FC930832
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930832 vs. ExPASy Swiss-Prot
Match: RGA2_BRACM (DELLA protein RGA2 OS=Brassica campestris GN=RGA2 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.188e-23 Identity = 68/173 (39.31%), Postives = 98/173 (56.65%), Query Frame = 3 Query: 162 FEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHA-VPSKTSLVTPSMLECRLG--EALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDMNTTLPHF 671 +E CP KF AN AI+EAF+G+KRVH+IDF +NQG Q+ L+Q +A G P RLTG+ P + L +G +L LAEA+ V FE+ V + + + SMLE R EA+ VN F+LH + + +++L +VK + P + TVVEQ+ + P F Sbjct: 289 YETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGGPPVFRLTGIGPPAADNS--DHLHEVGCKLAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSEIEAVAVNSVFELHKL----LGRTGGIEKVLGVVKQIKPVIFTVVEQESSHNGPVF 455
BLAST of FC930832 vs. ExPASy Swiss-Prot
Match: SCL14_ARATH (Scarecrow-like protein 14 OS=Arabidopsis thaliana GN=SCL14 PE=2 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 5.896e-23 Identity = 63/190 (33.16%), Postives = 99/190 (52.11%), Query Frame = 3 Query: 105 ALKCKEPPSSDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIA-SLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVTPSMLECRLGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDMNTTLPHF 671 AL K+ ++D L A Q VCP K + AN +++ +HIIDF I+ G Q+ LI ++ S PG P LR+TG++ P+ R G+Q G RL + VPFE++A+ K + L+ R GE +VVN F+ ++ DE+V + RD +L++++ +NP + N P F Sbjct: 455 ALSSKKTSAADMLKAYQTYMSVCPFKKAAIIFANHSMMRFTANANTIHIIDFGISYGFQWPALIHRLSLSRPGGSPKLRITGIELPQRGFRPAEGVQETGHRLARYCQRHNVPFEYNAIAQKWETIQVEDLKLRQGEYVVVNSLFRFRNLLDETVLVNSPRDAVLKLIRKINPNVFIPAILSGNYNAPFF 644
BLAST of FC930832 vs. ExPASy Swiss-Prot
Match: SCR2_ORYSJ (Protein SCARECROW 2 OS=Oryza sativa subsp. japonica GN=SCR2 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 9.475e-23 Identity = 67/170 (39.41%), Postives = 92/170 (54.12%), Query Frame = 3 Query: 144 AAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVTPSMLECRLGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDMN 653 AA Q+ + P KF AN AI EAF+ E+RVHIID DI QG Q+ L +AS PG P +RLTG+ + L+ G RL A+ LG+PFEF V K + P L EA+ V++ H + D + S N L +++ L PK+VT+VEQD++ Sbjct: 371 AAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPRVRLTGLG------ASMEALEATGKRLSDFADTLGLPFEFCPVADKAGNLDPEKLGVTRREAVAVHWL--RHSLYDVTGSDSN----TLWLIQRLAPKVVTMVEQDLS 528 HSP 2 Score: 25.7942 bits (55), Expect = 9.475e-23 Identity = 10/22 (45.45%), Postives = 15/22 (68.18%), Query Frame = 2 Query: 23 GDPPQRIAAYMVEGLAARMAAS 88 G QR+AAY E ++AR+ +S Sbjct: 326 GTSTQRVAAYFAEAMSARLVSS 347
BLAST of FC930832 vs. ExPASy Swiss-Prot
Match: SCR2_ORYSI (Protein SCARECROW 2 OS=Oryza sativa subsp. indica GN=SCR2 PE=3 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 9.475e-23 Identity = 67/170 (39.41%), Postives = 92/170 (54.12%), Query Frame = 3 Query: 144 AAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVTPSMLECRLGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDMN 653 AA Q+ + P KF AN AI EAF+ E+RVHIID DI QG Q+ L +AS PG P +RLTG+ + L+ G RL A+ LG+PFEF V K + P L EA+ V++ H + D + S N L +++ L PK+VT+VEQD++ Sbjct: 371 AAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPRVRLTGLG------ASMEALEATGKRLSDFADTLGLPFEFCPVADKAGNLDPEKLGVTRREAVAVHWL--RHSLYDVTGSDSN----TLWLIQRLAPKVVTMVEQDLS 528 HSP 2 Score: 25.7942 bits (55), Expect = 9.475e-23 Identity = 10/22 (45.45%), Postives = 15/22 (68.18%), Query Frame = 2 Query: 23 GDPPQRIAAYMVEGLAARMAAS 88 G QR+AAY E ++AR+ +S Sbjct: 326 GTSTQRVAAYFAEAMSARLVSS 347
BLAST of FC930832 vs. ExPASy Swiss-Prot
Match: SCR1_ORYSI (Protein SCARECROW 1 OS=Oryza sativa subsp. indica GN=SCR1 PE=3 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 9.475e-23 Identity = 67/170 (39.41%), Postives = 92/170 (54.12%), Query Frame = 3 Query: 144 AAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVTPSMLECRLGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDMN 653 AA Q+ + P KF AN AI EAF+ E+RVHIID DI QG Q+ L +AS PG P +RLTG+ + L+ G RL A+ LG+PFEF V K + P L EA+ V++ H + D + S N L +++ L PK+VT+VEQD++ Sbjct: 370 AAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPRVRLTGLG------ASMEALEATGKRLSDFADTLGLPFEFCPVADKAGNLDPEKLGVTRREAVAVHWL--RHSLYDVTGSDSN----TLWLIQRLAPKVVTMVEQDLS 527 HSP 2 Score: 25.7942 bits (55), Expect = 9.475e-23 Identity = 10/22 (45.45%), Postives = 15/22 (68.18%), Query Frame = 2 Query: 23 GDPPQRIAAYMVEGLAARMAAS 88 G QR+AAY E ++AR+ +S Sbjct: 325 GTSTQRVAAYFAEAMSARLVSS 346
BLAST of FC930832 vs. ExPASy Swiss-Prot
Match: SCR1_ORYSJ (Protein SCARECROW 1 OS=Oryza sativa subsp. japonica GN=SCR1 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 9.477e-23 Identity = 67/170 (39.41%), Postives = 92/170 (54.12%), Query Frame = 3 Query: 144 AAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVTPSMLECRLGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDMN 653 AA Q+ + P KF AN AI EAF+ E+RVHIID DI QG Q+ L +AS PG P +RLTG+ + L+ G RL A+ LG+PFEF V K + P L EA+ V++ H + D + S N L +++ L PK+VT+VEQD++ Sbjct: 362 AAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPRVRLTGLG------ASMEALEATGKRLSDFADTLGLPFEFCPVADKAGNLDPEKLGVTRREAVAVHWL--RHSLYDVTGSDSN----TLWLIQRLAPKVVTMVEQDLS 519 HSP 2 Score: 25.7942 bits (55), Expect = 9.477e-23 Identity = 10/22 (45.45%), Postives = 15/22 (68.18%), Query Frame = 2 Query: 23 GDPPQRIAAYMVEGLAARMAAS 88 G QR+AAY E ++AR+ +S Sbjct: 317 GTSTQRVAAYFAEAMSARLVSS 338
BLAST of FC930832 vs. ExPASy Swiss-Prot
Match: SCL4_ARATH (Scarecrow-like protein 4 OS=Arabidopsis thaliana GN=SCL4 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 9.495e-23 Identity = 61/190 (32.11%), Postives = 100/190 (52.63%), Query Frame = 3 Query: 87 LASFSKALKCKEPPSSDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRP-HLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVTPSMLECRLGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDMN 653 L+ S A + D + + + L + CP KF + AN AI+EA + ++HI+DF I QG Q+ L+Q +A+ +P +R++G+ P + L G RL A+ L + F+F + + L+ S E L VNF QL+ + DE+ + V D LR+ KSLNP++VT+ E +++ Sbjct: 268 LSPNSPATSSSSSSTEDLILSYKTLNDACPYSKFAHLTANQAILEATEKSNKIHIVDFGIVQGIQWPALLQALATRTSGKPTQIRVSGIPAPSLGESPEPSLIATGNRLRDFAKVLDLNFDFIPILTPIHLLNGSSFRVDPDEVLAVNFMLQLYKLLDETPTIV---DTALRLAKSLNPRVVTLGEYEVS 454 HSP 2 Score: 28.4906 bits (62), Expect = 9.495e-23 Identity = 12/27 (44.44%), Postives = 18/27 (66.67%), Query Frame = 2 Query: 2 RQMVSIQGDPPQRIAAYMVEGLAARMA 82 R+ VS GDP +R+A Y E L+ R++ Sbjct: 243 RESVSELGDPTERVAFYFTEALSNRLS 269
BLAST of FC930832 vs. ExPASy Swiss-Prot
Match: SCL26_ARATH (Scarecrow-like protein 26 OS=Arabidopsis thaliana GN=SCL26 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.006e-22 Identity = 60/175 (34.29%), Postives = 103/175 (58.86%), Query Frame = 3 Query: 132 SDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIAS--LPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVTPSMLECRLGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDM 650 +D ++A ++L + P FG++ A AI+EA K E+R+HI+D+DIN+G Q+ +L+Q + S + HLR+T + + ++ V +Q G RL + A+++G PF + T+ + S L+ GEA+V+N + H+P S T + L K+LNPKLVT+V +++ Sbjct: 178 ADVISAFELLQNMSPYVNFGYLTATQAILEAVKYERRIHIVDYDINEGVQWASLMQALVSRNTGPSAQHLRITALSRATNGKKSVAAVQETGRRLTAFADSIGQPFSYQHCKLDTNAFSTSSLKLVRGEAVVINC---MLHLPRFSHQTPSSVISFLSEAKTLNPKLVTLVHEEV 349
BLAST of FC930832 vs. ExPASy Swiss-Prot
Match: SCR_PEA (Protein SCARECROW OS=Pisum sativum GN=SCR PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.598e-22 Identity = 71/193 (36.79%), Postives = 99/193 (51.30%), Query Frame = 3 Query: 75 AWLPLASFSKALKCKEPPSSDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVTPSMLECRLGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDMN 653 A LP++S + P + +A Q+ + P KF AN AI EAF+ E+RVHIID DI QG Q+ L +AS PG P++RLTG+ L+ G RL A LG+PFEF V K + L EA+ V++ H + D + S N L +++ L PK+VTVVEQD++ Sbjct: 508 ATLPVSSHT-------PHNQKVASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMET------LEATGKRLSDFANKLGLPFEFFPVAEKVGNIDVEKLNVSKSEAVAVHWL--QHSLYDVTGSDTN----TLWLLQRLAPKVVTVVEQDLS 681 HSP 2 Score: 25.0238 bits (53), Expect = 1.598e-22 Identity = 10/22 (45.45%), Postives = 15/22 (68.18%), Query Frame = 2 Query: 23 GDPPQRIAAYMVEGLAARMAAS 88 G QR+AAY E ++AR+ +S Sbjct: 481 GTSAQRVAAYFSEAISARLVSS 502
BLAST of FC930832 vs. ExPASy Swiss-Prot
Match: SCR_IPONI (Protein SCARECROW OS=Ipomoea nil GN=SCR PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.521e-22 Identity = 67/170 (39.41%), Postives = 91/170 (53.53%), Query Frame = 3 Query: 144 AAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVTPSMLECRLGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDMN 653 +A Q+ + P KF AN AI EAF+ E RVHIID DI QG Q+ L +AS PG P +RLTG+ + L+ G RL A+ LG+PFEF V K + P L EA+ V++ H + D + S N L +++ L PK+VTVVEQD++ Sbjct: 495 SAFQVFNGISPFVKFSHFTANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPLVRLTGLGTS------MEALEATGKRLSDFAQKLGLPFEFFPVADKVGNLDPQRLNVNKREAVAVHWL--QHSLYDVTGSDTN----TLWLLQRLAPKVVTVVEQDLS 652 HSP 2 Score: 23.8682 bits (50), Expect = 3.521e-22 Identity = 10/22 (45.45%), Postives = 14/22 (63.64%), Query Frame = 2 Query: 23 GDPPQRIAAYMVEGLAARMAAS 88 G QR+AAY E ++AR+ S Sbjct: 451 GTSAQRVAAYFSEAMSARLVNS 472 The following BLAST results are available for this feature:
BLAST of FC930832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930832 ID=FC930832; Name=FC930832; organism=Citrus clementina; type=EST; length=723bpback to top |