCT
CGGGTTCACGTCTGTAATGCCGCCGCCGTTAGATGTGACATGGCTGAGGC
ATTGAATTTTCCAAATGGGAAGCCTAATATTCCAGTTCTAAACGAACGGA
CGCTGCCCAAATTTTTGGAAACGGCGCGTATGGAGAAAACTGTCAACAGA
ACTACAAATAACAGGATCAAATTGTTCTCTGGCACCGCCAATCCTGCTCT
TTCCCAGGAAATTGCTTGCTACATGGGCGTGGAACTGGGAAAGATCAACA
TAAAGCGATTTGCTGATGGTGAAATTTATGTTCAGCTGCAAGAGAGTGTT
AGAGGATGTGATGTTTATTTGGTGCAGCCCACCTGTCCTCCCGGCAATGA
AAATCTCATGGAGCTTTTGATAAT
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