FC930832
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930832 vs. ExPASy Swiss-Prot
Match: RGL3_ARATH (DELLA protein RGL3 OS=Arabidopsis thaliana GN=RGL3 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.165e-25 Identity = 71/178 (39.89%), Postives = 104/178 (58.43%), Query Frame = 3 Query: 126 PSSDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPS-KTSLVTPSMLECRL-GEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDMN 653 PS + + M ++ CP KF AN AI+EA + VH+ID +NQG Q+ L+Q +A PG P RLTGV +P + + G+Q +G +L LA+A+GV F+F+ + + + S + P M E R E LVVN F+LH + +S ++LL VK++ P LVTVVEQ+ N Sbjct: 221 PSFEEILQMNF-YDSCPYLKFAHFTANQAILEAVTTSRVVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGVGNPSNRE----GIQELGWKLAQLAQAIGVEFKFNGLTTERLSDLEPDMFETRTESETLVVNSVFELHPV----LSQPGSIEKLLATVKAVKPGLVTVVEQEAN 389
BLAST of FC930832 vs. ExPASy Swiss-Prot
Match: RGL2_ARATH (DELLA protein RGL2 OS=Arabidopsis thaliana GN=RGL2 PE=1 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 2.828e-25 Identity = 71/178 (39.89%), Postives = 101/178 (56.74%), Query Frame = 3 Query: 126 PSSDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKT-SLVTPSMLECR-LGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDMN 653 PS + + M +E CP KF AN AI+EA +RVH+ID +NQG Q+ L+Q +A PG P RLTG+ P++ LQ +G +L A+ +GV FEF + +++ S + P M E R E LVVN F+LH + S S ++LL VK++ P +VTVVEQ+ N Sbjct: 248 PSFEEVLEMHF-YESCPYLKFAHFTANQAILEAVTTARRVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGIGPPQTENS--DSLQQLGWKLAQFAQNMGVEFEFKGLAAESLSDLEPEMFETRPESETLVVNSVFELHRLLARSGSI----EKLLNTVKAIKPSIVTVVEQEAN 418
BLAST of FC930832 vs. ExPASy Swiss-Prot
Match: GAIP_CUCMA (DELLA protein GAIP OS=Cucurbita maxima GN=GAIP PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.828e-25 Identity = 71/173 (41.04%), Postives = 100/173 (57.80%), Query Frame = 3 Query: 162 FEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHA-VPSKTSLVTPSMLECRLG--EALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDMNTTLPHF 671 +E CP KF AN AI+EAF+G+KRVH+IDF +NQG Q+ LIQ +A P P RLTG+ P LQ +G +L AE L V FE+ V + + + SMLE R E++VVN F+LH + ++ +++L +VK + P++VTVVEQ+ N P F Sbjct: 285 YESCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGIQWPALIQALALRPSGPPTFRLTGIGPPAPDNS--DYLQDVGWKLVKFAETLHVEFEYRGFVANSLADLDASMLELRPSEVESVVVNSVFELHQL----LARPGAIEKVLSVVKQMKPEIVTVVEQEANHNGPVF 451
BLAST of FC930832 vs. ExPASy Swiss-Prot
Match: GAI_SOLLC (DELLA protein GAI OS=Solanum lycopersicum GN=GAI PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.693e-25 Identity = 65/167 (38.92%), Postives = 97/167 (58.08%), Query Frame = 3 Query: 162 FEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHA-VPSKTSLVTPSMLECRLG--EALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDMN 653 +E CP KF AN AI+EAF G +VH+IDF + QG Q+ L+Q +A PG P RLTG+ P+ LQ +G +L LAE +GV FEF V + + + ++L+ R EA+ +N F+LH + +S +++L +K +NPK+VT+VEQ+ N Sbjct: 273 YETCPYLKFAHFTANQAILEAFTGCNKVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDN--TDALQQVGWKLAQLAETIGVEFEFRGFVANSLADLDATILDIRPSETEAVAINSVFELHRL----LSRPGAIEKVLNSIKQINPKIVTLVEQEAN 433
BLAST of FC930832 vs. ExPASy Swiss-Prot
Match: GAI_GOSHI (DELLA protein GAI OS=Gossypium hirsutum GN=GAI PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.403e-24 Identity = 69/187 (36.90%), Postives = 103/187 (55.08%), Query Frame = 3 Query: 120 EPPSSDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHA-VPSKTSLVTPSMLECRLG--EALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDMNTTLPHF 671 +P +D+L +E CP KF AN AI+EAF RVH+IDF + QG Q+ L+Q +A PG P RLTG+ P+ LQ +G +L LAE +G+ FEF V + + + P ML+ R E + VN F+LH + ++ ++++ +K++ PK+VTVVEQ+ N P F Sbjct: 233 DPSYNDKLQIP--FYETCPYLKFAHFTANQAILEAFSMASRVHVIDFGLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDN--TDALQQVGWKLAQLAERIGIEFEFRGFVANSLADLEPEMLDIRPPEIEVVAVNAVFELHPL----LARPGGIEKVVSSIKAMKPKIVTVVEQEANHNGPVF 411
BLAST of FC930832 vs. ExPASy Swiss-Prot
Match: SCR_MAIZE (Protein SCARECROW OS=Zea mays GN=SCR PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 4.022e-24 Identity = 71/171 (41.52%), Postives = 94/171 (54.97%), Query Frame = 3 Query: 144 AAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVTPSMLECRLGEALVVNFAFQLHHMPDESVSTVNQRD-QLLRMVKSLNPKLVTVVEQDMN 653 AA Q+ + P KF AN AI EAF+ E+RVHIID DI QG Q+ L +AS PG P +RLTG+ + L+ G RL A+ LG+PFEF AV K V P L EA+ V++ LHH S+ V D L +++ L PK+VT+VEQD++ Sbjct: 378 AAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPRVRLTGLG------ASMEALEATGKRLSDFADTLGLPFEFCAVAEKAGNVDPEKLGVTRREAVAVHW---LHH----SLYDVTGSDSNTLWLIQRLAPKVVTMVEQDLS 535 HSP 2 Score: 25.7942 bits (55), Expect = 4.022e-24 Identity = 10/22 (45.45%), Postives = 15/22 (68.18%), Query Frame = 2 Query: 23 GDPPQRIAAYMVEGLAARMAAS 88 G QR+AAY E ++AR+ +S Sbjct: 333 GTSTQRVAAYFAEAMSARLVSS 354
BLAST of FC930832 vs. ExPASy Swiss-Prot
Match: GAI_ARATH (DELLA protein GAI OS=Arabidopsis thaliana GN=GAI PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.083e-24 Identity = 68/173 (39.31%), Postives = 98/173 (56.65%), Query Frame = 3 Query: 162 FEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKT-SLVTPSMLECRLG--EALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDMNTTLPHF 671 +E CP KF AN AI+EAF+G+KRVH+IDF ++QG Q+ L+Q +A PG P RLTG+ P L +G +L LAEA+ V FE+ + T + + SMLE R E++ VN F+LH + + D++L +V + P++ TVVEQ+ N P F Sbjct: 244 YETCPYLKFAHFTANQAILEAFQGKKRVHVIDFSMSQGLQWPALMQALALRPGGPPVFRLTGIGPPAPDN--FDYLHEVGCKLAHLAEAIHVEFEYRGFVANTLADLDASMLELRPSEIESVAVNSVFELHKL----LGRPGAIDKVLGVVNQIKPEIFTVVEQESNHNSPIF 410
BLAST of FC930832 vs. ExPASy Swiss-Prot
Match: GAIPB_CUCMA (DELLA protein GAIP-B OS=Cucurbita maxima GN=GAIPB PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.083e-24 Identity = 71/191 (37.17%), Postives = 106/191 (55.50%), Query Frame = 3 Query: 114 CKEPPSSDRLAAMQIL--FEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHA-VPSKTSLVTPSMLECRLG--EALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDMNTTLPHF 671 C E P ++ M L +E P KF AN AI+EAF+G+KRVH+IDF +NQG Q+ L+Q +A P P RLTG+ P LQ +G +L L E + V FE+ V + + + SMLE R E++VVN F+LH + ++ ++++ +VK + P+++TVVEQ+ N P F Sbjct: 274 CPENPLDHSMSDMLQLHFYESSPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGMQWPALLQALALRPSGPPAFRLTGIGPPAPDNS--DYLQDVGWKLAKLVETINVEFEYRGFVANSLADLDASMLELRPSEVESVVVNSVFELHKL----LARPGAIEKVMSVVKQMKPEIMTVVEQEANHNGPVF 458
BLAST of FC930832 vs. ExPASy Swiss-Prot
Match: RGA1_BRACM (DELLA protein RGA1 OS=Brassica campestris GN=RGA1 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.333e-24 Identity = 68/173 (39.31%), Postives = 97/173 (56.07%), Query Frame = 3 Query: 162 FEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHA-VPSKTSLVTPSMLECRLG--EALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDMNTTLPHF 671 +E CP KF AN AI+EAF+G+KRVH+IDF +NQG Q+ L+Q +A G P RLTG+ P + L +G +L LAEA+ V FE+ V + + + SMLE R EA+ VN F+LH + + +++ +VK + P + TVVEQ+ N P F Sbjct: 283 YETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGGPPSFRLTGIGPPAADNS--DHLHEVGCKLAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSETEAVAVNSVFELHKL----LGRTGGIEKVFGVVKQIKPVIFTVVEQESNHNGPVF 449
BLAST of FC930832 vs. ExPASy Swiss-Prot
Match: RGA_ARATH (DELLA protein RGA OS=Arabidopsis thaliana GN=RGA PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.965e-24 Identity = 69/173 (39.88%), Postives = 97/173 (56.07%), Query Frame = 3 Query: 162 FEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHA-VPSKTSLVTPSMLECRLG--EALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDMNTTLPHF 671 +E CP KF AN AI+EAF+G+KRVH+IDF +NQG Q+ L+Q +A G P RLTG+ P L +G +L LAEA+ V FE+ V + + + SMLE R EA+ VN F+LH + + +++L +VK + P + TVVEQ+ N P F Sbjct: 296 YETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGGPPTFRLTGIGPPAPDNS--DHLHEVGCKLAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSDTEAVAVNSVFELHKL----LGRPGGIEKVLGVVKQIKPVIFTVVEQESNHNGPVF 462 The following BLAST results are available for this feature:
BLAST of FC930832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930832 ID=FC930832; Name=FC930832; organism=Citrus clementina; type=EST; length=723bpback to top |