FC930821

Overview
NameFC930821
Unique NameFC930821
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15221 contig Ccv1_Contig15221:1..672. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: BDHA_RHIME (D-beta-hydroxybutyrate dehydrogenase OS=Rhizobium meliloti GN=bdhA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.529e-17
Identity = 61/196 (31.12%), Postives = 101/196 (51.53%), Query Frame = 1
Query:    1 EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQK----GCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPA----LIESSMSQMGNLKGE----FLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 552
            E+ +++     +FG  DI+ NNAG+  +    I D P    +R+I VN    F    H  R  +P  K    G I+  ASA   +A     AY  +K+GI+GL K +A E+ + G+ VN + P  + T +  K   D A    + E  +     LKG+    F+  + +A+ ALYLA D+++ ++G ++ +DGG++
Sbjct:   67 EIADMMAMVADRFGGADILVNNAGV--QFVEKIEDFPVEQWDRIIAVNLSSSF----HTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGGWT 256          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: FABG_STAAW (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MW2) GN=fabG PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.244e-16
Identity = 56/182 (30.77%), Postives = 95/182 (52.20%), Query Frame = 1
Query:    1 EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 546
            EV  ++   VS+FG LD++ NNAGI   +   ++   + + + +I+ N  G F   + A   ++ Q+ G I+  +S    +   G   Y  +K G++GL K  A EL   GI VN V+P  + + M+    +   L E  ++Q+      F +   IAN   +LASD++ Y++GQ + V+GG
Sbjct:   68 EVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMT--DALSDELKEQMLTQIP--LARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG 243          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: FABG_STAAS (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MSSA476) GN=fabG PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.244e-16
Identity = 56/182 (30.77%), Postives = 95/182 (52.20%), Query Frame = 1
Query:    1 EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 546
            EV  ++   VS+FG LD++ NNAGI   +   ++   + + + +I+ N  G F   + A   ++ Q+ G I+  +S    +   G   Y  +K G++GL K  A EL   GI VN V+P  + + M+    +   L E  ++Q+      F +   IAN   +LASD++ Y++GQ + V+GG
Sbjct:   68 EVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMT--DALSDELKEQMLTQIP--LARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG 243          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: FABG_STAAR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MRSA252) GN=fabG PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.244e-16
Identity = 56/182 (30.77%), Postives = 95/182 (52.20%), Query Frame = 1
Query:    1 EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 546
            EV  ++   VS+FG LD++ NNAGI   +   ++   + + + +I+ N  G F   + A   ++ Q+ G I+  +S    +   G   Y  +K G++GL K  A EL   GI VN V+P  + + M+    +   L E  ++Q+      F +   IAN   +LASD++ Y++GQ + V+GG
Sbjct:   68 EVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMT--DALSDELKEQMLTQIP--LARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG 243          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: FABG_STAAN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain N315) GN=fabG PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.244e-16
Identity = 56/182 (30.77%), Postives = 95/182 (52.20%), Query Frame = 1
Query:    1 EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 546
            EV  ++   VS+FG LD++ NNAGI   +   ++   + + + +I+ N  G F   + A   ++ Q+ G I+  +S    +   G   Y  +K G++GL K  A EL   GI VN V+P  + + M+    +   L E  ++Q+      F +   IAN   +LASD++ Y++GQ + V+GG
Sbjct:   68 EVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMT--DALSDELKEQMLTQIP--LARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG 243          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: FABG_STAAM (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=fabG PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.244e-16
Identity = 56/182 (30.77%), Postives = 95/182 (52.20%), Query Frame = 1
Query:    1 EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 546
            EV  ++   VS+FG LD++ NNAGI   +   ++   + + + +I+ N  G F   + A   ++ Q+ G I+  +S    +   G   Y  +K G++GL K  A EL   GI VN V+P  + + M+    +   L E  ++Q+      F +   IAN   +LASD++ Y++GQ + V+GG
Sbjct:   68 EVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMT--DALSDELKEQMLTQIP--LARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG 243          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: FABG_STAAC (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain COL) GN=fabG PE=3 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.244e-16
Identity = 56/182 (30.77%), Postives = 95/182 (52.20%), Query Frame = 1
Query:    1 EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 546
            EV  ++   VS+FG LD++ NNAGI   +   ++   + + + +I+ N  G F   + A   ++ Q+ G I+  +S    +   G   Y  +K G++GL K  A EL   GI VN V+P  + + M+    +   L E  ++Q+      F +   IAN   +LASD++ Y++GQ + V+GG
Sbjct:   68 EVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMT--DALSDELKEQMLTQIP--LARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG 243          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: FABG5_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 5, chloroplastic (Fragment) OS=Brassica napus GN=bkr1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.244e-16
Identity = 58/187 (31.02%), Postives = 102/187 (54.55%), Query Frame = 1
Query:    1 EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK-GEFLKTDGIANAALYLA-SDESSYVSGQNLVVDGGFSV 555
            +V +++ TAV K+G +D++ NNAGI   +   ++   KS  + +I++N  G FL  + A ++++ ++KG I+  AS    I  +G   Y  +K G++G  K  A E     I VN V P  +A+ M+ K G D   +E  +  +G +  G + + + +A    +LA S  SSY++G    + GGF++
Sbjct:  138 DVDSMMKTAVDKWGTIDVVVNNAGITRDTL--LIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGED---MEKKI--LGTIPLGRYGQPEYVAGLVEFLALSPASSYITGHTFSIHGGFAI 317          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: BAIA1_EUBSP (Bile acid 7-dehydroxylase 1/3 OS=Eubacterium sp. (strain VPI 12708) GN=baiA1 PE=1 SV=3)

HSP 1 Score: 86.6557 bits (213), Expect = 1.244e-16
Identity = 60/182 (32.97%), Postives = 96/182 (52.75%), Query Frame = 1
Query:    4 VINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 549
            V+  V T   K+G+LD+M NNAGI   S  S +   + D + ++++N  G F GA  A + +   ++G I+ TAS       L    Y  SK G++GL   L  E+ +  IRV  V+P  + T M+   G+ P ++E  +  +   +   LK + IAN  L+LASD +S ++   + VDG +
Sbjct:   72 VMAAVGTVAQKYGRLDVMINNAGITMNSVFSRVS--EEDFKNIMDINVNGVFNGAWSAYQCMKDAKQGVIINTASVTGIYGSLSGIGYPTSKAGVIGLTHGLGREIIRKNIRVVGVAPGVVDTDMTK--GLPPEILEDYLKTLPMKR--MLKPEEIANVYLFLASDLASGITATTISVDGAY 247          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: FABG_CHLPN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia pneumoniae GN=fabG PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.625e-16
Identity = 60/194 (30.93%), Postives = 93/194 (47.94%), Query Frame = 1
Query:    4 VINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM--GNLKGEFLKT---------DGIANAALYLASDESSYVSGQNLVVDGGFS 552
            V + V   + K  K+DI+ NNAGI   +   ++   + D + +I+ N    +       R ++  + G I+  AS   +I   G   Y  +K GI+   K LA E+    IRVNC++               P  IE+ M+ +   NLK E+LK+         + +A  AL+LAS  SSY++ Q LVVDGG +
Sbjct:   71 VKDCVQKFLDKHNKIDILVNNAGITRDNL--LMRMSEDDWQSVISTNLTSLYYTCSSVIRHMIKARSGSIINVASIVAKIGSAGQTNYAAAKAGIIAFTKSLAKEVAARNIRVNCLA---------------PGFIETDMTSVLNDNLKAEWLKSIPLGRAGTPEDVARVALFLASQLSSYMTAQTLVVDGGLT 247          
The following BLAST results are available for this feature:
BLAST of FC930821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 173
Match NameE-valueIdentityDescription
BDHA_RHIME9.529e-1731.12D-beta-hydroxybutyrate dehydrogenase OS=Rhizobium ... [more]
FABG_STAAW1.244e-1630.773-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAS1.244e-1630.773-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAR1.244e-1630.773-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAN1.244e-1630.773-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAM1.244e-1630.773-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAC1.244e-1630.773-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG5_BRANA1.244e-1631.023-oxoacyl-[acyl-carrier-protein] reductase 5, chlo... [more]
BAIA1_EUBSP1.244e-1632.97Bile acid 7-dehydroxylase 1/3 OS=Eubacterium sp. (... [more]
FABG_CHLPN1.625e-1630.933-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]

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Properties
Property NameValue
Genbank descriptionC34109D06EF PostHarvP1 Citrus clementina cDNA clone C34109D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930821 ID=FC930821; Name=FC930821; organism=Citrus clementina; type=EST; length=672bp
GAAGTCATCAATCTCGTTGATACCGCCGTTTCTAAATTTGGAAAGCTCGA
TATCATGTACAACAATGCAGGAATTCTTGACCGCAGCTTTGGGAGCATTT
TGGACACTCCAAAGTCTGATCTAGAACGCTTAATTAATGTAAACACTATA
GGTGGTTTCTTAGGAGCCAAGCATGCTGCAAGAGTCGTGGTGCCACAGCA
AAAAGGTTGCATACTGTTTACAGCTAGTGCTTGTACAGAAATTGCAGGGC
TTGGCTCCCCTGCTTATACAATATCCAAATATGGGATTTTAGGACTAGTA
AAGTGCTTGGCAGCAGAGCTTGGACAGTATGGAATAAGAGTAAATTGCGT
CTCGCCTTATGGTTTGGCGACAGGAATGTCGATGAAAGGTGGGGTCGATC
CGGCTCTAATAGAATCATCAATGAGCCAGATGGGTAATCTAAAAGGGGAA
TTTCTAAAAACTGATGGCATTGCAAATGCTGCCCTCTATTTGGCTAGTGA
TGAATCAAGTTATGTGAGCGGGCAAAATCTTGTTGTGGATGGAGGATTCA
GCGTGGTGAATCCTACAGTTATGAGGGCTTACGGTCTTATCAAGTAATCA
ATTGGAGCTTTAATTTGTAGATAATGGGGGATGCCGTACTCTGCTGCGTA
CGTGTAAGAATGCATTCATTTT
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