FC930805 | Citrus Genome Database

Overview


Name	FC930805
Unique Name	FC930805
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	737

Libraries


Library Name	Type
PostHarvP1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Ccv1_Contig9336	contig	Ccv1_Contig9336:3..739.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of FC930805 vs. ExPASy Swiss-Prot
Match: UBIQ_ARATH (Ubiquitin OS=Arabidopsis thaliana GN=UBQ1 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.247e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  295 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 522
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 149.058 bits (375), Expect = 2.400e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 1

Query:   67 MQIFVKTLTGKTITLEVKSSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 294
            MQIFVKTLTGKTITLEV+SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 119.398 bits (298), Expect = 3.457e-28
Identity = 59/63 (93.65%), Postives = 61/63 (96.83%), Query Frame = 1

Query:  523 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRR 711
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY  ++
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 63

HSP 4 Score: 26.9498 bits (58), Expect = 3.457e-28
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 3

Query:  699 HIQKESTLHLVLR 737
            +IQKESTLHLVLR
Sbjct:   60 NIQKESTLHLVLR 72

[Close]

BLAST of FC930805 vs. ExPASy Swiss-Prot
Match: UBIQ_COPCO (Ubiquitin OS=Coprinus congregatus PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.837e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  295 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 522
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 147.902 bits (372), Expect = 5.346e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1

Query:   67 MQIFVKTLTGKTITLEVKSSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 294
            MQIFVKTLTGKTITLEV+SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 118.242 bits (295), Expect = 7.632e-28
Identity = 58/63 (92.06%), Postives = 61/63 (96.83%), Query Frame = 1

Query:  523 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRR 711
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  ++
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 63

HSP 4 Score: 26.9498 bits (58), Expect = 7.632e-28
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 3

Query:  699 HIQKESTLHLVLR 737
            +IQKESTLHLVLR
Sbjct:   60 NIQKESTLHLVLR 72

[Close]

BLAST of FC930805 vs. ExPASy Swiss-Prot
Match: UBIQ_CHLRE (Ubiquitin OS=Chlamydomonas reinhardtii GN=UBI1 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.400e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  295 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 522
            MQIFVKTLTGKTITLEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 147.517 bits (371), Expect = 6.982e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1

Query:   67 MQIFVKTLTGKTITLEVKSSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 294
            MQIFVKTLTGKTITLEV+SSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 117.857 bits (294), Expect = 9.938e-28
Identity = 58/63 (92.06%), Postives = 61/63 (96.83%), Query Frame = 1

Query:  523 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRR 711
            MQIFVKTLTGKTITLEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY  ++
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 63

HSP 4 Score: 26.9498 bits (58), Expect = 9.938e-28
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 3

Query:  699 HIQKESTLHLVLR 737
            +IQKESTLHLVLR
Sbjct:   60 NIQKESTLHLVLR 72

[Close]

BLAST of FC930805 vs. ExPASy Swiss-Prot
Match: UBIQ_YEAST (Ubiquitin OS=Saccharomyces cerevisiae GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.093e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  295 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 522
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 146.747 bits (369), Expect = 1.191e-34
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 1

Query:   67 MQIFVKTLTGKTITLEVKSSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 294
            MQIFVKTLTGKTITLEV+SSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 117.087 bits (292), Expect = 1.685e-27
Identity = 57/63 (90.48%), Postives = 61/63 (96.83%), Query Frame = 1

Query:  523 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRR 711
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  ++
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 63

HSP 4 Score: 26.9498 bits (58), Expect = 1.685e-27
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 3

Query:  699 HIQKESTLHLVLR 737
            +IQKESTLHLVLR
Sbjct:   60 NIQKESTLHLVLR 72

[Close]

BLAST of FC930805 vs. ExPASy Swiss-Prot
Match: UBIQ_SCHPO (Ubiquitin OS=Schizosaccharomyces pombe GN=ubi1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.093e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  295 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 522
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 146.747 bits (369), Expect = 1.191e-34
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 1

Query:   67 MQIFVKTLTGKTITLEVKSSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 294
            MQIFVKTLTGKTITLEV+SSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 117.087 bits (292), Expect = 1.685e-27
Identity = 57/63 (90.48%), Postives = 61/63 (96.83%), Query Frame = 1

Query:  523 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRR 711
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  ++
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 63

HSP 4 Score: 26.9498 bits (58), Expect = 1.685e-27
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 3

Query:  699 HIQKESTLHLVLR 737
            +IQKESTLHLVLR
Sbjct:   60 NIQKESTLHLVLR 72

[Close]

BLAST of FC930805 vs. ExPASy Swiss-Prot
Match: UBIQ_KLULA (Ubiquitin OS=Kluyveromyces lactis GN=ubi3 PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 4.093e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  295 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 522
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 146.747 bits (369), Expect = 1.191e-34
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 1

Query:   67 MQIFVKTLTGKTITLEVKSSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 294
            MQIFVKTLTGKTITLEV+SSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 117.087 bits (292), Expect = 1.685e-27
Identity = 57/63 (90.48%), Postives = 61/63 (96.83%), Query Frame = 1

Query:  523 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRR 711
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  ++
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 63

HSP 4 Score: 26.9498 bits (58), Expect = 1.685e-27
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 3

Query:  699 HIQKESTLHLVLR 737
            +IQKESTLHLVLR
Sbjct:   60 NIQKESTLHLVLR 72

[Close]

BLAST of FC930805 vs. ExPASy Swiss-Prot
Match: UBIQ_CRYNE (Ubiquitin OS=Cryptococcus neoformans GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.093e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  295 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 522
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 146.747 bits (369), Expect = 1.191e-34
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 1

Query:   67 MQIFVKTLTGKTITLEVKSSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 294
            MQIFVKTLTGKTITLEV+SSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 117.087 bits (292), Expect = 1.685e-27
Identity = 57/63 (90.48%), Postives = 61/63 (96.83%), Query Frame = 1

Query:  523 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRR 711
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  ++
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 63

HSP 4 Score: 26.9498 bits (58), Expect = 1.685e-27
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 3

Query:  699 HIQKESTLHLVLR 737
            +IQKESTLHLVLR
Sbjct:   60 NIQKESTLHLVLR 72

[Close]

BLAST of FC930805 vs. ExPASy Swiss-Prot
Match: UBIQ_CANAL (Ubiquitin OS=Candida albicans GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.093e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  295 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 522
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 146.747 bits (369), Expect = 1.191e-34
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 1

Query:   67 MQIFVKTLTGKTITLEVKSSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 294
            MQIFVKTLTGKTITLEV+SSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 117.087 bits (292), Expect = 1.685e-27
Identity = 57/63 (90.48%), Postives = 61/63 (96.83%), Query Frame = 1

Query:  523 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRR 711
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  ++
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 63

HSP 4 Score: 26.9498 bits (58), Expect = 1.685e-27
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 3

Query:  699 HIQKESTLHLVLR 737
            +IQKESTLHLVLR
Sbjct:   60 NIQKESTLHLVLR 72

[Close]

BLAST of FC930805 vs. ExPASy Swiss-Prot
Match: UBL1_ORYSJ (Ubiquitin-like protein 1 OS=Oryza sativa subsp. japonica GN=UBL1 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.346e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  295 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 522
            MQIFVKTLTGKTITLEVESSDTI NVKAK+QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 146.362 bits (368), Expect = 1.555e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   67 MQIFVKTLTGKTITLEVKSSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 294
            MQIFVKTLTGKTITLEV+SSDTI NVKAK+QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 116.701 bits (291), Expect = 2.193e-27
Identity = 57/63 (90.48%), Postives = 60/63 (95.24%), Query Frame = 1

Query:  523 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRR 711
            MQIFVKTLTGKTITLEVESSDTI NVKAK+QDKEGIPPDQQRLIFAGKQLEDGRTLADY  ++
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 63

HSP 4 Score: 26.9498 bits (58), Expect = 2.193e-27
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 3

Query:  699 HIQKESTLHLVLR 737
            +IQKESTLHLVLR
Sbjct:   60 NIQKESTLHLVLR 72

[Close]

BLAST of FC930805 vs. ExPASy Swiss-Prot
Match: UBIQ_NEUCR (Ubiquitin OS=Neurospora crassa GN=ubi-1 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.982e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  295 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 522
            MQIFVKTLTGKTITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 2.031e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   67 MQIFVKTLTGKTITLEVKSSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 294
            MQIFVKTLTGKTITLEV+SSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 116.316 bits (290), Expect = 2.856e-27
Identity = 57/63 (90.48%), Postives = 60/63 (95.24%), Query Frame = 1

Query:  523 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRR 711
            MQIFVKTLTGKTITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  ++
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 63

HSP 4 Score: 26.9498 bits (58), Expect = 2.856e-27
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 3

Query:  699 HIQKESTLHLVLR 737
            +IQKESTLHLVLR
Sbjct:   60 NIQKESTLHLVLR 72

The following BLAST results are available for this feature:

BLAST of FC930805 vs. ExPASy Swiss-Prot

BLAST of FC930805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_ARATH	8.247e-36	100.00	Ubiquitin OS=Arabidopsis thaliana GN=UBQ1 PE=1 SV=...	[more]
UBIQ_COPCO	1.837e-35	98.68	Ubiquitin OS=Coprinus congregatus PE=1 SV=1	[more]
UBIQ_CHLRE	2.400e-35	98.68	Ubiquitin OS=Chlamydomonas reinhardtii GN=UBI1 PE=...	[more]
UBIQ_YEAST	4.093e-35	97.37	Ubiquitin OS=Saccharomyces cerevisiae GN=UBI1 PE=1...	[more]
UBIQ_SCHPO	4.093e-35	97.37	Ubiquitin OS=Schizosaccharomyces pombe GN=ubi1 PE=...	[more]
UBIQ_KLULA	4.093e-35	97.37	Ubiquitin OS=Kluyveromyces lactis GN=ubi3 PE=1 SV=...	[more]
UBIQ_CRYNE	4.093e-35	97.37	Ubiquitin OS=Cryptococcus neoformans GN=UBI1 PE=1 ...	[more]
UBIQ_CANAL	4.093e-35	97.37	Ubiquitin OS=Candida albicans GN=UBI1 PE=1 SV=1	[more]
UBL1_ORYSJ	5.346e-35	97.37	Ubiquitin-like protein 1 OS=Oryza sativa subsp. ja...	[more]
UBIQ_NEUCR	6.982e-35	97.37	Ubiquitin OS=Neurospora crassa GN=ubi-1 PE=1 SV=1	[more]

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Properties


Property Name	Value
Genbank description	C34109C02EF PostHarvP1 Citrus clementina cDNA clone C34109C02, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC930805 ID=FC930805; Name=FC930805; organism=Citrus clementina; type=EST; length=737bp
GGGAATCGGGTTATTCGATATTCTCAACAAATCTCTCCAATTCTCTCGCT
AAGAAACTTTTAAAAGATGCAGATCTTCGTGAAAACCCTAACCGGCAAGA
CCATTACTCTCGAAGTCAAGAGCTCCGACACCATCGACAACGTCAAGGCC
AAGATCCAAGACAAGGAAGGAATCCCTCCGGACCAGCAGCGTCTGATCTT
CGCCGGAAAACAGCTCGAAGACGGCCGCACCTTGGCCGATTACAATATCC
AAAAGGAATCGACGCTTCATCTGGTGCTTCGTCTCCGTGGAGGCATGCAG
ATCTTCGTGAAAACCCTAACCGGCAAGACCATTACTCTCGAAGTTGAGAG
CTCCGACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGA
TTCCGCCGGACCAGCAGAGGCTGATCTTCGCCGGAAAGCAACTCGAGGAC
GGCCGCACCTTGGCCGATTACAATATCCAGAAGGAATCAACTCTTCACCT
CGTGCTTCGTCTCCGTGGGGGCATGCAGATATTCGTCAAAACCCTAACGG
GAAAGACGATTACCCTCGAAGTCGAGAGCTCCGACACGATCGACAACGTC
AAGGCCAAGATCCAGGACAAGGAAGGGATTCCGCCGGACCAGCAGCGTTT
GATCTTCGCTGGCAAGCAGCTGGAGGATGGAAGGACGCTCGCGGATTACA
CATTCAGAAGGAATCAACTCTTCATCTGGTTTTGCGT