FC930796

Overview
NameFC930796
Unique NameFC930796
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length674
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_THEAB (Ribose-phosphate pyrophosphokinase OS=Thermosipho africanus (strain TCF52B) GN=prs PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.729e-16
Identity = 39/71 (54.93%), Postives = 53/71 (74.65%), Query Frame = 1
Query:  460 NRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            N +K+FSG AN  L+ +++ Y+G  L    + RFADGEI V++ E+VRG D +++QPTCPP NENLMELLI
Sbjct:    6 NEMKIFSGNANRELAIKVSEYIGTRLADCEVGRFADGEINVKIGETVRGHDTFIIQPTCPPVNENLMELLI 76          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_HELPJ (Ribose-phosphate pyrophosphokinase OS=Helicobacter pylori J99 GN=prs PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.176e-16
Identity = 37/75 (49.33%), Postives = 56/75 (74.67%), Query Frame = 1
Query:  448 RTTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            +T     K+FSG+A+PA  +E++ ++G  L K  I +F+DGEI +Q+ ESVRG D++++QPTC P N+NLMELL+
Sbjct:    7 KTKMRGFKIFSGSAHPAFGKEVSKHLGFPLSKAVIGKFSDGEINIQISESVRGKDIFIIQPTCVPVNDNLMELLV 81          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_FUSNN (Ribose-phosphate pyrophosphokinase OS=Fusobacterium nucleatum subsp. nucleatum GN=prs PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.176e-16
Identity = 39/71 (54.93%), Postives = 56/71 (78.87%), Query Frame = 1
Query:  460 NRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            N +K+FSG +N  L+++IA   G++LGK  I+RF DGE+Y++++E+VRG DV++VQ T  P NENLMELLI
Sbjct:    5 NNVKIFSGNSNLELAKKIAEKAGLQLGKAEIQRFKDGEVYIEIEETVRGRDVFVVQSTSEPVNENLMELLI 75          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_CLOPE (Ribose-phosphate pyrophosphokinase OS=Clostridium perfringens GN=prs PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.066e-16
Identity = 38/72 (52.78%), Postives = 54/72 (75.00%), Query Frame = 1
Query:  457 NNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            +  IK+F+G ++P L++EIA  + + LGK  +  F+DGEI V ++E+VRGCDV++VQ TC P N NLMELLI
Sbjct:    5 SKNIKIFTGNSHPELAREIAKALNIPLGKAEVGTFSDGEISVNIKETVRGCDVFIVQSTCSPVNNNLMELLI 76          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_HELPY (Ribose-phosphate pyrophosphokinase OS=Helicobacter pylori GN=prs PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.054e-15
Identity = 36/68 (52.94%), Postives = 54/68 (79.41%), Query Frame = 1
Query:  469 KLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            K+FSG+A+PA  +E++ ++G  L K  I +F+DGEI +Q+ ESVRG D++++QPTC P N+NLMELL+
Sbjct:   14 KIFSGSAHPAFGKEVSKHLGFPLSKAVIGKFSDGEINIQISESVRGKDIFIIQPTCVPVNDNLMELLV 81          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_CORAM (Ribose-phosphate pyrophosphokinase OS=Corynebacterium ammoniagenes GN=prs PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.003e-15
Identity = 35/72 (48.61%), Postives = 57/72 (79.17%), Query Frame = 1
Query:  457 NNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            N+ +K+FS  +N  L+++IA ++GV LGK ++ RF+DGE+ + ++ES+RGCDV+++Q T  P NE++MELLI
Sbjct:    7 NSNLKVFSLNSNKELAEQIAKHIGVGLGKCSVDRFSDGEVQINIEESIRGCDVFIIQSTSFPVNEHIMELLI 78          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_BACCR (Ribose-phosphate pyrophosphokinase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=prs PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.003e-15
Identity = 35/72 (48.61%), Postives = 57/72 (79.17%), Query Frame = 1
Query:  457 NNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            N+ +K+FS  +N  L+++IA ++GV LGK ++ RF+DGE+ + ++ES+RGCDV+++Q T  P NE++MELLI
Sbjct:    7 NSNLKVFSLNSNKELAEQIAKHIGVGLGKCSVDRFSDGEVQINIEESIRGCDVFIIQSTSFPVNEHIMELLI 78          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_BACAN (Ribose-phosphate pyrophosphokinase OS=Bacillus anthracis GN=prs PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.003e-15
Identity = 35/72 (48.61%), Postives = 57/72 (79.17%), Query Frame = 1
Query:  457 NNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            N+ +K+FS  +N  L+++IA ++GV LGK ++ RF+DGE+ + ++ES+RGCDV+++Q T  P NE++MELLI
Sbjct:    7 NSNLKVFSLNSNKELAEQIAKHIGVGLGKCSVDRFSDGEVQINIEESIRGCDVFIIQSTSFPVNEHIMELLI 78          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_HELHP (Ribose-phosphate pyrophosphokinase OS=Helicobacter hepaticus GN=prs PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.228e-15
Identity = 37/68 (54.41%), Postives = 51/68 (75.00%), Query Frame = 1
Query:  469 KLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            K+FSG+A+   S E+A  + + L K  I RF+DGEI VQ+ ESVRG D++++QPTC P N++LMELLI
Sbjct:    5 KIFSGSAHTLFSNEVAKCLDISLSKTTINRFSDGEINVQIGESVRGKDIFIIQPTCAPANDHLMELLI 72          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_CAMJE (Ribose-phosphate pyrophosphokinase OS=Campylobacter jejuni GN=prs PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.829e-15
Identity = 36/68 (52.94%), Postives = 52/68 (76.47%), Query Frame = 1
Query:  469 KLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            K+FSG+AN   +++++ Y+ + L    +KRF+DGEI VQ+ ESVRG DV+++Q TC P N+NLMELLI
Sbjct:    5 KIFSGSANVEFARQVSKYLSLPLSDAGVKRFSDGEISVQIDESVRGKDVFIIQSTCAPTNDNLMELLI 72          
The following BLAST results are available for this feature:
BLAST of FC930796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
KPRS_THEAB4.729e-1654.93Ribose-phosphate pyrophosphokinase OS=Thermosipho ... [more]
KPRS_HELPJ6.176e-1649.33Ribose-phosphate pyrophosphokinase OS=Helicobacter... [more]
KPRS_FUSNN6.176e-1654.93Ribose-phosphate pyrophosphokinase OS=Fusobacteriu... [more]
KPRS_CLOPE8.066e-1652.78Ribose-phosphate pyrophosphokinase OS=Clostridium ... [more]
KPRS_HELPY1.054e-1552.94Ribose-phosphate pyrophosphokinase OS=Helicobacter... [more]
KPRS_CORAM4.003e-1548.61Ribose-phosphate pyrophosphokinase OS=Corynebacter... [more]
KPRS_BACCR4.003e-1548.61Ribose-phosphate pyrophosphokinase OS=Bacillus cer... [more]
KPRS_BACAN4.003e-1548.61Ribose-phosphate pyrophosphokinase OS=Bacillus ant... [more]
KPRS_HELHP5.228e-1554.41Ribose-phosphate pyrophosphokinase OS=Helicobacter... [more]
KPRS_CAMJE6.829e-1552.94Ribose-phosphate pyrophosphokinase OS=Campylobacte... [more]

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Properties
Property NameValue
Genbank descriptionC34109B05EF PostHarvP1 Citrus clementina cDNA clone C34109B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930796 ID=FC930796; Name=FC930796; organism=Citrus clementina; type=EST; length=674bp
GATGAAAATCCAAAGCGACGAAGCAAAATAGCCAAAGAAGAAGAAAAAGC
AACCGAAGCTCTCTCTGCCTCCTCACCGTCACCACAAAAACAAAAGGAAA
GAAAGAAAGAGAGTGAGTGAGAGAAAGAGAGATCAAAAGGAGAGAGAGCT
GAAACAACACAACAGATAACAATGGCTTCGCTGACGATGCCGCGCCCTTC
ACAATCCACGTCAGCTTCTTGCTCTTCGCCTATCCCCAGTCGCTGTTCTT
TCGGTGACCAAAACCCAACTTTTTCATTCAGTTTCAGGGACTCTCGCTCT
CGGGTTCACGTCTGTAATGCCGCCGCCGTTAGATGTGACATGGCTGAGGC
ATTGAATTTTCCAAATGGGAAGCCTAATATTCCAGTTCTAAACGAACGGA
CGCTGCCCAAATTTTTGGAAACGGCGCGTATGGAGAAAACTGTCAACAGA
ACTACAAATAACAGGATCAAATTGTTCTCTGGCACCGCCAATCCTGCTCT
TTCCCAGGAAATTGCTTGCTACATGGGCGTGGAACTGGGAAAGATCAACA
TAAAGCGATTTGCTGATGGTGAAATTTATGTTCAGCTGCAAGAGAGTGTT
AGAGGATGTGATGTTTATTTGGTGCAGCCCACCTGTCCTCCCGGCAATGA
AAATCTCATGGAGCTTTTGATAAT
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