FC930820
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3P_MYCPN (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycoplasma pneumoniae GN=gapA PE=3 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 2.226e-17 Identity = 26/51 (50.98%), Postives = 37/51 (72.55%), Query Frame = 3 Query: 84 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHG 236 +++ INGFGRIGRLV R +L + ++E+VAVND D + ++ KYDS HG Sbjct: 8 IRVAINGFGRIGRLVFRALLSQKNIEIVAVND-LTHPDTLAHLLKYDSAHG 57 HSP 2 Score: 51.9878 bits (123), Expect = 2.226e-17 Identity = 32/84 (38.10%), Postives = 40/84 (47.62%), Query Frame = 2 Query: 245 HHELKVK---DDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVN 487 H E K K D TL+ +K V VF ++P +PWAE + VVESTG F VIISAP+K + V N Sbjct: 56 HGEFKKKVVAKDNTLMIDKKKVLVFSEKDPANLPWAEHNIDIVVESTGRFVSEEGASLHLQAGAKRVIISAPAKQKTIKTVVYN 139
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3P1_BACCE (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Bacillus cereus GN=gap1 PE=1 SV=3) HSP 1 Score: 55.0694 bits (131), Expect = 2.227e-17 Identity = 27/50 (54.00%), Postives = 34/50 (68.00%), Query Frame = 3 Query: 87 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHG 236 KIGINGFGRIGR V R L +VE+VA+ND + ++ KYD+VHG Sbjct: 3 KIGINGFGRIGRNVFRAALNNSEVEVVAIND-LTDAKTLAHLLKYDTVHG 51 HSP 2 Score: 54.6842 bits (130), Expect = 2.227e-17 Identity = 29/79 (36.71%), Postives = 43/79 (54.43%), Query Frame = 2 Query: 266 DDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVV-GVNEHEY 499 ++ +++ K + V R+P ++PW++ G E VVESTG FT VIISAP+ D + VV GVN +Y Sbjct: 60 NENSIVVNGKEIKVIAERDPAQLPWSDYGVEVVVESTGRFTKKSDAEKHLGGSVKKVIISAPASDEDITVVMGVNHEQY 138
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3P_STRCO (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptomyces coelicolor GN=gap PE=3 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 4.892e-17 Identity = 31/80 (38.75%), Postives = 44/80 (55.00%), Query Frame = 2 Query: 269 DKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPM-FVVGVNEHEYKP 505 + T+ K + V RNP +IPW E G + V+ESTG+FT V+ISAP+KD + V+GVN+ +Y P Sbjct: 63 EDTITVDGKTIKVLSERNPADIPWGELGVDIVIESTGIFTKKADAEKHIAGGAKKVLISAPAKDEDITIVMGVNQDKYDP 142 HSP 2 Score: 46.595 bits (109), Expect = 4.892e-17 Identity = 24/52 (46.15%), Postives = 36/52 (69.23%), Query Frame = 3 Query: 84 VKIGINGFGRIGRLVARVILQRD-DVELVAVNDPFITTDYMTYMFKYDSVHG 236 +++GINGFGRIGR R +L++ D+E+VAVND T ++ KYD++ G Sbjct: 3 IRVGINGFGRIGRNYFRALLEQGADIEIVAVND-LGDTATTAHLLKYDTILG 53
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3P1_BACSU (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Bacillus subtilis GN=gapA PE=1 SV=2) HSP 1 Score: 56.9954 bits (136), Expect = 6.360e-17 Identity = 28/51 (54.90%), Postives = 36/51 (70.59%), Query Frame = 3 Query: 84 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHG 236 VK+GINGFGRIGR V R L +VE+VAVND + + ++ +YDSVHG Sbjct: 3 VKVGINGFGRIGRNVFRAALNNPEVEVVAVND-LTDANMLAHLLQYDSVHG 52 HSP 2 Score: 51.2174 bits (121), Expect = 6.360e-17 Identity = 29/79 (36.71%), Postives = 40/79 (50.63%), Query Frame = 2 Query: 266 DDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPM-FVVGVNEHEY 499 D L+ K + V R+P ++ W + G E VVESTG FT VIISAP+ + + V+GVNE +Y Sbjct: 61 DGNNLVVNGKTIEVSAERDPAKLSWGKQGVEIVVESTGFFTKRADAAKHLEAGAKKVIISAPANEEDITIVMGVNEDKY 139
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3P_CORGL (Glyceraldehyde-3-phosphate dehydrogenase OS=Corynebacterium glutamicum GN=gap PE=1 SV=2) HSP 1 Score: 57.3806 bits (137), Expect = 1.397e-16 Identity = 31/82 (37.80%), Postives = 41/82 (50.00%), Query Frame = 2 Query: 266 DDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVVGVNEHEYKPE 508 DD ++ G K + V+ R+P+ + WA + V+ESTG FT VIISAP S + FV GVN Y PE Sbjct: 62 DDDSITVGGKRIAVYAERDPKNLDWAAHNVDIVIESTGFFTDANAAKAHIEAGAKKVIISAPASNEDATFVYGVNHESYDPE 143 HSP 2 Score: 49.6766 bits (117), Expect = 1.397e-16 Identity = 25/52 (48.08%), Postives = 37/52 (71.15%), Query Frame = 3 Query: 84 VKIGINGFGRIGRLVARVILQR-DDVELVAVNDPFITTDYMTYMFKYDSVHG 236 +++GINGFGRIGR R +L+R DD+E+VAVND ++ + K+DS+ G Sbjct: 3 IRVGINGFGRIGRNFFRAVLERSDDLEVVAVND-LTDNKTLSTLLKFDSIMG 53
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3PB_PEA (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Pisum sativum GN=GAPB PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 2.343e-16 Identity = 34/89 (38.20%), Postives = 52/89 (58.43%), Query Frame = 2 Query: 251 ELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFVVGVNEHEYKPEL 511 E+K+ +++T+ KP+ V R+P ++PWAE G + V+E TGVF VII+AP+K D P +V+GVNE +Y E+ Sbjct: 142 EVKILNNETITVDGKPIKVVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVIGVNEQDYGHEV 230 HSP 2 Score: 38.1206 bits (87), Expect = 2.343e-16 Identity = 23/56 (41.07%), Postives = 34/56 (60.71%), Query Frame = 3 Query: 75 MGKVKIGINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMFKYDSVHG 236 + K+K+ INGFGRIGR R R D +E++ VND + +++ KYDS+ G Sbjct: 83 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVIVVNDSGGVKN-ASHLLKYDSMLG 137
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3PB_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Spinacia oleracea GN=GAPB PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 3.045e-16 Identity = 34/85 (40.00%), Postives = 49/85 (57.65%), Query Frame = 2 Query: 251 ELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFVVGVNEHEY 499 ++K+ D++T KP+ V R+P ++PWAE G + V+E TGVF VII+AP+K D P +VVGVNE +Y Sbjct: 141 DVKIIDNETFSIDGKPIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGSDIPTYVVGVNEKDY 225 HSP 2 Score: 39.2762 bits (90), Expect = 3.045e-16 Identity = 24/56 (42.86%), Postives = 33/56 (58.93%), Query Frame = 3 Query: 75 MGKVKIGINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMFKYDSVHG 236 + K+K+ INGFGRIGR R R D +++V VND T++ KYDS+ G Sbjct: 82 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG-GVKSATHLLKYDSILG 136
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3P_XANFL (Glyceraldehyde-3-phosphate dehydrogenase OS=Xanthobacter flavus GN=gap PE=3 SV=1) HSP 1 Score: 53.1434 bits (126), Expect = 6.737e-16 Identity = 27/53 (50.94%), Postives = 38/53 (71.70%), Query Frame = 3 Query: 84 VKIGINGFGRIGRLVARVILQ--RDDVELVAVNDPFITTDYMTYMFKYDSVHG 236 VK+ INGFGRIGR V R I++ R D+E+VA+ND + ++F++DSVHG Sbjct: 3 VKVAINGFGRIGRNVLRAIIESGRTDIEVVAIND-LGPVETNAHLFRFDSVHG 54 HSP 2 Score: 51.6026 bits (122), Expect = 6.737e-16 Identity = 32/87 (36.78%), Postives = 44/87 (50.57%), Query Frame = 2 Query: 251 ELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVV-GVNEHEYKPE 508 E+KV D T+ G P+ V VRNP E+P E G + +E TG+FT V++SAP+ A + VV GVN + E Sbjct: 59 EVKVAGD-TIDVGRGPIKVTAVRNPAELPHKELGVDIALECTGIFTSRDKAAAHLAAGAKRVLVSAPADGADLTVVYGVNHEKLTNE 144
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3P2_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap2 PE=3 SV=2) HSP 1 Score: 58.5362 bits (140), Expect = 1.138e-15 Identity = 29/79 (36.71%), Postives = 41/79 (51.90%), Query Frame = 2 Query: 266 DDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAP-MFVVGVNEHEY 499 DD ++ K + RNPE +PW E + ++ESTGVFT V+I+AP K+ FV+GVN H+Y Sbjct: 63 DDNSITVNGKTIKCVSDRNPENLPWKEWEIDLIIESTGVFTSKEGALKHVNAGAKKVLITAPGKNEDGTFVIGVNHHDY 141 HSP 2 Score: 45.4394 bits (106), Expect = 1.138e-15 Identity = 28/55 (50.91%), Postives = 38/55 (69.09%), Query Frame = 3 Query: 84 VKIGINGFGRIGRLVARVILQRD--DVELVAVNDPFITTDYMT--YMFKYDSVHG 236 +++ INGFGRIGR AR L R+ ++ELVAVND T+D T ++ KYDS+ G Sbjct: 2 IRVAINGFGRIGRNFARCWLGRENSNIELVAVND---TSDPRTNAHLLKYDSMLG 53
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3P_THEAQ (Glyceraldehyde-3-phosphate dehydrogenase OS=Thermus aquaticus GN=gap PE=1 SV=2) HSP 1 Score: 60.077 bits (144), Expect = 1.139e-15 Identity = 33/81 (40.74%), Postives = 43/81 (53.09%), Query Frame = 2 Query: 266 DDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPM-FVVGVNEHEYKP 505 DD+ L K + V++P+EIPWAE G V+ESTGVFT VII+AP+K + V+GVN Y P Sbjct: 58 DDQYLYVDGKAIRATAVKDPKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAKGEDITIVMGVNHEAYDP 138 HSP 2 Score: 43.8986 bits (102), Expect = 1.139e-15 Identity = 22/50 (44.00%), Postives = 33/50 (66.00%), Query Frame = 3 Query: 84 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVH 233 +K+GINGFGRIGR V R++ R VE+ +ND + ++ KYDS++ Sbjct: 1 MKVGINGFGRIGRQVFRILHSR-GVEVALIND-LTDNKTLAHLLKYDSIY 48 The following BLAST results are available for this feature:
BLAST of FC930820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930820 ID=FC930820; Name=FC930820; organism=Citrus clementina; type=EST; length=511bpback to top |