FC930821
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: SPS19_YEAST (Peroxisomal 2,4-dienoyl-CoA reductase SPS19 OS=Saccharomyces cerevisiae GN=SPS19 PE=1 SV=4) HSP 1 Score: 70.8626 bits (172), Expect = 7.066e-12 Identity = 60/188 (31.91%), Postives = 92/188 (48.94%), Query Frame = 1 Query: 1 EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYT-ISKYGILGLVKCLAAELGQYGIRVNCVSPYGL--ATGMSMKGG---VDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 546 +V N V V KFGK+D + AG + + + +++++ +G F AK A + + KG ILF SA G+ + +K GI L K LA ELG GIR NC++P + G+ G + AL + + ++G+ T IA + +Y+ S +SYV+G LVVDGG Sbjct: 91 QVENAVKKTVEKFGKIDFVI--AGAAGNFVCDFANLSPNAFKSVVDIDLLGSFNTAK-ACLKELKKSKGSILFV-SATFHYYGVPFQGHVGAAKAGIDALAKNLAVELGPLGIRSNCIAPGAIDNTEGLKRLAGKKYKEKALAKIPLQRLGS-------TRDIAESTVYIFSPAASYVTGTVLVVDGG 267
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: FABG_VIBHA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Vibrio harveyi GN=fabG PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.066e-12 Identity = 49/173 (28.32%), Postives = 83/173 (47.98%), Query Frame = 1 Query: 40 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 558 G +DI+ NNAGI + ++ + +IN N + +K R ++ ++ G I+ S + G Y +K G++G K +A E+ G+ VN V+P + T M+ D S G L IA+A ++LAS E++Y++G+ L V+GG +V Sbjct: 78 GAIDILVNNAGITRDNL--LMRMKDDEWNDIINTNLTPIYRMSKAVLRGMMKKRAGRIINVGSVVGTMGNAGQTNYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDDQRAATLSNVPAGRLGDP----REIASAVVFLASPEAAYITGETLHVNGGMYMV 244
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: FOX2_YEAST (Peroxisomal hydratase-dehydrogenase-epimerase OS=Saccharomyces cerevisiae GN=FOX2 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.205e-11 Identity = 54/180 (30.00%), Postives = 93/180 (51.67%), Query Frame = 1 Query: 13 LVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 549 +++TA+ +FG++D++ NNAGIL D SF + + + +++V+ GG+ ++ A + Q+ G I+ TAS G Y+ +K G++GL + LA E +Y I VN ++P LA + + P +++ Q+G K I LYL + ES+ VS + GF Sbjct: 83 IIETAIKEFGRVDVLINNAGILRDVSFAKMTER---EFASVVDVHLTGGYKLSRAAWPYMRSQKFGRIINTASPAGLFGNFGQANYSAAKMGLVGLAETLAKEGAKYNINVNSIAP--LARSRMTENVLPPHILK----QLGPEK--------IVPLVLYL-THESTKVSNSIFELAAGF 244
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: FABG_VIBCH (3-oxoacyl-[acyl-carrier-protein] reductase OS=Vibrio cholerae GN=fabG PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.205e-11 Identity = 50/187 (26.74%), Postives = 96/187 (51.34%), Query Frame = 1 Query: 1 EVINLVDTAVS-KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 558 E I V A++ +FG +DI+ NNAGI + ++ + + ++ N F +K R ++ +++G I+ S + G Y +K G++G K +A E+ G+ VN V+P + T M+ ++ ++++Q+ G IA+A +LAS E++Y++G+ L V+GG ++ Sbjct: 64 ESIEAVLKAITDEFGGVDILVNNAGITRDNL--LMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTK--ALNDEQRTATLAQVP--AGRLGDPREIASAVAFLASPEAAYITGETLHVNGGMYMI 244
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: YUXG_BACSU (Uncharacterized oxidoreductase yuxG OS=Bacillus subtilis GN=yuxG PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.574e-11 Identity = 57/194 (29.38%), Postives = 92/194 (47.42%), Query Frame = 1 Query: 1 EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKG-CILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG-----------GVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 546 +V + + A +G +DI+ NNAG+ S +T + +NV G FL A+ A + + Q +G ++F S + AG + AY+ K L +C+AAE G++GIRVN V P + G ++ G G++P +E + L D IA A + AS ++ +G + VDGG Sbjct: 492 DVQSAFERAALAYGGIDIVVNNAGLATSS--PFDETSLKEWNLNMNVLGTGYFLVAREAFKQMKHQNRGGSMVFVGSKNSVYAGKNASAYSSVKALETHLARCIAAEGGEFGIRVNSVLPDAVLQGSAIWGSSWREERAAAYGIEPDQLEEHYRKRTALLVNIYPED-IAEAIAFFASSKAEKTTGCMITVDGG 682
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: YQC8_SCHPO (Uncharacterized oxidoreductase C1739.08c OS=Schizosaccharomyces pombe GN=SPCC1739.08c PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.574e-11 Identity = 54/177 (30.51%), Postives = 88/177 (49.72%), Query Frame = 1 Query: 37 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGS--PAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLAT---GMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 552 F ++ ++ NAG+ R S+LD+P + E+++N+NT + A + ++ Q G ++ TAS I AY SK + L K LA E ++ R+N VSP AT G +P + + L+G +L YLAS+ SS+V+G +L+VDGG++ Sbjct: 96 FKEIHVVVANAGMPFRR--SVLDSPPHEFEKVMNINTNSVYRVAYYMGKIFKKQGFGNLIATASMSATIVNAPQHIAAYCASKAAVRQLCKALAVEWAEFA-RINSVSPGYFATDMPGYEFLKQWEPYVPFKRLGLTPELRGTYL----------YLASNASSFVTGLDLIVDGGYT 259
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: SRLD_ECOLI (Sorbitol-6-phosphate 2-dehydrogenase OS=Escherichia coli (strain K12) GN=srlD PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.574e-11 Identity = 54/180 (30.00%), Postives = 92/180 (51.11%), Query Frame = 1 Query: 37 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCV-------SP--YGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 546 FG++D++ +AGI +F I D D +R + VN +G FL A+ +R+++ +G I+ S ++ + Y+ +K+G +GL + LA +L +YGI V+ + SP L + K G+ P +E LK D + N L+ AS ++SY +GQ++ V GG Sbjct: 79 FGRVDLLVYSAGIAKAAF--ISDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDKVPLKRGCDYQD-VLNMLLFYASPKASYCTGQSINVTGG 255
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: NODG_RHIS3 (Nodulation protein G OS=Rhizobium sp. (strain N33) GN=nodG PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.574e-11 Identity = 54/187 (28.88%), Postives = 94/187 (50.27%), Query Frame = 1 Query: 1 EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK-GEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 558 EV L A + +DI+ NNAGI G + +D + ++ VN F + ++ ++ G I+ S G Y SK G++G K LA E+ I VNCV+P + + M+ K ++ E+ M+ + + G ++ +A+A YLAS+E++YV+GQ + V+GG +++ Sbjct: 66 EVKALGQKAEADLEGVDILVNNAGITKD--GLFVRMSDADWDTVLEVNLTAVFRLTRELTHPMMRRRHGRIINITSVVGVTGNPGQTNYCASKAGMIGFSKSLAQEIATRNITVNCVAPGFIESAMTDK--LNDKQKEAIMAAIPTRRMGTSVE---VASAVAYLASNEAAYVTGQTIHVNGGLAMI 245
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: NODG_AZOBR (Nodulation protein G OS=Azospirillum brasilense GN=nodG PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.574e-11 Identity = 52/174 (29.89%), Postives = 86/174 (49.43%), Query Frame = 1 Query: 40 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSM--KGGVDPALIES-SMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 552 G +DI+ NNAGI F + +D K+ + +I N F + + + + G I+ +S G Y+ +K G++G K LAAEL G+ VN ++P + T M M + + A+ +S M ++G + D I A YLAS+ + YV+G L ++GG + Sbjct: 80 GPVDILVNNAGITRDKFFAKMD--KAQWDAVIATNLSSLFNVTQQVSPKMAERGWGRIINISSVNGVKGQAGQTNYSAAKAGVIGFTKALAAELATKGVTVNAIAPGYIGTDMVMAIREDIRQAITDSVPMKRLG-------RPDEIGGAVSYLASEIAGYVTGSTLNINGGLN 244
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: NAHB_PSEPU (1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase OS=Pseudomonas putida GN=nahB PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.574e-11 Identity = 56/193 (29.02%), Postives = 86/193 (44.56%), Query Frame = 1 Query: 13 LVDTAVSKFGKLDIMYNNAGILDR--SFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK---------GEFLKTDGIANAALYLAS-DESSYVSGQNLVVDGGFSV 555 L+ + +FG LD NAGI D S + S + + ++N F G AA + + G ++ TAS + G G Y SK+ +LG+VK LA EL +RVN VSP G T S+ G + M M + G K + + L LAS + +++G + +DGG ++ Sbjct: 68 LIKQTIDRFGHLDCFIANAGIWDYMLSIEEPWEKISSSFDEIFDINVKSYFSGIS-AALPELKKTNGSVVMTASVSSHAVGGGGSCYIASKHAVLGMVKALAYELAP-EVRVNAVSPGGTVT--SLCGSASAGFDKMHMKDMPGIDDMIKGLTPLGFAAKPEDVVAPYLLLASRKQGKFITGTVISIDGGMAL 256 The following BLAST results are available for this feature:
BLAST of FC930821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 173
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930821 ID=FC930821; Name=FC930821; organism=Citrus clementina; type=EST; length=672bpback to top |