FC930820
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3P_ESCBL (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Escherichia blattae GN=gap PE=3 SV=1) HSP 1 Score: 50.0618 bits (118), Expect = 7.946e-13 Identity = 29/83 (34.94%), Postives = 43/83 (51.81%), Query Frame = 2 Query: 254 LKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDA-PMFVVGVNEHEY 499 ++VKD ++ G+K + V R+P + W E G E V E+TG+F V+++ PSKD+ PMFV G N Y Sbjct: 43 VEVKDGHLIVNGKK-IRVTAERDPANLKWNEAGVEVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDSTPMFVRGANFDTY 124 HSP 2 Score: 44.2838 bits (103), Expect = 7.946e-13 Identity = 19/38 (50.00%), Postives = 26/38 (68.42%), Query Frame = 3 Query: 123 LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHG 236 +V R +R D+E+VA+ND + +YM YM KYDS HG Sbjct: 1 IVFRAAQERSDIEIVAIND-LLDAEYMAYMLKYDSTHG 37
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3P2_RHOSH (Glyceraldehyde-3-phosphate dehydrogenase B OS=Rhodobacter sphaeroides GN=gapB PE=3 SV=1) HSP 1 Score: 48.9062 bits (115), Expect = 1.028e-12 Identity = 24/53 (45.28%), Postives = 37/53 (69.81%), Query Frame = 3 Query: 84 VKIGINGFGRIGRLVARVILQ--RDDVELVAVNDPFITTDYMTYMFKYDSVHG 236 +++ INGFGRIGR V R I++ R D+E+VA+ND + ++ ++DSVHG Sbjct: 3 IRVAINGFGRIGRNVLRAIVESGRTDIEVVAIND-LGQVETNAHLLRFDSVHG 54 HSP 2 Score: 45.0542 bits (105), Expect = 1.028e-12 Identity = 25/68 (36.76%), Postives = 34/68 (50.00%), Query Frame = 2 Query: 287 GEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVV-GVN 487 G P+ V +RNP E+PWA G + +E TG+FT V++SAP A +V GVN Sbjct: 70 GRGPIKVTAIRNPAELPWA--GVDMAMECTGIFTTKEKAAAHLQNGAKRVLVSAPCDGADRTIVYGVN 135
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3P_SEROD (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Serratia odorifera GN=gap PE=3 SV=1) HSP 1 Score: 49.6766 bits (117), Expect = 1.032e-12 Identity = 27/83 (32.53%), Postives = 43/83 (51.81%), Query Frame = 2 Query: 254 LKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNEHEY 499 ++VKD ++ G+ + V ++P + W E G + V E+TG+F V+++ PSK D PMFV+GVN Y Sbjct: 43 VEVKDGHLVVNGQT-IRVTAEKDPANLKWNEVGVDVVAEATGIFLTDETARKHIAAGAKKVVLTGPSKDDTPMFVMGVNLKSY 124 HSP 2 Score: 44.2838 bits (103), Expect = 1.032e-12 Identity = 19/38 (50.00%), Postives = 26/38 (68.42%), Query Frame = 3 Query: 123 LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHG 236 +V R +R D+E+VA+ND + +YM YM KYDS HG Sbjct: 1 IVFRAAQERSDIEIVAIND-LLDAEYMAYMLKYDSTHG 37
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3P_SERMA (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Serratia marcescens GN=gap PE=3 SV=1) HSP 1 Score: 49.6766 bits (117), Expect = 1.032e-12 Identity = 28/83 (33.73%), Postives = 43/83 (51.81%), Query Frame = 2 Query: 254 LKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDA-PMFVVGVNEHEY 499 ++VKD ++ G K + V ++P + W E G + V E+TG+F V+++ PSKDA PMFV G N +Y Sbjct: 43 VEVKDGHLVVNG-KTIRVTAEKDPANLKWNEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDATPMFVRGANFDKY 124 HSP 2 Score: 44.2838 bits (103), Expect = 1.032e-12 Identity = 19/38 (50.00%), Postives = 26/38 (68.42%), Query Frame = 3 Query: 123 LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHG 236 +V R +R D+E+VA+ND + +YM YM KYDS HG Sbjct: 1 IVFRAAQERSDIEIVAIND-LLDAEYMAYMLKYDSTHG 37
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3PA_SCEVA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Scenedesmus vacuolatus GN=GapA PE=2 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 1.337e-12 Identity = 31/86 (36.05%), Postives = 46/86 (53.49%), Query Frame = 2 Query: 251 ELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFVVGVNEHEYK 502 ++K+ DD + K + V R+P ++PW E + V+E TGVF V+I+AP+K D P +VVGVN H+YK Sbjct: 52 DVKIVDDGHISVNGKSIRVVSSRDPTKLPWGEMEIDLVIEGTGVFIDTPGASKHIEAGAKKVLITAPAKGSDIPTYVVGVNAHDYK 137 HSP 2 Score: 32.3426 bits (72), Expect = 1.337e-12 Identity = 19/48 (39.58%), Postives = 28/48 (58.33%), Query Frame = 3 Query: 99 NGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMFKYDSVHG 236 NGFGRIGR R + R + +E++A+ND +++ KYDS G Sbjct: 1 NGFGRIGRNFLRCLETRQNSLLEVIAINDSG-GVKQASHLLKYDSTLG 47
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3P_STRAU (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptomyces aureofaciens GN=gap PE=3 SV=1) HSP 1 Score: 49.6766 bits (117), Expect = 1.733e-12 Identity = 27/83 (32.53%), Postives = 40/83 (48.19%), Query Frame = 2 Query: 266 DDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPM-FVVGVNEHEYKPEL 511 + L+ + +TV R P +PWAE G + V+E+TG FT V++SAP+ A + GVN Y P+L Sbjct: 61 EGNVLVVDGRRITVTAEREPANLPWAELGVDIVLEATGRFTSAKAARAHLDAGAKKVLVSAPADGADITLAFGVNTDAYDPDL 143 HSP 2 Score: 43.5134 bits (101), Expect = 1.733e-12 Identity = 24/51 (47.06%), Postives = 33/51 (64.71%), Query Frame = 3 Query: 87 KIGINGFGRIGRLVARVILQRD-DVELVAVNDPFITTDYMTYMFKYDSVHG 236 +I INGFGRIGR V R +L+RD D+++VAVND + + YD+ G Sbjct: 3 RIAINGFGRIGRNVLRALLERDSDLDVVAVND-LTEPATLARLLAYDTTSG 52
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3P3_ECO57 (Glyceraldehyde-3-phosphate dehydrogenase C OS=Escherichia coli O157:H7 GN=gapC PE=3 SV=1) HSP 1 Score: 49.6766 bits (117), Expect = 1.733e-12 Identity = 24/51 (47.06%), Postives = 38/51 (74.51%), Query Frame = 3 Query: 87 KIGINGFGRIGRLVARVILQ-RDDVELVAVNDPFITTDYMTYMFKYDSVHG 236 K+GINGFGRIGRLV R +L+ + ++++VA+ND + + Y+ K+DS +G Sbjct: 3 KVGINGFGRIGRLVLRRLLEVKSNIDVVAIND-LTSPKILAYLLKHDSNYG 52 HSP 2 Score: 43.5134 bits (101), Expect = 1.733e-12 Identity = 22/74 (29.73%), Postives = 35/74 (47.30%), Query Frame = 2 Query: 269 DKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNE 490 + +L+ K + V+ + + IPW GAE +VE TG +T V+ISAP+ + V VN+ Sbjct: 62 EDSLIVDGKSIAVYAEKEAKNIPWKAKGAEIIVECTGFYTSAEKSQAHLDAGAKKVLISAPAGEMKTIVYKVND 135
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3P1_ESCVU (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Escherichia vulneris GN=gap PE=3 SV=1) HSP 1 Score: 49.2914 bits (116), Expect = 1.741e-12 Identity = 28/83 (33.73%), Postives = 42/83 (50.60%), Query Frame = 2 Query: 254 LKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFVVGVNEHEY 499 ++VKD ++ G+K + V R+P + W E G + V E+TG+F V+++ PSKD PMFV G N Y Sbjct: 43 VEVKDGHLVVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDNTPMFVRGANFDTY 124 HSP 2 Score: 43.8986 bits (102), Expect = 1.741e-12 Identity = 19/38 (50.00%), Postives = 26/38 (68.42%), Query Frame = 3 Query: 123 LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHG 236 +V R +R D+E+VA+ND + +YM YM KYDS HG Sbjct: 1 IVFRAAQKRSDIEIVAIND-LLDAEYMAYMLKYDSTHG 37
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3P3_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Anabaena sp. (strain PCC 7120) GN=gap3 PE=2 SV=1) HSP 1 Score: 46.595 bits (109), Expect = 2.250e-12 Identity = 22/52 (42.31%), Postives = 32/52 (61.54%), Query Frame = 3 Query: 81 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHG 236 KV++GINGFGR+GRL R ++E V +N+ ++ K+DSVHG Sbjct: 2 KVRVGINGFGRMGRLALRAAWDWPELEFVHINEIKGGAVAAAHLLKFDSVHG 53 HSP 2 Score: 46.2098 bits (108), Expect = 2.250e-12 Identity = 24/87 (27.59%), Postives = 47/87 (54.02%), Query Frame = 2 Query: 251 ELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPM-FVVGVNEHEYKPE 508 E++ + ++ L+ G P++ P+++PW + G + V+E +G F VI++AP K+ + V+GVN++ Y+PE Sbjct: 58 EVEAEGERVLIDGT-PLSFSEYGKPDDVPWEDFGVDLVLECSGKFRTPATLDPYFKRGVQKVIVAAPVKEEALNIVMGVNDYLYEPE 143
BLAST of FC930820 vs. ExPASy Swiss-Prot
Match: G3PA_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPA PE=2 SV=1) HSP 1 Score: 54.6842 bits (130), Expect = 2.908e-12 Identity = 28/73 (38.36%), Postives = 37/73 (50.68%), Query Frame = 2 Query: 293 KPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNEHEYKPE 508 K + V RNP +PW + G + V+E TGVF V+I+AP K D P +VVGVN Y P+ Sbjct: 128 KVIQVVSDRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADLYNPD 200 HSP 2 Score: 37.7354 bits (86), Expect = 2.908e-12 Identity = 22/57 (38.60%), Postives = 33/57 (57.89%), Query Frame = 3 Query: 72 IMGKVKIGINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMFKYDSVHG 236 + K+K+ INGFGRIGR R R D ++++A+ND +++ KYDS G Sbjct: 54 VEAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDTG-GVKQASHLLKYDSTLG 109 The following BLAST results are available for this feature:
BLAST of FC930820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930820 ID=FC930820; Name=FC930820; organism=Citrus clementina; type=EST; length=511bpback to top |