FC930820
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3P1_ECO57 (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia coli O157:H7 GN=gapA PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.851e-20 Identity = 31/51 (60.78%), Postives = 39/51 (76.47%), Query Frame = 3 Query: 84 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHG 236 +K+GINGFGRIGR+V R +R D+E+VA+ND + DYM YM KYDS HG Sbjct: 3 IKVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHG 52 HSP 2 Score: 49.6766 bits (117), Expect = 1.851e-20 Identity = 28/83 (33.73%), Postives = 43/83 (51.81%), Query Frame = 2 Query: 254 LKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFVVGVNEHEY 499 ++VKD ++ G+K + V R+P + W E G + V E+TG+F V+++ PSKD PMFV G N +Y Sbjct: 58 VEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKY 139
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3P1_SALTY (Glyceraldehyde-3-phosphate dehydrogenase OS=Salmonella typhimurium GN=gapA PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 1.851e-20 Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 3 Query: 84 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHG 236 +K+GINGFGRIGR+V R +R D+E+VA+ND + +YM YM KYDS HG Sbjct: 3 IKVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDAEYMAYMLKYDSTHG 52 HSP 2 Score: 51.2174 bits (121), Expect = 1.851e-20 Identity = 28/84 (33.33%), Postives = 44/84 (52.38%), Query Frame = 2 Query: 254 LKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFVVGVNEHEYK 502 ++VKD ++ G+K + V R+P + W E G + V E+TG+F V+++ PSKD PMFV G N +Y+ Sbjct: 58 VEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDNTPMFVKGANFDKYE 140
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3P1_SALTI (Glyceraldehyde-3-phosphate dehydrogenase OS=Salmonella typhi GN=gapA PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 1.851e-20 Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 3 Query: 84 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHG 236 +K+GINGFGRIGR+V R +R D+E+VA+ND + +YM YM KYDS HG Sbjct: 3 IKVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDAEYMAYMLKYDSTHG 52 HSP 2 Score: 51.2174 bits (121), Expect = 1.851e-20 Identity = 28/84 (33.33%), Postives = 44/84 (52.38%), Query Frame = 2 Query: 254 LKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFVVGVNEHEYK 502 ++VKD ++ G+K + V R+P + W E G + V E+TG+F V+++ PSKD PMFV G N +Y+ Sbjct: 58 VEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDNTPMFVKGANFDKYE 140
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3P_HAEIN (Glyceraldehyde-3-phosphate dehydrogenase OS=Haemophilus influenzae GN=gapA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.407e-20 Identity = 32/51 (62.75%), Postives = 38/51 (74.51%), Query Frame = 3 Query: 84 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHG 236 +KIGINGFGRIGR+V R RDD+E+V +ND I +YM YM KYDS HG Sbjct: 3 IKIGINGFGRIGRIVFRAAQHRDDIEVVGIND-LIDVEYMAYMLKYDSTHG 52 HSP 2 Score: 49.6766 bits (117), Expect = 2.407e-20 Identity = 29/83 (34.94%), Postives = 43/83 (51.81%), Query Frame = 2 Query: 254 LKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDA-PMFVVGVNEHEY 499 ++VKD ++ G K + V R+P + W G + VE+TG+F V+++ PSKDA PMFV GVN + Y Sbjct: 58 VEVKDGNLVVNG-KTIRVTAERDPANLNWGAIGVDIAVEATGLFLTDETARKHITAGAKKVVLTGPSKDATPMFVRGVNFNAY 139
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3P_BUCAI (Glyceraldehyde-3-phosphate dehydrogenase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=gapA PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 2.408e-20 Identity = 27/51 (52.94%), Postives = 40/51 (78.43%), Query Frame = 3 Query: 84 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHG 236 +K+GINGFGRIGR++ R+ +R D+E++A+ND + +Y+ YM KYDS HG Sbjct: 3 IKVGINGFGRIGRVLFRLAQKRSDIEIIAIND-LLAPEYIAYMLKYDSTHG 52 HSP 2 Score: 53.9138 bits (128), Expect = 2.408e-20 Identity = 26/82 (31.71%), Postives = 43/82 (52.44%), Query Frame = 2 Query: 266 DDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNEHEYKPE 508 D ++ K + V +++PE++ W + + V+ESTG+F V+++ PSK D PMFV G N H+Y+ E Sbjct: 61 DKDNIIINGKNIRVTSIKDPEKLMWHDLSIDVVIESTGLFLKREQAYKHILAGSKKVVVTGPSKDDIPMFVRGANFHKYQGE 142
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3P_CHLPN (Glyceraldehyde-3-phosphate dehydrogenase OS=Chlamydia pneumoniae GN=gap PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.165e-19 Identity = 30/52 (57.69%), Postives = 41/52 (78.85%), Query Frame = 3 Query: 84 VKIGINGFGRIGRLVARVILQRD-DVELVAVNDPFITTDYMTYMFKYDSVHG 236 +K+ INGFGRIGRLV R IL+R+ VE++A+ND + D +TY+FK+DS HG Sbjct: 1 MKVVINGFGRIGRLVLRQILKRNSSVEVLAIND-LVPGDALTYLFKFDSTHG 51 HSP 2 Score: 57.7658 bits (138), Expect = 1.165e-19 Identity = 28/78 (35.90%), Postives = 41/78 (52.56%), Query Frame = 2 Query: 278 LLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNEHEYKPE 508 L+ G++ + RN + +PW + G + V+E TG+FT V+ISAP K D P FV+GVN + PE Sbjct: 64 LIVGKRKIQFLSERNVQNLPWKDLGVDLVIECTGLFTKKEDAEKHIQAGAKRVLISAPGKGDIPTFVMGVNHKTFNPE 141
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3P_AQUAE (Glyceraldehyde-3-phosphate dehydrogenase OS=Aquifex aeolicus GN=gap PE=1 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 1.515e-19 Identity = 32/86 (37.21%), Postives = 50/86 (58.14%), Query Frame = 2 Query: 254 LKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVV-GVNEHEYKPE 508 ++ KDD ++ G K + VF ++P +IPW + G + V+E+TGVF VII+AP+K+ + VV GVNE +Y P+ Sbjct: 58 VEAKDDSIVVDG-KEIKVFAQKDPSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAKNPDITVVLGVNEEKYNPK 142 HSP 2 Score: 56.225 bits (134), Expect = 1.515e-19 Identity = 25/51 (49.02%), Postives = 36/51 (70.59%), Query Frame = 3 Query: 84 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHG 236 +K+GINGFGRIGR R R+++E+VA+ND ++ ++ KYDSVHG Sbjct: 3 IKVGINGFGRIGRSFFRASWGREEIEIVAIND-LTDAKHLAHLLKYDSVHG 52
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3P_BUCAP (Glyceraldehyde-3-phosphate dehydrogenase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=gapA PE=3 SV=2) HSP 1 Score: 64.3142 bits (155), Expect = 1.516e-19 Identity = 28/52 (53.85%), Postives = 41/52 (78.85%), Query Frame = 3 Query: 84 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGH 239 +KIGINGFGRIGR++ R+ +R+++E+VA+ND + Y+ YM KYDS HG+ Sbjct: 3 IKIGINGFGRIGRVLFRLAQERENIEVVAIND-LLDPKYIAYMLKYDSTHGN 53 HSP 2 Score: 52.7582 bits (125), Expect = 1.516e-19 Identity = 28/87 (32.18%), Postives = 50/87 (57.47%), Query Frame = 2 Query: 251 ELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNEHEYKPE 508 +++VK++ ++ G+K + + +++PE++ W + + V+ESTG+F V+I+ PSK D PMFV G N +YK E Sbjct: 57 DIEVKNNNLIINGKK-IRITSIKDPEKLMWDKLLIDVVIESTGLFLTKDTAYKHILSGAKKVVITGPSKDDIPMFVRGANFDKYKGE 142
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3PC_LEIME (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Leishmania mexicana GN=GAPC PE=3 SV=3) HSP 1 Score: 64.3142 bits (155), Expect = 1.516e-19 Identity = 29/51 (56.86%), Postives = 36/51 (70.59%), Query Frame = 3 Query: 84 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHG 236 VK+GINGFGRIGR+V R R D+E+V +ND + +YM Y KYDS HG Sbjct: 2 VKVGINGFGRIGRVVFRAAQMRPDIEIVGIND-LLDAEYMAYSLKYDSTHG 51 HSP 2 Score: 52.7582 bits (125), Expect = 1.516e-19 Identity = 29/76 (38.16%), Postives = 38/76 (50.00%), Query Frame = 2 Query: 278 LLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNEHEYK 502 L+ K + V R+P + W E G E VVESTG+F V+++ P K D PMFV+GVN YK Sbjct: 64 LVVNGKSIRVTSERDPANLKWDEIGVEVVVESTGLFLTQETAHKHIEAGARRVVMTGPPKDDTPMFVMGVNHTTYK 139
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3P_CHLTR (Glyceraldehyde-3-phosphate dehydrogenase OS=Chlamydia trachomatis GN=gap PE=3 SV=3) HSP 1 Score: 62.003 bits (149), Expect = 2.564e-19 Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = 3 Query: 84 VKIGINGFGRIGRLVARVILQRDD-VELVAVNDPFITTDYMTYMFKYDSVHG 236 ++I INGFGRIGRLV R IL+R+ +E+VA+ND + D +TY+FKYDS HG Sbjct: 1 MRIVINGFGRIGRLVLRQILKRNSPIEVVAIND-LVAGDLLTYLFKYDSTHG 51 HSP 2 Score: 54.299 bits (129), Expect = 2.564e-19 Identity = 27/80 (33.75%), Postives = 43/80 (53.75%), Query Frame = 2 Query: 269 DKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNEHEYKP 505 D L+ GE+ V ++ +++PW + + VVESTG+F V+I+AP+K D P FV+GVN ++ P Sbjct: 61 DGCLVMGERKVHFLAEKDVQKLPWKDLDVDVVVESTGLFVNRDDVAKHLDSGAKRVLITAPAKGDVPTFVMGVNHQQFDP 140 The following BLAST results are available for this feature:
BLAST of FC930820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930820 ID=FC930820; Name=FC930820; organism=Citrus clementina; type=EST; length=511bpback to top |