FC930820
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3PT_HUMAN (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Homo sapiens GN=GAPDHS PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.493e-27 Identity = 35/66 (53.03%), Postives = 46/66 (69.70%), Query Frame = 3 Query: 39 HSFTAQFHLSRIMGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHG 236 H T + + ++ +GINGFGRIGRLV R +++ V++VAVNDPFI +YM YMFKYDS HG Sbjct: 61 HPATPPPKMVSVARELTVGINGFGRIGRLVLRACMEKG-VKVVAVNDPFIDPEYMVYMFKYDSTHG 125 HSP 2 Score: 71.2478 bits (173), Expect = 1.493e-27 Identity = 33/76 (43.42%), Postives = 46/76 (60.53%), Query Frame = 2 Query: 278 LLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKP 505 L+ ++V+ + P++IPW G+ YVVESTGV+ V+ISAPS DAPMFV+GVNE++Y P Sbjct: 138 LVVDNHEISVYQCKEPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSPDAPMFVMGVNENDYNP 213
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3P_SCHMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.539e-27 Identity = 32/54 (59.26%), Postives = 40/54 (74.07%), Query Frame = 3 Query: 75 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHG 236 M + K+GINGFGRIGRLV R ++ V++V+VNDPFI +YM YM K DS HG Sbjct: 1 MSRAKVGINGFGRIGRLVLRAAFLKNTVDVVSVNDPFIDLEYMVYMIKRDSTHG 54 HSP 2 Score: 70.8626 bits (172), Expect = 2.539e-27 Identity = 42/88 (47.73%), Postives = 53/88 (60.23%), Query Frame = 2 Query: 251 ELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVF-TXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 511 E+ ++ K + G K ++V R+P IPW + GAEYVVESTGVF T VIISAPS DAPMFVVGVNE+ Y+ + Sbjct: 59 EVSTENGKLKVNG-KLISVHCERDPANIPWDKDGAEYVVESTGVFTTIDKAQAHIKNNRAKKVIISAPSADAPMFVVGVNENSYEKSM 145
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3P1_AGABI (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Agaricus bisporus GN=gpd1 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.601e-27 Identity = 34/51 (66.67%), Postives = 40/51 (78.43%), Query Frame = 3 Query: 84 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHG 236 V +GINGFGRIGRLV R LQ + +VAVNDPF+ +YM Y+FKYDSVHG Sbjct: 2 VNVGINGFGRIGRLVLRNALQMQILTVVAVNDPFLDVEYMAYLFKYDSVHG 52 HSP 2 Score: 67.3958 bits (163), Expect = 5.601e-27 Identity = 34/86 (39.53%), Postives = 47/86 (54.65%), Query Frame = 2 Query: 251 ELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPE 508 +++ KD K ++ G K + F R P I WA+ GAEY+VESTGVF V+I+AP P +VVGVN +Y P+ Sbjct: 57 KVETKDGKLIIDGHK-IAAFAEREPANIKWADCGAEYIVESTGVFKTEELAKEHLKGGAKKVVITAPGSGVPTYVVGVNLDKYDPK 141
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3PT_BOVIN (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Bos taurus GN=GAPDHS PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 7.270e-27 Identity = 33/49 (67.35%), Postives = 40/49 (81.63%), Query Frame = 3 Query: 90 IGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHG 236 +GINGFGRIGRLV R +++ V++VAVNDPFI +YM YMFKYDS HG Sbjct: 65 VGINGFGRIGRLVLRACMEKG-VKVVAVNDPFIDLEYMVYMFKYDSTHG 112 HSP 2 Score: 70.0922 bits (170), Expect = 7.270e-27 Identity = 33/76 (43.42%), Postives = 44/76 (57.89%), Query Frame = 2 Query: 278 LLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKP 505 L+ ++VF + P+EIPW G+ +VVE+TGV+ V+I APS DAPMFV+GVNE EY P Sbjct: 125 LVVDNNEISVFQCKQPKEIPWKSVGSPFVVEATGVYLSLEETKAHIEAGAQRVVICAPSPDAPMFVMGVNEKEYNP 200
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3P1_YEAST (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Saccharomyces cerevisiae GN=TDH1 PE=1 SV=3) HSP 1 Score: 80.8777 bits (198), Expect = 7.293e-27 Identity = 36/51 (70.59%), Postives = 42/51 (82.35%), Query Frame = 3 Query: 84 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHG 236 ++I INGFGRIGRLV R+ LQR D+E+VAVNDPFI+ DY YM KYDS HG Sbjct: 2 IRIAINGFGRIGRLVLRLALQRKDIEVVAVNDPFISNDYAAYMVKYDSTHG 52 HSP 2 Score: 60.8474 bits (146), Expect = 7.293e-27 Identity = 29/81 (35.80%), Postives = 41/81 (50.62%), Query Frame = 2 Query: 266 DDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPE 508 DDK ++ + + R+P +PW + V+STGVF V+I+APS APMFVVGVN +Y P+ Sbjct: 61 DDKHIIIDGVKIATYQERDPANLPWGSLKIDVAVDSTGVFKELDTAQKHIDAGAKKVVITAPSSSAPMFVVGVNHTKYTPD 141
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3PT_MACFA (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Macaca fascicularis GN=GAPDHS PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 9.458e-27 Identity = 33/52 (63.46%), Postives = 42/52 (80.77%), Query Frame = 3 Query: 81 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHG 236 ++ +GINGFGRIGRLV R +++ V++VAVNDPFI +YM YMFKYDS HG Sbjct: 76 ELTVGINGFGRIGRLVLRACMEKG-VKVVAVNDPFIDPEYMVYMFKYDSTHG 126 HSP 2 Score: 69.3218 bits (168), Expect = 9.458e-27 Identity = 32/76 (42.11%), Postives = 45/76 (59.21%), Query Frame = 2 Query: 278 LLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKP 505 L+ ++V+ + P++IPW + G+ YVVESTGV+ V+ISAPS DAP FV+GVNE+ Y P Sbjct: 139 LVVDNHEISVYQCKEPKQIPWRDVGSPYVVESTGVYLSIEAASNHISAGAQRVVISAPSPDAPTFVMGVNENNYNP 214
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3PT_RAT (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus GN=Gapdhs PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.601e-26 Identity = 34/52 (65.38%), Postives = 42/52 (80.77%), Query Frame = 3 Query: 81 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHG 236 ++ +GINGFGRIGRLV RV +++ V +VAVNDPFI +YM YMFKYDS HG Sbjct: 99 ELTVGINGFGRIGRLVLRVCMEKG-VRVVAVNDPFIDPEYMVYMFKYDSTHG 149 HSP 2 Score: 67.3958 bits (163), Expect = 1.601e-26 Identity = 31/69 (44.93%), Postives = 41/69 (59.42%), Query Frame = 2 Query: 299 VTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKP 505 + VF + P+EIPW+ G YVVE+TGV+ VI++APS DAPM V+GVNE +Y P Sbjct: 169 INVFQCKEPKEIPWSSVGNPYVVEATGVYLSIEAASGHISSGARRVIVTAPSPDAPMLVMGVNEKDYNP 237
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3P_PHYIN (Glyceraldehyde-3-phosphate dehydrogenase OS=Phytophthora infestans GN=GPDA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.725e-26 Identity = 36/82 (43.90%), Postives = 44/82 (53.66%), Query Frame = 2 Query: 266 DDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 511 D+ + KP+ VF NPE I W E +YVVESTG FT V+ISAPS DAPMFV+GVN Y+ + Sbjct: 60 DETHIFVNGKPIRVFNEMNPENIKWGEEQVQYVVESTGAFTTLEKASTHLKNGVEKVVISAPSSDAPMFVMGVNHELYEKNM 141 HSP 2 Score: 67.0106 bits (162), Expect = 2.725e-26 Identity = 28/51 (54.90%), Postives = 38/51 (74.51%), Query Frame = 3 Query: 84 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHG 236 + + INGFGRIGRLV R + + +VA+NDPF++T YM YM +YD+VHG Sbjct: 1 MNVAINGFGRIGRLVLRASAKNPLINIVAINDPFVSTTYMEYMLEYDTVHG 51
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3PT_MOUSE (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Mus musculus GN=Gapdhs PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 5.979e-26 Identity = 33/52 (63.46%), Postives = 42/52 (80.77%), Query Frame = 3 Query: 81 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHG 236 ++ +GINGFGRIGRLV RV +++ + +VAVNDPFI +YM YMFKYDS HG Sbjct: 107 ELTVGINGFGRIGRLVLRVCMEKG-IRVVAVNDPFIDPEYMVYMFKYDSTHG 157 HSP 2 Score: 65.855 bits (159), Expect = 5.979e-26 Identity = 29/69 (42.03%), Postives = 41/69 (59.42%), Query Frame = 2 Query: 299 VTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKP 505 + + ++P+EIPW+ G YVVE TGV+ V+++APS DAPMFV+GVNE +Y P Sbjct: 177 INTYQCKDPKEIPWSSIGNPYVVECTGVYLSIEAASAHISSGARRVVVTAPSPDAPMFVMGVNEKDYNP 245
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3P_DICDI (Glyceraldehyde-3-phosphate dehydrogenase OS=Dictyostelium discoideum GN=gpdA PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.725e-25 Identity = 31/51 (60.78%), Postives = 38/51 (74.51%), Query Frame = 3 Query: 84 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHG 236 V IGINGFGRIGRLV R L+ + ++A+N+PF+ YM YMFKYDS HG Sbjct: 3 VPIGINGFGRIGRLVLRASLENPECRVLAINEPFMDVKYMVYMFKYDSTHG 53 HSP 2 Score: 66.2402 bits (160), Expect = 1.725e-25 Identity = 31/68 (45.59%), Postives = 41/68 (60.29%), Query Frame = 2 Query: 299 VTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYK 502 + VF ++P I W+ GAEY+VESTG+F V+ISAPS DAPM+V+GVNE Y+ Sbjct: 73 IHVFAEKDPANIKWSSVGAEYIVESTGLFLSTEKAGVHLKGGAKKVVISAPSTDAPMYVMGVNEETYE 140 The following BLAST results are available for this feature:
BLAST of FC930820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930820 ID=FC930820; Name=FC930820; organism=Citrus clementina; type=EST; length=511bpback to top |