FC930819
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930819 vs. ExPASy Swiss-Prot
Match: IDH_MYCTU (Isocitrate dehydrogenase [NADP] OS=Mycobacterium tuberculosis GN=icd PE=3 SV=1) HSP 1 Score: 309.686 bits (792), Expect = 9.690e-84 Identity = 154/230 (66.96%), Postives = 179/230 (77.83%), Query Frame = 3 Query: 3 VALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDLRAD 692 V L MYN ESIR FA AS + KWP+YLSTKNTILK YDG FKD F+ VYE +K++FEAAG+ YEHRLIDDMVA LK EGGYVWACKNYDGDVQSD +AQG+GSLGLMTSVL+ DGKT+EAEAAHGTVTRHYR +Q G TSTN IASIFAW+RGL HR KLD ++DF KLE+ I TVESGKMTKDLA++I + +LN+EEF+DA+AD+L + Sbjct: 181 VVLGMYNFKESIRDFARASFSYGLNAKWPVYLSTKNTILKAYDGMFKDEFERVYEEEFKAQFEAAGLTYEHRLIDDMVAACLKWEGGYVWACKNYDGDVQSDTVAQGYGSLGLMTSVLMTADGKTVEAEAAHGTVTRHYRQYQAGKPTSTNPIASIFAWTRGLQHRGKLDGTPEVIDFAHKLESVVIATVESGKMTKDLAILIG----PEQDWLNSEEFLDAIADNLEKE 406
BLAST of FC930819 vs. ExPASy Swiss-Prot
Match: IDH_MYCBO (Isocitrate dehydrogenase [NADP] OS=Mycobacterium bovis GN=icd PE=3 SV=1) HSP 1 Score: 309.686 bits (792), Expect = 9.690e-84 Identity = 154/230 (66.96%), Postives = 179/230 (77.83%), Query Frame = 3 Query: 3 VALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDLRAD 692 V L MYN ESIR FA AS + KWP+YLSTKNTILK YDG FKD F+ VYE +K++FEAAG+ YEHRLIDDMVA LK EGGYVWACKNYDGDVQSD +AQG+GSLGLMTSVL+ DGKT+EAEAAHGTVTRHYR +Q G TSTN IASIFAW+RGL HR KLD ++DF KLE+ I TVESGKMTKDLA++I + +LN+EEF+DA+AD+L + Sbjct: 181 VVLGMYNFKESIRDFARASFSYGLNAKWPVYLSTKNTILKAYDGMFKDEFERVYEEEFKAQFEAAGLTYEHRLIDDMVAACLKWEGGYVWACKNYDGDVQSDTVAQGYGSLGLMTSVLMTADGKTVEAEAAHGTVTRHYRQYQAGKPTSTNPIASIFAWTRGLQHRGKLDGTPEVIDFAHKLESVVIATVESGKMTKDLAILIG----PEQDWLNSEEFLDAIADNLEKE 406
BLAST of FC930819 vs. ExPASy Swiss-Prot
Match: IDHP_SCHPO (Probable isocitrate dehydrogenase [NADP], mitochondrial OS=Schizosaccharomyces pombe GN=idp1 PE=2 SV=1) HSP 1 Score: 308.145 bits (788), Expect = 2.819e-83 Identity = 151/230 (65.65%), Postives = 181/230 (78.70%), Query Frame = 3 Query: 3 VALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDLRAD 692 VA+SMYNTD+SIR FA +S A QKK PLYLSTKNTILKKYDGRFKD FQEVYE+++K KFE G+WY+HRLIDDMVA A+KS GG+VWACKNYDGDV SD +AQ +GSLGLMTSVL+ P+G+T E+EAAHGTV RHY + KG +TSTNSIASIFAW+RGLAHR +LD N RL+ F LE AC+ VE G MTKDL L+ + Y++T EF+DAV +L ++ Sbjct: 188 VAMSMYNTDDSIRGFAHSSFQMALQKKMPLYLSTKNTILKKYDGRFKDTFQEVYESDYKQKFEELGLWYQHRLIDDMVAQAIKSNGGFVWACKNYDGDVMSDVVAQAYGSLGLMTSVLIHPNGRTFESEAAHGTVQRHYMQYLKGKKTSTNSIASIFAWTRGLAHRGRLDGNERLVKFANALEHACVRCVEKGIMTKDLYLL----SKSPNGYVDTFEFLDAVKSELDSE 413
BLAST of FC930819 vs. ExPASy Swiss-Prot
Match: IDH1_CANTR (Isocitrate dehydrogenase [NADP], mitochondrial OS=Candida tropicalis GN=IDP1 PE=3 SV=1) HSP 1 Score: 303.138 bits (775), Expect = 9.069e-82 Identity = 155/229 (67.69%), Postives = 178/229 (77.73%), Query Frame = 3 Query: 3 VALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGK-MTKDLALIIHGSKMTREHYLNTEEFIDAVADDLR 686 V L+MYNTDESI FA AS A K PLY+STKNTILKKYDGRFKDIFQ++YE ++ ++FE G+WYEHRLIDDMVA +KS+GG+V A KNYDGDVQSD +AQGFGSLGLMTS L+ PDGK EAEAAHGTVTRHYR HQ+G ETSTNSIASIFAW+RGLA R KLD ++DF KLE A I TVE + MTKDLAL + K R Y+ T EF+DAVAD L+ Sbjct: 203 VGLAMYNTDESITGFAHASFKMALAKGLPLYMSTKNTILKKYDGRFKDIFQQIYEQDYAAEFEKQGLWYEHRLIDDMVAQMIKSKGGFVMALKNYDGDVQSDIVAQGFGSLGLMTSALMTPDGKAYEAEAAHGTVTRHYRQHQQGKETSTNSIASIFAWTRGLAQRGKLDETPDVVDFASKLEQATIDTVEVDRIMTKDLALAM--GKTDRSAYVTTTEFLDAVADRLK 429
BLAST of FC930819 vs. ExPASy Swiss-Prot
Match: IDH_SPHYA (Isocitrate dehydrogenase [NADP] OS=Sphingomonas yanoikuyae GN=icd PE=3 SV=1) HSP 1 Score: 301.212 bits (770), Expect = 3.446e-81 Identity = 150/230 (65.22%), Postives = 179/230 (77.83%), Query Frame = 3 Query: 3 VALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDLRAD 692 VA+ MYN DESIR FA+AS N + WP+YLSTKNTILK YDGRFKD+FQEV++A + KF+AAGI YEHRLIDDMVA ALK G +VWACKNYDGDVQSD +AQGFGSLGLMTSVL+ PDGKT+EAEAAHGTVTRHYR HQ+G TSTN IASIFAW++GL+ R K D+ ++ F E LE CI TVE G MTKDLAL+I + ++ TE+F +A+ +L A+ Sbjct: 176 VAMGMYNLDESIRDFAKASFNYGLNRGWPVYLSTKNTILKAYDGRFKDLFQEVFDAEFADKFKAAGIVYEHRLIDDMVASALKWSGKFVWACKNYDGDVQSDTVAQGFGSLGLMTSVLLSPDGKTVEAEAAHGTVTRHYRQHQQGKATSTNPIASIFAWTQGLSFRGKFDDTPDVVKFAETLEQVCIKTVEGGAMTKDLALLIGPD----QAWMTTEQFFEAIRVNLEAE 401
BLAST of FC930819 vs. ExPASy Swiss-Prot
Match: IDHP_YEAST (Isocitrate dehydrogenase [NADP], mitochondrial OS=Saccharomyces cerevisiae GN=IDP1 PE=1 SV=1) HSP 1 Score: 299.286 bits (765), Expect = 1.310e-80 Identity = 156/231 (67.53%), Postives = 179/231 (77.49%), Query Frame = 3 Query: 3 VALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTV-ESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDLRAD 692 VA++MYNTDESI FA +S A KK L+LSTKNTILKKYDGRFKDIFQEVYEA +KSKFE GI YEHRLIDDMVA +KS+GG++ A KNYDGDVQSD +AQGFGSLGLMTS+LV PDGKT E+EAAHGTVTRHYR +QKG ETSTNSIASIFAWSRGL R +LDN L F LE+A + TV + G MTKDLAL ++ R Y+ TEEF+DAV L+ + Sbjct: 195 VAMAMYNTDESIEGFAHSSFKLAIDKKLNLFLSTKNTILKKYDGRFKDIFQEVYEAQYKSKFEQLGIHYEHRLIDDMVAQMIKSKGGFIMALKNYDGDVQSDIVAQGFGSLGLMTSILVTPDGKTFESEAAHGTVTRHYRKYQKGEETSTNSIASIFAWSRGLLKRGELDNTPALCKFANILESATLNTVQQDGIMTKDLALACGNNE--RSAYVTTEEFLDAVEKRLQKE 423
BLAST of FC930819 vs. ExPASy Swiss-Prot
Match: IDHC_YEAST (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Saccharomyces cerevisiae GN=IDP2 PE=1 SV=2) HSP 1 Score: 297.745 bits (761), Expect = 3.810e-80 Identity = 149/231 (64.50%), Postives = 181/231 (78.35%), Query Frame = 3 Query: 3 VALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTV-ESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDLRAD 692 VA+ MYNT +SI FA+AS A ++K PLY +TKNTILKKYDG+FKD+F+ +Y ++K KFE+ GIWYEHRLIDDMVA LKS+GGY+ A KNYDGDV+SD +AQGFGSLGLMTSVL+ PDGKT E+EAAHGTVTRH+R HQ+G ETSTNSIASIFAW+RG+ R KLDN ++ F + LE+A + TV E G MTKDLALI+ K R Y+ TEEFIDAV L+ + Sbjct: 178 VAMMMYNTTDSIEGFAKASFELAIERKLPLYSTTKNTILKKYDGKFKDVFEAMYARSYKEKFESLGIWYEHRLIDDMVAQMLKSKGGYIIAMKNYDGDVESDIVAQGFGSLGLMTSVLITPDGKTFESEAAHGTVTRHFRQHQQGKETSTNSIASIFAWTRGIIQRGKLDNTPDVVKFGQILESATVNTVQEDGIMTKDLALIL--GKSERSAYVTTEEFIDAVESRLKKE 406
BLAST of FC930819 vs. ExPASy Swiss-Prot
Match: IDH2_CANTR (Isocitrate dehydrogenase [NADP] peroxisomal OS=Candida tropicalis GN=IDP2 PE=1 SV=3) HSP 1 Score: 288.886 bits (738), Expect = 1.770e-77 Identity = 150/228 (65.79%), Postives = 174/228 (76.32%), Query Frame = 3 Query: 3 VALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGK-MTKDLALIIHGSKMTREHYLNTEEFIDAVADDL 683 VALSMYNTD SI FAE+S A ++K L+ STKNTILKKYDG+FKDIF+ +Y + +K+K + GIWYEHRLIDDMVA LKS+GGY+ A KNYDGDVQSD +AQGFGSLGLMTSVLV PDGK E+EAAHGTVTRHYR HQ+G ETSTNSIASI+AW+RGL R KLD+ ++ F E+LE A I TV MTKDLAL K R Y+ TEEFID VA+ L Sbjct: 180 VALSMYNTDASITDFAESSFQLAIERKLNLFSSTKNTILKKYDGKFKDIFEGLYASKYKTKMDELGIWYEHRLIDDMVAQMLKSKGGYIIAMKNYDGDVQSDIVAQGFGSLGLMTSVLVTPDGKAFESEAAHGTVTRHYRQHQQGKETSTNSIASIYAWTRGLIQRGKLDDTPEVVKFAEELEKAVIETVSKDNIMTKDLALT--QGKTDRSSYVTTEEFIDGVANRL 405
BLAST of FC930819 vs. ExPASy Swiss-Prot
Match: IDHP_ASPNG (Isocitrate dehydrogenase [NADP], mitochondrial OS=Aspergillus niger GN=icdA PE=2 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 5.150e-77 Identity = 147/231 (63.64%), Postives = 173/231 (74.89%), Query Frame = 3 Query: 3 VALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTV-ESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDLRAD 692 +A + YNTDESIR FA AS A K PLY+STKNTILK+YDGRFKDIFQE+YE+ ++ FEA +WYEHRLIDDMVA +KSEGG+V A KNYDGDVQSD +AQGFGSLGLMTS LV P G+ E+EAAHGTVTRHYR HQKG ETSTN IASIFAW+RGL R KLD ++ F E+LE ACI V + G MTKDLAL + RE ++ T E++ AV L+A+ Sbjct: 265 IAQTQYNTDESIRGFAHASFQMALLKGLPLYMSTKNTILKRYDGRFKDIFQEIYESTYQKDFEAKNLWYEHRLIDDMVAQMIKSEGGFVMALKNYDGDVQSDIVAQGFGSLGLMTSTLVTPTGEAFESEAAHGTVTRHYREHQKGRETSTNPIASIFAWTRGLIQRGKLDETPDVVTFAEELERACIEVVNDEGIMTKDLALAC--GRKEREAWVTTREYMAAVERRLKAN 493
BLAST of FC930819 vs. ExPASy Swiss-Prot
Match: IDHH_YEAST (Isocitrate dehydrogenase [NADP] OS=Saccharomyces cerevisiae GN=IDP3 PE=1 SV=1) HSP 1 Score: 276.944 bits (707), Expect = 6.960e-74 Identity = 138/229 (60.26%), Postives = 175/229 (76.42%), Query Frame = 3 Query: 3 VALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVE-SGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDLR 686 +A++M+NT++SI+ FA+AS A ++K PL+ +TKNTILK YD +FK IF +++ +K KF+A I YEHRLIDDMVA LKS+GG++ A KNYDGDVQSD +AQGFGSLGLMTS+L+ PDGKT E+EAAHGTVTRH+R HQ+G ETSTNSIASIFAW+R + R KLDN ++ F LE A + TV+ GKMTKDLAL++ K R Y+ TEEFID VA L+ Sbjct: 178 IAMAMFNTNDSIKGFAKASFELALKRKLPLFFTTKNTILKNYDNQFKQIFDNLFDKEYKEKFQALKITYEHRLIDDMVAQMLKSKGGFIIAMKNYDGDVQSDIVAQGFGSLGLMTSILITPDGKTFESEAAHGTVTRHFRKHQRGEETSTNSIASIFAWTRAIIQRGKLDNTDDVIKFGNLLEKATLDTVQVGGKMTKDLALML--GKTNRSSYVTTEEFIDEVAKRLQ 404 The following BLAST results are available for this feature:
BLAST of FC930819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930819 ID=FC930819; Name=FC930819; organism=Citrus clementina; type=EST; length=700bpback to top |