FC930835

Overview
NameFC930835
Unique NameFC930835
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length693
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_PHOPR (Anthranilate phosphoribosyltransferase OS=Photobacterium profundum GN=trpD PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.468e-23
Identity = 62/153 (40.52%), Postives = 87/153 (56.86%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 670
            E+ D L ++  LT+ E+    D ++  + D  L+SA L  L+ KGET  EI G A A++  A        D  DIVGTGGDGANT+NIST A+ +AAACG KVAK             D+L+  G+ + + PE  R  +DE G+ F+ + +YH
Sbjct:   10 EIADKLYAQQALTQDESHVLFDAIIKGDVDPILLSAVLTALKIKGETPAEIAGAASALLANANAFPSPEYDFADIVGTGGDGANTINISTTAAFVAAACGVKVAKHGNRGVSSKSGSSDLLDKFGINLAMTPENARGALDELGVCFLFAPEYH 162          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_METKA (Anthranilate phosphoribosyltransferase OS=Methanopyrus kandleri GN=trpD PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.468e-23
Identity = 63/158 (39.87%), Postives = 90/158 (56.96%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            +++ +I   DL   EA+  +  ++  E  +  ++  LV LR KG T  E+VG    M+++A KV+  +   VD  GTGGD  +T N ST A + AAA G  VAK             D+LEALGV I+ DP+ V+RC++E G GFM + K+HP MK V
Sbjct:    3 VLERIIRGSDLDREEARDLMCRIVGGELSDVEVAGILVALRCKGYTSEELVGFVDGMMEHAVKVDPDVERLVDTAGTGGDELDTFNASTLAGLTAAAAGVPVAKHGNRSVTSECGSADILEALGVNIEADPDTVKRCIEEVGFGFMFAPKFHPAMKNV 160          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_DESOH (Anthranilate phosphoribosyltransferase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=trpD PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.468e-23
Identity = 63/160 (39.38%), Postives = 86/160 (53.75%), Query Frame = 2
Query:  212 FNELIDCLISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAV-DIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKF 685
            F++ +  +I+R DL+  E      D       +A I AF+  L  KGETF E+ G A AM + AT+++     V D  GTGGDGA+T NIST ++ + A  G  VAK             DVLEALGV +D  PE     V+E GIGF+ +  +H  MK+
Sbjct:    2 FSQTLSKIINRKDLSREEMDRIFSDIFSGNLTDAQIGAFMAALATKGETFEELAGAAEAMRRKATRIQAASPVVVDTCGTGGDGAHTFNISTTSAFVVAGAGICVAKHGNRSVSSKCGSADVLEALGVKLDTQPEVAEEAVNEIGIGFLFAPLFHGAMKY 161          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_AZOVD (Anthranilate phosphoribosyltransferase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=trpD PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.468e-23
Identity = 62/149 (41.61%), Postives = 84/149 (56.38%), Query Frame = 2
Query:  242 RVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMK 682
            R+DL  AE Q  +  ++  +  +A I AFL+ +R K E+  EIVG A  M + A  V  G+   VD  GTGGDG N  N+ST A+ + AA G +VAK             D+LEA GV ++L PE V RCV+  G+GFM +  +H  MK
Sbjct:   13 RLDLNTAEMQGVMRQIMTGQCSDAQIGAFLMGMRMKSESIDEIVGAALVMRELAAPVTIGVERLVDTCGTGGDGMNIFNVSTAAAFVVAAAGGRVAKHGNRAVSGKSGSADLLEAAGVYLELSPEQVARCVESVGVGFMFAPAHHGAMK 161          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_ALKMQ (Anthranilate phosphoribosyltransferase OS=Alkaliphilus metalliredigens (strain QYMF) GN=trpD PE=3 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.468e-23
Identity = 65/158 (41.14%), Postives = 85/158 (53.80%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKF 685
            + ID +I R DL E E  A +  ++  +  ++ I  FL  LR KGET  EI   A+ M   A  VE     ++D  GTGGD ANT NIST  + +AAA G  V K             DVLE LGV IDL P+ V  CV++  +GFM + K+H  MK+
Sbjct:    4 QAIDKVIRRQDLAETEMMAVMQGIMEGKVTDSQIGGFLTALRMKGETVEEITASAKVMRSKALVVEVNQPHSIDTCGTGGDQANTFNISTAVAFVAAAAGVTVVKHGNRSVSSQCGSADVLEKLGVNIDLTPKQVETCVEQVNMGFMFAPKFHQAMKY 161          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_HALLT (Anthranilate phosphoribosyltransferase OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=trpD PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.223e-23
Identity = 62/159 (38.99%), Postives = 86/159 (54.09%), Query Frame = 2
Query:  215 NELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            N+ ++ +    DLT  EA+ +   +  EA EA I A L  LRAKGET  EI G A+ M   A  +E   +  VD  GTGGD  +T+N+ST A+I+AA  G  +AK             DVLE  G  ++ +P  V   ++  GIGFM++  +HP MK V
Sbjct:    4 NDTVERVTDGADLTVDEAREAARLVFEEATEAQIGALLAALRAKGETEAEIAGFAQGMRDAARTIEPDREPLVDTCGTGGDDYDTINVSTTAAIVAAGAGVPIAKHGNYSVSSSSGSADVLEVAGADVEAEPPAVEEAIETDGIGFMLAPVFHPAMKAV 162          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_GEOKA (Anthranilate phosphoribosyltransferase OS=Geobacillus kaustophilus GN=trpD PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.223e-23
Identity = 57/145 (39.31%), Postives = 85/145 (58.62%), Query Frame = 2
Query:  251 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMK 682
            LTE EA A+++ +++ EA ++ I++ L +LR +GET  E+VG  RAM    T +E   D +D  GTGGDGA T N+ST A+I+ ++ G KVAK             DVLE LG+ I   P   ++ ++  G+ F+ +  YH  MK
Sbjct:   15 LTEDEAYAAMNIIMSGEATDSQIASLLSMLRLRGETVDELVGFVRAMRDRMTAIEASDDVIDTCGTGGDGAATFNVSTAAAIVISSLGVKVAKHGNRAVSSKSGSADVLERLGIDIQTSPSAAKQALETKGLAFLFAPLYHAAMK 159          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_XANOP (Anthranilate phosphoribosyltransferase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=trpD PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.210e-23
Identity = 69/168 (41.07%), Postives = 94/168 (55.95%), Query Frame = 2
Query:  197 PLTPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD---AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            P+TP   E +   I   ++   E    +  ++  E  + +++A L  LR K ET GEI G A  M +++ +V+ + D    VDIVGTGGDG++T NIST A  +AAA GAKVAK             D LEALG VI+L PE V   + + GIGFM +  +HP MK V
Sbjct:    2 PITP--QEALQRTIEHREIFHDEMVGLMRQIMRGEVSDMMVAAILTGLRVKKETIGEIAGAATVMREFSRRVD-VSDHQHMVDIVGTGGDGSHTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSGSADALEALGAVIELQPEQVADALAQTGIGFMYAPLHHPSMKVV 166          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_XANOM (Anthranilate phosphoribosyltransferase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=trpD PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.210e-23
Identity = 69/168 (41.07%), Postives = 94/168 (55.95%), Query Frame = 2
Query:  197 PLTPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD---AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            P+TP   E +   I   ++   E    +  ++  E  + +++A L  LR K ET GEI G A  M +++ +V+ + D    VDIVGTGGDG++T NIST A  +AAA GAKVAK             D LEALG VI+L PE V   + + GIGFM +  +HP MK V
Sbjct:    2 PITP--QEALQRTIEHREIFHDEMVGLMRQIMRGEVSDMMVAAILTGLRVKKETIGEIAGAATVMREFSRRVD-VSDHQHMVDIVGTGGDGSHTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSGSADALEALGAVIELQPEQVADALAQTGIGFMYAPLHHPSMKVV 166          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_GEOUR (Anthranilate phosphoribosyltransferase OS=Geobacter uraniireducens (strain Rf4) GN=trpD PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.210e-23
Identity = 63/167 (37.72%), Postives = 88/167 (52.69%), Query Frame = 2
Query:  233 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE---------------GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKF 685
            ++ R DLTE+E    +D +++ EA  A I+AF+  LR KGET  EI G AR M    T++                 L   +D  GTGG   NT N+ST  + + +ACG KVAK             DVLE+LGV +D+  E + RC++E GIGF+ +   H  MK+
Sbjct:    9 VVEREDLTESEMIQVMDQVMSGEATPAQIAAFITALRMKGETVAEITGAARVMRDKVTRIRVGKNILDMDRDDINVDLETILDTCGTGGSCTNTFNVSTTVAFVVSACGVKVAKHGNRSVSSACGSADVLESLGVNLDVTQETIERCINEIGIGFLFAPALHGAMKY 175          
The following BLAST results are available for this feature:
BLAST of FC930835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_PHOPR2.468e-2340.52Anthranilate phosphoribosyltransferase OS=Photobac... [more]
TRPD_METKA2.468e-2339.87Anthranilate phosphoribosyltransferase OS=Methanop... [more]
TRPD_DESOH2.468e-2339.38Anthranilate phosphoribosyltransferase OS=Desulfoc... [more]
TRPD_AZOVD2.468e-2341.61Anthranilate phosphoribosyltransferase OS=Azotobac... [more]
TRPD_ALKMQ2.468e-2341.14Anthranilate phosphoribosyltransferase OS=Alkaliph... [more]
TRPD_HALLT3.223e-2338.99Anthranilate phosphoribosyltransferase OS=Halorubr... [more]
TRPD_GEOKA3.223e-2339.31Anthranilate phosphoribosyltransferase OS=Geobacil... [more]
TRPD_XANOP4.210e-2341.07Anthranilate phosphoribosyltransferase OS=Xanthomo... [more]
TRPD_XANOM4.210e-2341.07Anthranilate phosphoribosyltransferase OS=Xanthomo... [more]
TRPD_GEOUR4.210e-2337.72Anthranilate phosphoribosyltransferase OS=Geobacte... [more]

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Properties
Property NameValue
Genbank descriptionC34109E09EF PostHarvP1 Citrus clementina cDNA clone C34109E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930835 ID=FC930835; Name=FC930835; organism=Citrus clementina; type=EST; length=693bp
GAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCT
CTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTT
CGAAACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAGAATT
AACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTC
TAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGAT
TTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGC
TGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAG
AAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCT
ACGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGG
TGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTG
CAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCT
GCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTT
GGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCA
TGATGTCGACAAAGTATCACCCCTGCATGAAGTTTGTCAGGCC
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