FC930832
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930832 vs. ExPASy Swiss-Prot
Match: SCL23_ARATH (Scarecrow-like protein 23 OS=Arabidopsis thaliana GN=SCL23 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.359e-19 Identity = 61/171 (35.67%), Postives = 84/171 (49.12%), Query Frame = 3 Query: 144 AAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKT-SLVTPSMLECRLGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDMN 653 +A+Q V P KF AN AI +A GE VHIID D+ QG Q+ L +AS P +R+TG + L G RL A +L +PFEFH + +L+ PS L R GEA+VV H M + L +++ L P L+TVVEQ+++ Sbjct: 119 SALQTYNSVSPLIKFSHFTANQAIFQALDGEDSVHIIDLDVMQGLQWPALFHILASRPRKLRSIRITGFGSSSDL------LASTGRRLADFASSLNLPFEFHPIEGIIGNLIDPSQLATRQGEAVVV------HWMQHRLYDVTGNNLETLEILRRLKPNLITVVEQELS 277
BLAST of FC930832 vs. ExPASy Swiss-Prot
Match: SCL28_ARATH (Scarecrow-like protein 28 OS=Arabidopsis thaliana GN=SCL28 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.319e-19 Identity = 64/203 (31.53%), Postives = 103/203 (50.74%), Query Frame = 3 Query: 147 AMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVTPSMLECRLGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDMN-----------TTLPHFSQVY*SYITILCVESLM 722 A++ L +V P KF AN ++ AF+G++RVHIIDFDI QG Q+ + Q++AS H+R+TG+ + + L G RL AEA+ + FEFH V + V ML + GE++ VN Q+H + + L +++S NP + + EQ+ +L ++S ++ + T L +SLM Sbjct: 354 ALRFLNQVTPIPKFIHFTANEMLLRAFEGKERVHIIDFDIKQGLQWPSFFQSLASRINPPHHVRITGIGESKL------ELNETGDRLHGFAEAMNLQFEFHPVVDRLEDVRLWMLHVKEGESVAVNCVMQMHKTLYDGTGAAIR--DFLGLIRSTNPIALVLAEQEAEHNSEQLETRVCNSLKYYSAMFDAIHTNLATDSLM 548
BLAST of FC930832 vs. ExPASy Swiss-Prot
Match: SCL30_ARATH (Scarecrow-like protein 30 OS=Arabidopsis thaliana GN=SCL30 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 5.918e-18 Identity = 57/179 (31.84%), Postives = 84/179 (46.93%), Query Frame = 3 Query: 135 DRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVTPSMLECRLGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDMNTTLPHF 671 D L A + + CP + AN I E +HIIDF I G Q+ LIQ ++ P LR+TG++ P+S R ++ G RL+ + VPFE+ + +T L GE VVN +L + PDE+VS + RD L++ + +NP L E + P F Sbjct: 280 DILKAYKGFVQACPTLIMCYFTANRTINELASKATTLHIIDFGILYGFQWPCLIQALSKRDIGPPLLRVTGIELPQSGFRPSERVEETGRRLKRFCDKFNVPFEYSFIAKNWENITLDDLVINSGETTVVNCILRLQYTPDETVSLNSPRDTALKLFRDINPDLFVFAEINGTYNSPFF 458 HSP 2 Score: 21.9422 bits (45), Expect = 5.918e-18 Identity = 10/29 (34.48%), Postives = 15/29 (51.72%), Query Frame = 2 Query: 2 RQMVSIQGDPPQRIAAYMVEGLAARMAAS 88 R+ S GD QR+ + E L AR+ + Sbjct: 236 REHSSRHGDATQRLGYHFAEALEARITGT 264
BLAST of FC930832 vs. ExPASy Swiss-Prot
Match: SCL9_ARATH (Scarecrow-like protein 9 OS=Arabidopsis thaliana GN=SCL9 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.170e-17 Identity = 56/175 (32.00%), Postives = 89/175 (50.86%), Query Frame = 3 Query: 102 KALKCKEPPSSDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVTPSMLECRLGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKL 626 K + K ++ L A Q+ CP K + N I + +RVH+IDF I G Q+ TLI S+ G+ P +R+TG++ P+ R ++ G RL + A+ GVPFE+ A+ K + L+ E VVN ++ ++ DESV + RD +L ++ +NP L Sbjct: 405 KGIVSKPRSAAAVLKAHQLFLACCPFRKLSYFITNKTIRDLVGNSQRVHVIDFGILYGFQWPTLIHRF-SMYGS-PKVRITGIEFPQPGFRPAQRVEETGQRLAAYAKLFGVPFEYKAIAKKWDAIQLEDLDIDRDEITVVNCLYRAENLHDESVKVESCRDTVLNLIGKINPDL 577
BLAST of FC930832 vs. ExPASy Swiss-Prot
Match: SHR_ARATH (Protein SHORT-ROOT OS=Arabidopsis thaliana GN=SHR PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.834e-17 Identity = 57/170 (33.53%), Postives = 93/170 (54.71%), Query Frame = 3 Query: 165 EVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTG-------VDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVTPSM--LECRLGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQD 647 EV P FG +AANGAI+EA GE ++HI+D +Q+ TL++ +A+ + PHLRLT V+D + R+ ++ IG R+E A +GVPF+F+ + L + L+ + E L +N +H + S + RD ++ + L P++VTVVE++ Sbjct: 230 EVSPWATFGHVAANGAILEAVDGEAKIHIVDISSTFCTQWPTLLEALATRSDDTPHLRLTTVVVANKFVNDQTASHRM---MKEIGNRMEKFARLMGVPFKFNIIHHVGDLSEFDLNELDVKPDEVLAINCVGAMHGI----ASRGSPRDAVISSFRRLRPRIVTVVEEE 392
BLAST of FC930832 vs. ExPASy Swiss-Prot
Match: SCL32_ARATH (Scarecrow-like protein 32 OS=Arabidopsis thaliana GN=SCL32 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.314e-17 Identity = 62/193 (32.12%), Postives = 100/193 (51.81%), Query Frame = 3 Query: 126 PSSDRLAAMQIL-----FEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIAS-LPGNRPHLRLTGVDDPESVQRLVG-GLQIIGLRLESLAEALGVPFEFHAVPSKTSLVTPSMLE------CRLGEALVVNFAFQLHHMPDESV--STVNQRDQLLRMVKSLNPKLVTVVEQDMNTT 659 P +D L ++ ++ P +FGF+AAN AI+ A +G VHI+D + Q TLI +AS L P L+LT V + + + +G +L + A + EF VPS S S+L+ EALVVN L ++P+E + S+ + R L+ ++SLNP++VT++E+D++ T Sbjct: 94 PQADELHRFSVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDLSLTHCMQIPTLIDAMASRLNKPPPLLKLTVVSSSDHFPPFINISYEELGSKLVNFATTRNITMEFTIVPSTYSDGFSSLLQQLRIYPSSFNEALVVNCHMMLRYIPEEPLTSSSSSLRTVFLKQLRSLNPRIVTLIEEDVDLT 286
BLAST of FC930832 vs. ExPASy Swiss-Prot
Match: SHR1_ORYSI (Protein SHORT-ROOT 1 OS=Oryza sativa subsp. indica GN=SHR1 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 9.116e-15 Identity = 54/178 (30.34%), Postives = 87/178 (48.88%), Query Frame = 3 Query: 165 EVCPCFKFGFMAANGAIIEAF--------KGEKRVHIIDFDINQGSQYITLIQTIASLPGNR-PHLRLTGV------DDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVTPSM--LECRLGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQD 647 E+ P FG +AANGAI+E+F +R HI+D +Q+ TL++ +A+ + PHL +T V +VQR+ ++ IG R+E A +GVPF F AV L + L+ R G A ++ + +RD ++ L+P++VTVVE++ Sbjct: 277 ELSPWSSFGHVAANGAILESFLEVAAAASSETQRFHILDLSNTFCTQWPTLLEALATRSADETPHLSITTVVSAAPSAPTAAVQRV---MREIGQRMEKFARLMGVPFRFRAVHHSGDLAELDLDALDLREGGATTALAVNCVNSLRGVVPGRARRRDAFAASLRRLDPRVVTVVEEE 451 HSP 2 Score: 31.9574 bits (71), Expect = 9.116e-15 Identity = 13/30 (43.33%), Postives = 22/30 (73.33%), Query Frame = 2 Query: 5 QMVSIQGDPPQRIAAYMVEGLAARMAASGK 94 ++ S GD Q++A+Y ++GL AR+ ASG+ Sbjct: 220 ELASPYGDVEQKLASYFLQGLFARLTASGQ 249
BLAST of FC930832 vs. ExPASy Swiss-Prot
Match: SHR1_ORYSJ (Protein SHORT-ROOT 1 OS=Oryza sativa subsp. japonica GN=SHR1 PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 1.184e-14 Identity = 54/178 (30.34%), Postives = 87/178 (48.88%), Query Frame = 3 Query: 165 EVCPCFKFGFMAANGAIIEAF--------KGEKRVHIIDFDINQGSQYITLIQTIASLPGNR-PHLRLTGV------DDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVTPSM--LECRLGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQD 647 E+ P FG +AANGAI+E+F +R HI+D +Q+ TL++ +A+ + PHL +T V +VQR+ ++ IG R+E A +GVPF F AV L + L+ R G A ++ + +RD ++ L+P++VTVVE++ Sbjct: 277 ELSPWSSFGHVAANGAILESFLEVAAAASSETQRFHILDLSNTFCTQWPTLLEALATRSADETPHLSITTVVSAAPSAPTAAVQRV---MREIGQRMEKFARLMGVPFRFRAVHHSGDLAELDLDALDLREGGATTALAVNCVNSLRGVVPGRARRRDAFAASLRRLDPRVVTVVEEE 451 HSP 2 Score: 31.5722 bits (70), Expect = 1.184e-14 Identity = 13/29 (44.83%), Postives = 21/29 (72.41%), Query Frame = 2 Query: 5 QMVSIQGDPPQRIAAYMVEGLAARMAASG 91 ++ S GD Q++A+Y ++GL AR+ ASG Sbjct: 220 ELASPYGDVEQKLASYFLQGLFARLTASG 248
BLAST of FC930832 vs. ExPASy Swiss-Prot
Match: SCL18_ARATH (Scarecrow-like protein 18 OS=Arabidopsis thaliana GN=SCL18 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.246e-14 Identity = 62/198 (31.31%), Postives = 98/198 (49.49%), Query Frame = 3 Query: 159 LFEVCPCFKFGFMAANGAIIEAFKGEKR--VHIIDFDINQGSQYITLIQTIASLPGN----RPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVTPSMLECRL-------GEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDMN----TTLPHFSQVY*SYITI 701 L ++ P +FG + AN AI++A + +HI+D DI+QG Q+ L+Q +A N P LR+TG R V GL G RL A++LG+ F+FH + + +L+ RL GE + VN LH + ++ + L +KSLN ++VT+ E++ N + L FS+ Y+ I Sbjct: 149 LNQLTPFIRFGHLTANQAILDATETNDNGALHILDLDISQGLQWPPLMQALAERSSNPSSPPPSLRITGCG------RDVTGLNRTGDRLTRFADSLGLQFQFHTLVIVEEDLAGLLLQIRLLALSAVQGETIAVNCVHFLHKIFNDDGDMIG---HFLSAIKSLNSRIVTMAEREANHGDHSFLNRFSEAVDHYMAI 337
BLAST of FC930832 vs. ExPASy Swiss-Prot
Match: SHR2_ORYSJ (Protein SHORT-ROOT 2 OS=Oryza sativa subsp. japonica GN=SHR2 PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 3.552e-13 Identity = 58/195 (29.74%), Postives = 86/195 (44.10%), Query Frame = 3 Query: 165 EVCPCFKFGFMAANGAIIEAF-------------------KGEKRVHIIDFDINQGSQYITLIQTIASLPGN-RPHLRLTGVDD---PESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVTPSMLECRLGE-----ALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDMNTTLP 665 E+ P FG +AANGAI+E+F R+HI+D +Q+ TL++ +A+ + PHL +T V P + + V ++ IG RLE A +GVPF F AV L + L E AL VN L RD + ++ L P++VTVVE++ + P Sbjct: 273 ELSPWTPFGHVAANGAILESFLEAAAAGAAASSSSSSSSSTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSITTVVPTAAPSAAAQRV--MREIGQRLEKFARLMGVPFSFRAVHHSGDLADLDLAALDLREGGATAALAVNCVNALR-------GVARGRDAFVASLRRLEPRVVTVVEEEADLAAP 458 HSP 2 Score: 30.0314 bits (66), Expect = 3.552e-13 Identity = 12/29 (41.38%), Postives = 20/29 (68.97%), Query Frame = 2 Query: 5 QMVSIQGDPPQRIAAYMVEGLAARMAASG 91 ++ S GD Q++A+Y ++GL AR+ SG Sbjct: 216 ELASPYGDVDQKLASYFLQGLFARLTTSG 244 The following BLAST results are available for this feature:
BLAST of FC930832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930832 ID=FC930832; Name=FC930832; organism=Citrus clementina; type=EST; length=723bpback to top |